ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: DRX402534 | MYL
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◣ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

YPEL3
TMEM68
TGS1
CCDC200
DUSP6
ZNF562
AURKAIP1
MTRNR2L2
BSDC1
ITGB3BP
EFCAB7
MTRNR2L8
CYP17A1
ARHGAP39
PEX3
ADAT2
DPY19L4
ZMPSTE24
ZNF426
KCNJ15
TMEM242
MED23
NDUFS7
PKMYT1
INTS12
GSTCD
EHD2
DMAP1
EIF1AD
BANF1
ZNF117
PPP5D1
CALM3
ZNF579
FAM207A
WDR74
MRPL1
CCDC97
MTRNR2L9
DCAF10
SF3A3
BRWD1
CBX1
VPS13B
SNX16
ZBTB45
KMT2A
FNTA
NUF2
DRAP1
C11orf68
TMA16
SLC9A1
GSTA4
SPIDR
CCDC130
ACYP2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MAN2C1
TGFBR2
PUM1
FRG1
ZNF623
INTS5
SNIP1
TRIP4
CD33
FOXJ3
TTLL12
CEP85
COX7A2
ZNF529
ST8SIA6
CD47
DCP1A
YJU2
MRPS18C
HELQ
REXO4
COQ3
LYN
SSBP1
VIRMA
MRPL15
TMEM222
COPS7B
NR1H3
ACP2
TIGD1
EIF4E2
TOR1AIP1
SELENOH
DUS1L
ATAD2
RUVBL1
EEFSEC
RPS7
AGK
MTF2
SMG8
MTBP
MRPL13
MRPS31
RFX2
RPS29
DSTYK
NEMF
LARP1B
MTERF4
CASS4
PLEKHM3
SPDYC
RABGAP1
HMGB1
USPL1
TNPO3
LUC7L2
FMC1-LUC7L2
FMC1
PRELID3B
TRMT2A
RANBP1
LMNB2
NMNAT1
LZIC
BAIAP2
MRPL54
APBA3
TFPT
PRPF31
UTP3
METAP1D
DNAJC11
MTIF2
RPL27
FEM1C
PPP6R1
ZSCAN22
RABGGTA
DGAT1
GBA
SUPT7L
SLC4A1AP
GTF3C5
NFX1
GTF3C3
ING2
TACO1
NOXA1
SNRPD3
GUCD1
EXOSC9
FAAH
DRG2
SLC25A28
ARHGEF1
MOB4
GARS1
CARD8
FRA10AC1
TBC1D19
ADRM1
CCAR2
HUS1
PAXBP1
USP30
MTOR
MRPL40
HIRA
R3HCC1
MRPL39
APEH
PGRMC2
STX16
SMG5
COX16
MRPL44
KDM1A
RTTN
TMEM101
TMEM65
PSMG1
PSMD8
RMND1
ARMT1
TRIB1
TMEM41A
TRDMT1
SIRT6
ANKRD24
ZFP41
NBN
DPP9
KMT2D
PIH1D2
NKAPD1
SIGLECL1
OAZ3
ASCC1
ANAPC16
NIBAN3
EIF2D
GTF2H2
RAD54L2
JOSD2
HSPE1-MOB4
HSPE1
HSPD1
RFXANK
BORCS8-MEF2B
BORCS8
CAMTA2
PDCD2
ARHGEF2
RBBP5
GFI1B
TSC1
YBEY
MCM3AP
GTPBP10
UBC
GRWD1
C17orf75
ZNF585A
COMMD2
BCAT2
TOP3B
RPS14
ADPRS
MEMO1
TRAM1
CREM
KDM5C
SMARCD2
MAIP1
TSPAN10
NPLOC4
SEC22C
SS18L2
MRM1
NSFL1C
GTF2H2C_2
GTF2H2C
PARP2
NELFB
ILKAP
C8orf37
POLDIP3
IKZF4
ALG10B
DNAJB12
ZNF391
DDX1
GK5
TRIM27
AXL
FAM227B
DTWD1
MIER1
DISC1
RPS6KA1
ZNF888
POLE4
SLC24A1
CEP120
ZZZ3
ATP5MC3
NSMCE4A
EGR2
RNF139
FXYD5
ZNF302
CHCHD2
UQCC1
FBXO4
EXOG
TMCC1
SKP2
LMBRD2
WDR11
GALK2
GTPBP3
COPS2
CCDC88A
FBXO22
GEMIN7
PRRG2
NOSIP
ANO8
RBIS
ANKRD50
DNAJB2
PEX7
LTBR
STX18
EIF3E
NR1H2
TVP23B
HDAC2
GDI2
RBSN
CLPTM1
ZNF114
FAM3C
EPN1
HGSNAT
TTC32
BMS1
