ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3474298 | LNCAP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◣ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

RAB37
NUF2
UBC
KCNJ15
TTLL1
WDR74
CCDC130
MTRNR2L2
DCP1A
RERE
LOC102724265
HTR5A
TTLL12
ITGB3BP
EFCAB7
BSDC1
RABGAP1
GBA
NPAS4
MTRNR2L8
STX16
SLC24A1
PDE4DIP
SLC44A1
PCDH1
DRG2
ZNF623
FAM207A
COMMD2
ZFP30
PEX3
ADAT2
FAM72C
FAM72D
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
ZNF76
CADPS
GNAL
NWD1
APRT
POLE4
TARS2
RAD54L2
EIF2D
YTHDC2
TRIM9
SLC44A2
MTF2
GTF2H2
SSBP1
ZNF670
SUB1
FAM227B
DTWD1
ATP1A1
GALK2
COPS2
SF3A3
PSMF1
INTS5
NRF1
CABIN1
BCL9
WDR11
SCRT2
PDE7B
DOCK7
IPO4
SAMD4B
SRRM3
ALG10B
PGBD2
NDUFS3
KBTBD4
PRMT5
FUT8
NSFL1C
MRPL16
DNAJC22
RBBP5
FAM72A
TRIM29
INTS12
GSTCD
TPM1
STX18
METAP1D
TRIP4
CCNC
STX6
MFAP3L
DCAF10
FOXO1
GEMIN5
AURKAIP1
WDFY1
FAM72B
VPS13D
NTSR2
DMAP1
NDUFS7
ATP5MC2
TRAM1
RGPD5
RGPD6
GLTPD2
PDE11A
HMGB1
USPL1
GABPB2
LRRC37A3
DNAJC25-GNG10
DNAJC25
RPS14
B4GALT7
EEF2K
LRRC59
RPL27
USP30
SEC13
ANKRD40
ZNF205
GTF2H2C_2
GTF2H2C
TATDN3
NSL1
RGPD1
RGPD2
EXD2
DPY19L4
TMEM41A
C10orf88
TVP23B
ATPAF1
DRAM1
HMOX1
MED23
UIMC1
OPA1
NFAT5
RPS29
SLC33A1
SLC39A13
HERC3
PYURF
PIGY
PRELID3B
ATR
NEUROD4
DSTYK
PPA2
BARHL1
DYNC1LI2
JMJD1C
REEP3
RBBP8NL
MNAT1
LRRC10B
RNF24
WDR36
TUBGCP3
MTHFD2L
BCAR3
MRPL3
ANKRD46
PRRG2
NOSIP
TSNAX
TOR1AIP1
TMED1
MKRN2
TACO1
SNRPB
CEP135
PDE4C
TPBGL
AKAP13
KMT2A
CPLX2
REXO4
RHOT2
RRP15
TCF3
TEFM
DRAP1
C11orf68
SPATC1L
DLG2
CBX1
ISM1
TRIM16L
ZNF829
ZNF568
POLR2C
CCDC200
TMEM259
MFAP3
FAM114A2
PPFIBP2
AGK
TRMT61B
DYNC1I1
DUSP6
AQR
C16orf89
DHTKD1
TMEM39B
GRPEL2
ZNF438
EIF3F
TCF7L2
CHD1L
ALKBH3
CDC73
PRKAB2
BRF2
CYREN
PAXBP1
MAPK1IP1L
ZER1
YPEL1
DCLRE1B
AP4B1
GNB2
ZNF354B
EPS8
HUS1
CRLF3
RNF149
PPIP5K2
ZMIZ2
DHX8
PDS5A
ANXA11
GTF3C3
ZNF527
UTP11
XKR8
STRBP
NME1
TMEM43
CHCHD4
LAMP1
GUSB
TOP3B
IQSEC3
EP400
CREG2
TMPRSS11F
FRG1
CCDC107
MRPL44
SDHAF3
DDX1
CLK3
GTF2H4
TMA16
CIAO3
DAG1
ZNF697
RPL37
INO80C
FAM98B
UBA52
SUPT4H1
DPH6
CLUAP1
WWOX
CALM1
RBM39
NRG3
KRTAP10-7
LUC7L2
FMC1-LUC7L2
CCAR2
TBL3
WIZ
CAPS2
USP54
CTNNB1
YJU2
IRF9
ZNF621
IGSF9
MED12L
DUS1L
TSPAN10
NPLOC4
RSAD1
WDR31
ABCA3
PLEC
RPS7
MTERF4
ATP5MPL
C10orf95
PSEN2
TDP2
ACOT13
TTC26
ZNF286A
BLOC1S5
ANKRD52
FRMD5
SMARCD2
SLC25A51
NOTCH2
FUT10
RPL6
JOSD2
PTPN11
RAPH1
ZMYM3
PPP6R1
TMEM222
ILF2
ANKRD36
SNX19
FNTB
FXN
FAM162A
CCDC58
PYM1
C9orf152
TTC32
GTPBP3
TMEM68
TGS1
ADRM1
EPRS1
ANO8
LPCAT4
TNFAIP3
FECH
ZSCAN22
LUC7L
ZNF557
TBCD
RILP
C8orf37
SELENOT
SEC22B
TDRD7
SFT2D2
SQSTM1
FRAT1
MGAT4B
SNRPB2
B3GLCT
CFAP36
VWC2L
SNAPC2
CLDN8
NDUFB3
FAM126B
TRMT5
SLC38A6
COG2
MAD1L1
FAF1
FAR1
KMT2C
MYO9B
HAUS8
HOXB9
SUPT7L
SLC4A1AP
KANSL3
SESN1
CEP57L1
FAM71E1
EMC10
CFAP45
C17orf75
CYP51A1
FZD1
DPH7
PLK1
TMCO1
RASA2
CLN6
LTB4R2
LTB4R
CIDEB
CAPN2
CEP72
TMEM242
VPS13B
TMEM18
MRPL55
RNF7
FKTN
NAA60
IRF5
C11orf52
PRR15L
MAPRE2
RBBP9
MRPL21
IGHMBP2
SLTM
SNRPE
SAYSD1
ERI1
NUP155
SMPD2
PPIL6
DPP9
DNAJC11
SLC9A1
LARS2
HMGN4
YIPF2
TIMM29
ZNF891
ZNF10
RBPJ
ZNF721
PIGG
TPR
ODR4
CGGBP1
C3orf38
USP22
TJP3
RNF11
POGK
ACKR3
ROCK2
CASZ1
ADAM22
ATXN2L
C5orf49
C7orf25
EIF3G
RNF145
NAXE
MTR
DISP1
MRPL38
WDR41
BPTF
ZNF197
CCDC112
ASCL5
TBC1D19
FAM133B
NCOA7
AARS2
CYB561D1
DDX46
KDM3B
HES3
HARS2
HARS1
RARS1
FAM3C
MFSD4B
PLAGL1
RGL1
MKRN3
ZBTB26
AQP4
HPCAL4
PHKG1
FRA10AC1
SLC39A3
RABIF
SNX18
ZNF33A
CITED2
SLC37A4
DLC1
ACO1
NOMO3
CACNA1E
METTL9
TIPARP
CCDC174
EXOC2
SIKE1
TMEM248
ZNF879
MRPL34
NPL
TP53I3
ADPRHL1
SPATA22
KRTAP12-2
MRPL1
RBM28
NDUFAB1
TBPL1
SYT7
NSUN3
DHFR2
SPAG8
SCOC
IAH1
CASC3
NMNAT1
LZIC
RBL1
PLEKHM1
ZNF582
ZNF484
CRNKL1
CFAP61
CD8A
BNIP1
MGST3
ATG16L1
WASHC5
NSMCE2
FOXN3
MT1X
PABPC4
LRRC37B
DGKZ
KNL1
CLUL1
COIL
VPS25
PRR14
ASB6
WDR7
MRPS22
GALNT10
GUF1
NHSL1
BIN1
AASDH
EDC4
VAMP4
B3GAT2
LRP11
FGFBP3
RALBP1
ZC3H6
BOLA2
SLX1B
SLX1A
BOLA2B
BOLA2-SMG1P6
ZNF354C
SIGIRR
YWHAZ
MAP3K13
UTP3
RNF6
ZNF529
ZNF350
ZRANB2
AJUBA
TET3
XYLB
C1orf115
FRMPD1
CYP4B1
DHX16
PET117
KAT14
ZNF331
GGCX
FBXO22
ARHGAP22
SECISBP2
BARX2
PUM1
COX16
MRPS31
POLR3E
ZNF839
ZNF219
DUSP4
BTBD11
MRPL40
HIRA
MRPS18C
HELQ
FAM228B
HNRNPD
SF3B6
COX7A2
TIMM9
KIAA0586
BACH2
TNFAIP1
IFT20
DISC1
NUDT7
PDAP1
BUD31
GPCPD1
SLC16A1
C3orf80
TSNARE1
SPOCK1
TRIM8
ASL
FAM124A
C18orf21
PTPN4
TRAF6
RAG1
FKBP5
PSMA1
ARAP1
FAM50B
VPS28
SAXO1
RRAGA
NOP56
ZSCAN9
SPCS1
GLT8D1
ANKRD62
TSFM
NDUFC2-KCTD14
NDUFC2
PDE8A
IBA57
VPS4A
VANGL1
MSL2
DEF6
CHD9
MALL
HSPE1-MOB4
HSPE1
HSPD1
MDM4
WDR43
KLHL20
ZNF609
CRKL
DNAJC24
DCDC1
TAMM41
C19orf53
EPB41L5
NDUFA2
IK
CCDC69
YIPF4
ZNF77
TUT1
POLG
MDC1
FITM2
ARHGEF12