ZNF350
SRSF11
LRRC40
PHACTR4
ZNF16
PPDPFL
WDR36
ZNF846
UBIAD1
ATF4
EFCAB2
PAIP1
PRR19
PAFAH1B3
FES
CARD9
JMJD1C
SLC44A1
REEP3
GTF2H4
CFAP298-TCP10L
CFAP298
RAD52
ARL8B
HAUS4
TOX4
RAB2B
ZNF446
TTI2
NUP54
TAF3
PRKDC
MCM4
SMARCE1
LY6E
NOP16
HIGD2A
MRPL3
HDAC1
CCDC77
KDM5A
PYROXD1
QSOX2
MRPL21
IGHMBP2
FAM228B
SF3B6
PIGW
MYO19
AP4E1
FAM200B
DAB2
SOAT1
FAM133B
PPP4R3B
TFAM
RB1CC1
PGGT1B
CPT2
PTER
HNRNPH1
SPATA5
NUDT6
ELF2
ZNF460
MOB3A
IZUMO4
THAP1
SLC33A1
GRPEL2
RBM28
AAR2
TMEM59
TCEANC2
HLCS
ZNF561
METTL25
CCDC59
CDK5RAP1
ZBTB40
HDAC8
RNF115
POLR3C
IPO4
PRPF18
B4GALT7
SLC39A3
EPS15
FAM83A
CIPC
IPP
ZNF878
RPS20
CCNC
CCNI
HAX1
COA6
ZNF461
NUTF2
CENPT
FAM217B
MAF1
PPP1R3D
ZFP14
TIMM50
STX8
CFAP52
CCNA2
SPATA1
GNG5
TMEM183A
NOC3L
CCZ1B
PLD3
C19orf47
RALGAPA1
UBE2V2
ANKRD54
NDUFS3
KBTBD4
HNRNPA1L2
EIF4A2
AGA
MED14
NDUFA10
HAUS5
ZNF829
ZNF568
BTD
HNRNPD
TIMM9
KIAA0586
MARCHF2
YIPF2
TIMM29
PSMF1
SAR1B
OPA1
CRKL
NIP7
COG8
HERC6
TBCB
POLR2I
FDX1
RCOR1
MICOS10-NBL1
MICOS10
ZNF43
EIF2B3
MFSD8
ABHD18
H4C12
PDSS1
CAMK1D
LOC102724265
GCFC2
DPH7
GPR3
NUDT5
CDC123
SLC2A4
RASGRP4
MRPL48
MTR
TIMM23
MTMR9
ERMARD
SRRT
SLC7A11
MCUB
NASP
PAFAH2
ZNF408
ARHGAP1
SEC13
GORASP2
ZNF527
RCOR3
HEMK1
SMARCC2
CENPS-CORT
CENPS
CPSF1
DOCK7
NT5DC1
SEC14L1
ZMYM4
DNAJC25-GNG10
DNAJC25
TEFM
TDP2
ACOT13
ZNF292
MRPL16
ZDHHC6
VTI1A
ZNF25
MEAF6
RAB18
NFAT5
GOSR1
ZNF599
ABCF3
ZCCHC3
MRPS34
EME2
ZNF160
FABP7
DDI2
TARS2
TTC4
RPS26
SASS6
FKBP8
CEP295
TXLNA
KPTN
CHD1L
ALKBH3
PRKAB2
TMEM259
ACBD5
UBA5
ACAD11
UBE2D2
MFSD3
IQUB
SCAND1
NBPF1
SOD2
MEX3C
WTAP
HECTD1
TCHP
PDXK
POLR2J3
ZNF3
FUT10
ARHGEF12
GTF3C6
XRN1
ZNF239
FKTN
ZNF606
LHB
CLK4
RINT1
MUC1
NCOR1
GP6
SYCN
BNIP1
SLC35A3
WDR31
PES1
STAT1
POLR2C
ZNF621
TBC1D2
TJP3
YME1L1
MASTL
C19orf25
ZNF808
GFUS
PDE11A
NOTCH2
SMPD2
PPIL6
SSNA1
ANAPC2
MANBA
FUT1
MAPKBP1
UIMC1
CDK11B
CDK11A
LXN
C3orf86
TMPPE
GLB1
SLC39A13
CTR9
USP53
NFYC
ZNF805
RPL24
ANKRD18B
TLR5
ABCD4
WAC
ATP6V1H
SESN1
CEP57L1
SH2B1
THOC5
CDKN2AIPNL
CDKN2AIP
MMAA
SCRIB
SLC35B2
TARBP2
ANKRD13D
APOBEC3F
RPL26L1
TOMM40
TENT2
FBXO46
TRUB2
COQ4
PRMT5
NSUN4
BRAP
ACAD10
GAR1
HPF1
CREB1
SIGLEC6
NME1
RNF6
FAM13A
CYB561A3
TMEM138
BLOC1S6
EML3
ICE2
ROM1
RPAP1
TMEM154
ZNF787
EIF6
BAAT
TPR
ODR4
MED4
PTCD1
CPSF4
CLASP1
C4orf3
PPID
SAMD1
APOBEC3C
AKAP10