ZGRF1
LARP7
L3HYPDH
JKAMP
ERCC4
HASPIN
SDK1
ZNF232
RUFY1
ZFYVE19
DNAJC17
LIMD1
PAG1
JAK1
NUP54
GCFC2
ZNF383
ITM2C
ZNHIT3
NUFIP2
NLRX1
FAM47E
CPE
MARCHF11
TLL2
FAM151B
FAM47E-STBD1
ELMO2
YPEL3
SNX16
DNAJB12
NBN
SNX17
EIF2B4
COMMD6
UCHL3
ERMP1
FOXRED2
PRKN
PACRG
IGFBP3
ISM2
CELF1
LINGO1
TXNDC15
DNAJC1
STK10
HAUS5
IPO9
SMKR1
PRPF18
CRBN
CYP20A1
ZNF554
PDSS2
INAFM2
GTDC1
PDHB
RNF43
GDPD1
GFUS
TBCCD1
CHRNB2
CD300LG
RNF223
CPPED1
MEMO1
KCTD5
PRMT3
GCLM
BORCS7
VPS37D
PKIG
DDX23
SPTLC2
SMC6
GEN1
ATP6V0C
PRRT1B
PPIG
NOP16
HIGD2A
ALG10
NUP107
MIER1
CMC1
CYP2R1
ANGEL2
CFAP410
CEP126
CBFA2T2
SORL1
S100A8
EVPL
PLA2G2C
LRRC26
ZMPSTE24
STAT3
GFM2
WDR70
SARAF
ZNF337
ANKAR
UBA2
MAPK8IP3
LRP12
RNF135
YOD1
TMEM185B
PFKFB2
MRPL30
MITD1
SACM1L
RIF1
NUP214
PSMC1
ZNF746
GABARAPL1
TNFRSF10D
TMEM14A
GINM1
GPAT3
DNMT3B
GCH1
RAB3C
PRKACA
ARHGAP28
RHBDL2
SNAP47
JMJD4
TTC4
TIGD1
EIF4E2
ZZZ3
ZNF165
ARL8B
RETSAT
ELMOD3
WASHC2C
ZNF326
JRK
RGPD8
RANBP3
GDF11
LPIN3
HSD17B4
CREG1
KLKB1
CDK5RAP1
MOB4
CLTB
NOXA1
BANP
LNPEP
HIBADH
PPIH
THOC3
ZNF354A
HEXA
TUBE1
FAM229B
NUDT17
NSG2
ADCK5
OGT
MAF1
ATP23
PKIB
MTG1
ZNF717
CSRP1
COX10
DOP1B
SELENOH
RMND1
ARMT1
MRPS14
ZNF827
PARK7
PRKCSH
CCDC151
BUD13
ATP6V0D1
TMEM106B
RPL10A
PDE4D
RBM17
GTF2IRD2
XRN1
SLC66A3
MON1A
FRMPD2
IGIP
ZNF391
TARS3
DDX41
PPP1R8
H4C8
TOMM20
SRI
C1QBP
SLC25A21
SRGAP1
FLYWCH2
SUDS3
BEND3
MCC
PYGO2
LOC101928120
C4orf48
SORBS3
FMC1
R3HCC1
IPO13
ERLIN2
PRKAG1
FSIP2
IL11RA
SLC22A5
ZNF71
ZNF843
ZNF441
SOCS1
SMPDL3B
MNX1
MAN2C1
RBSN
KCNH1
DSE
HSPA6
ERCC5
USE1
BUB1B
TSKU
PTBP2
DPY19L1
TSPYL4
DST
BEND6
GSX1
UBE2E2
TAF8
ARHGEF26
FAAH
YTHDF2
SOD2
RESF1
UCHL5
RO60
KANSL1
BAZ2A
ANKRD36B
ATP5MF-PTCD1
ATP5MF
TBCE
SPATA4
ARID5B
ADRA1A
LTBR
SCAND1
DDX18
FAM234A
MTOR
ZNF212
DTWD2
EIF5B
KIF22
RNF220
KIF15
KIAA1143
TXNDC9
EDEM2
ZNF585B
HERC5
CDC7
TCAIM
DHRS4L2
BTG1
REXO1
SUCLG2
PCLO
COA8
BAG5
DNAH9
NR1H3
ACP2
STOML2
RPL5
RAD52
ADNP
VPS72
TAS1R1
NOL9
CSTF1
AURKA
ZNF180
DTD1
SEMA6A
CCDC66
SARS2
MRPS12
ERN1
TMEM106C
RGS9
HCN1
MOK
SIAH2
PLA2G10
NAA20
PLEKHM3
C7orf26
TBRG4
AMN1
ATAD2B
CNOT6
HIGD2B
BBS4
KAT7
NDUFA12
FAAP20
TIAL1
PARP16
ATP5F1E
PRMT2
SLC49A4
DAD1
PRKAR2A
FAXC
PRR18
LSG1
RNF187
RPS15
BRIX1
CDK5RAP3
TLCD4
MAP7
TLCD4-RWDD3
IDH3B
LOC100287896
LIPT2
EXO1
NCOA5
ACAD9
LDHD
MAGOH
CIZ1
RINT1