CDK12
RRP15
ZNF212
LIG4
ABHD13
PDSS2
IMPA1
MON1B
ZNF100
KHDC1
GHRL
GSPT1
RSAD1
FAF1
AMACR
SNAPC5
RNF19A
MND1
ARHGAP18
ZFP69
CEACAM21
CNTNAP4
RGS20
MED18
PHIP
FAM98B
LARS2
CYREN
ZNHIT6
JRK
CLK3
ZNF566
CFAP36
GALK1
TMEM192
STK3
TBCC
BICRAL
RBL1
MRPS15
RPS4X
MRPS2
C9orf116
ZBTB4
POLR2A
RPS8
OSTM1
PTOV1
ZNF544
CEP72
MEGF8
PCTP
DIS3L2
PRELID2
MAPK1IP1L
VRK2
MRPL58
NDUFC1
NAA15
ELOVL1
MAST4
KLHL18
KIF9
BTG3
RPS16
LTN1
SPHK2
RPL18
PPA2
TOB2
DMTF1
ABCC10
TMEM17
MAGOH
ADAR
ZNF197
SLTM
METTL9
SNRPD1
RIF1
COMMD1
KIF15
KIAA1143
DDX5
CEP95
CCT4
CCDC69
PSD4
KMT2B
CD320
BACH1
SLC9B2
ITGA2B
CAT
ASNS
RHOT2
C18orf25
SYT7
TOE1
MUTYH
PPIL4
PSMD14
SPAG4
SIKE1
ZNF554
RNF220
PCBD2
ANKRD13C
AUNIP
RUFY2
WDR62
THAP8
HNRNPA3
PLAGL1
PITHD1
ZNF627
THAP3
ANKLE1
INKA2
DDX20
NDUFA11
MTHFR
VMAC
LRRC47
SNX14
MYBL1
CLCN6
DEPDC1
ATE1
FUT4
LRP6
U2SURP
CYB561D1
CCDC107
SFSWAP
STK40
ZNF891
ZNF10
RIPOR2
SH3GLB1
CLCN3
FBXO8
CEP44
POMK
DEPDC1B
ZDHHC17
SMIM13
PARK7
UBE2D3
VCP
ZSWIM9
LIG1
ACADM
C19orf48
PHF5A
ACO2
AMMECR1L
RPS5
ZNF76
AGGF1
MRPS16
NUDT9
HEATR5A
ZNF181
PRC1
TAF6
CNPY4
GALNT7
WDR43
ZSCAN30
ULK3
HMGCL
PPP6R2
ZNF341
SECISBP2L
ZZEF1
CYB5D2
NCKAP1L
DTWD2
UCP2
HTRA2
RNF34
SNX25
CFAP97
TMEM43
CHCHD4
HINT3
ZNF605
RRP1B
HSF2BP
TMEM267
ZNF611
SPATA33
ZDHHC5
AQP3
IGF2R
CEBPD
OTUD7B
ZFYVE9
ECT2
DDX60L
ALG14
PNKP
ZYG11A
PIGBOS1
PIGB
SLC35A4
APBB3
BCL2L13
ATP5MF-PTCD1
ATP5MF
SUGCT
MPLKIP
SEC23B
CCDC174
SLC25A16
DEDD
LENG8
WDR87
SIPA1L3
SNCA
EXO5
DDX41
AMPD3
SLC35E1
VPS26C
ZNF668
ZNF646
SMAP1
FBXO42
ZNF331
GINS3
JADE1
DDX59
ZNF234
RMDN2
SMAD5
PDCL3
SF3B1
ACBD6
TBC1D13
TCTEX1D4
BTBD19
GPATCH3
ATIC
TRIM41
TM2D1
WDR83OS
WDR83
DNAJC1
SMG9
ARFGEF1
EMC4
CTSO
BRAF
PABPC4L
SERP1
EIF2A
SLC25A32
DCAF13
FAM98A
TARDBP
PPP1R11
SAMD4B
RAB37
YWHAQ
PPIG
MAPRE2
GDPGP1
CIB1
NDUFB3
FAM126B
NPAS4
RABGAP1L
NOS3
ACOX3
ZFP30
TMEM70
TRMT44
RPL37
ATP1A1
POLR3B
PPIP5K2
YTHDC2
RERE
SLC25A51
RBBP9
SFT2D3
EIF3F
VTA1
NMBR
EPS8
ATF7IP2
BCAR3
LSG1
GOLM2
HTR5A
STAT3
ITGA4
INO80C
C3orf14
RNF187
RILP
SNAP47
ATR
KDM3A
ORC4
MBD5
SNX17
EIF2B4
JMJD4
TATDN3
NSL1
ILF2
FGFBP3
ATP5MC2
KANSL3
SLC29A2
ZNF540
TTC26
ZNF571
KLHL20
ZNF226
IST1
SCNM1
LYSMD1
POLR3E
PDE4DIP
MMP7
KIAA1549
GFM2
CPPED1
TUT1
GABPB2
WDR55
COPS4
DDX18
CTNNB1
MRPS23
ZCCHC4
SNRPB
OTUD7A
ATF7IP
RAB30
CBWD5
ZSCAN25