ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7030917 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◣ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KCNJ15
FAM227B
DTWD1
PSMD6
CCDC200
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
KMT2A
EIF2D
MTRNR2L2
STX16
SMARCD2
KDSR
PFDN4
ZNF217
SRRM3
WDR74
DCLRE1B
AP4B1
N4BP3
POLR2J3
SNX16
BCAS4
B4GALT7
IQSEC3
ZNF76
ATP1A1
DGKZ
NCOA3
WWOX
HTR5A
SLC39A13
TTLL12
ARHGEF1
NFAT5
MTRNR2L8
CALM1
TBX2
AP4E1
RBBP5
ACSF3
ATXN7L1
FZD1
PREX1
NSFL1C
GBA
MRPS23
MKRN2
ZCCHC4
SEC13
CTNNB1
FRA10AC1
GNAL
RAB37
CHD1L
PRKAB2
OPA1
BRWD1
DPY19L4
PDE4DIP
ZNF341
C3orf14
USP32
APPBP2
SMG8
GTF3C3
DRAP1
C11orf68
LSS
NOXA1
TRIM3
KAT6A
DHRS13
ARFGEF2
DSTYK
PUS7
PRELID3A
OAZ3
KANSL3
UPK3BL1
SSBP2
TRIB1
C18orf25
SDK1
ZNF609
HMGB1
USPL1
PRRC2B
SLC44A1
POLR2J
TPM1
ALG10B
MRPL1
TARS2
SLC24A1
PEX3
ADAT2
SLC33A1
CRBN
UCHL5
RO60
TRIP4
RNFT1
ARPP19
WWP1
CUX1
HEATR6
CCDC130
PPP5D1
CALM3
SF3A3
WDR11
RINT1
PPM1D
MAD1L1
ANGEL1
C7orf26
USP30
BPTF
ATR
NFYB
RBBP8NL
TEX14
RAD51C
OTUD7B
BRD3OS
MAIP1
VPS37D
DRG2
MIS18BP1
LYSMD2
TMOD2
EIF3F
GTF2H4
PPP6R1
METTL9
USP8
MRPS31
GNB2
CLUL1
ZNF398
FAM102B
DDX59
ITPK1
NEMF
SLC37A4
ZNF212
HECTD1
MYL12B
EPS15
LUC7L2
FMC1-LUC7L2
TBC1D19
MRPL40
HIRA
RBM48
PEX1
KMT2C
C1orf53
ATAD2
NDUFAB1
ARHGEF12
MYO5B
ZMYND8
ATP8B1
FAM207A
FUT1
DCP1A
CADPS
ASNS
FAM3C
SNX27
HSPE1-MOB4
HSPE1
HSPD1
LSMEM1
ADPGK
FOXK1
ARHGAP39
RPS20
NCBP3
PRKAG2
INO80C
ZNF425
THEM4
PARD6B
SNRPB2
CIZ1
NOL11
USP3
DNM1
MTRNR2L9
RBM28
RFX7
RBSN
PDAP1
BUD31
CRYBG1
DVL3
RILP
RRP8
ILK
NOP16
HIGD2A
TRIM37
ASB6
EXOC2
ANKRD36C
HOOK2
AMER3
NME1
CNOT6
KCNH6
GNAI2
PPP1CC
SLC27A2
RBL1
ATP5MPL
ZC3H6
AP1G1
MTERF1
POR
TEX2
SSBP1
GFI1B
TSC1
RCOR3
NUDT4
NUDT4B
AHCYL2
IL17D
FRG1
LRRC37A3
USP15
VPS28
SLC22A23
PIAS2
KATNAL2
NMB
RPS7
POLR3B
REXO4
EIF1B
MAPKAPK5
OSBPL1A
CIB3
CMTR2
KIAA1549
MAP3K2
ZNF860
OSBPL10
SCAMP5
MZT2A
EPG5
BCAS3
COX16
FAM133B
TMEM65
NUP107
CELF6
GTF2H2
METTL25
CCDC59
UTP3
IMPACT
RAPGEF1
SBK1
PTPRN2
AGK
KRR1
RRP15
VARS1
GTF2IRD2
PPM1A
MCM7
AP4M1
PXYLP1
COLEC11
TDP2
ACOT13
ANKRD40
MDM4
ENOSF1
MYO5C
GRINA
HIPK1
STEAP1
ITGB3BP
EFCAB7
AURKAIP1
DNAJC11
CPLX2
XXYLT1
COPS4
ZKSCAN2
ADAM22
LTBP2
ZNF165
KCTD18
ATXN2
SYBU
NUF2
BMS1
TBC1D13
NPAS4
MAN2C1
ZNF282
NAPEPLD
STX6
MEMO1
DNLZ
WASHC5
NSMCE2
EML3
ROM1
PRDX2
UPK3BL2
MED23
TECPR1
ACTR10
ZNF391
FAM228B
SF3B6
SKIL
SPPL2A
EIF3E
UIMC1
CPSF1
PAK2
SMPD4
MZT2B
RMND5B
LRATD2
BCAS1
UBQLN4
LAMTOR2
KIAA0232
ZFAND4
TMEM121B
SCAND1
SCNM1
LYSMD1
BNIP1
CYB561D1
GABPB1
CDC25B
ZNF746
CENPB
PHLPP1
STX18
TACO1
WDR43
TPR
ODR4
AP3B2
RGS6
NUDCD1
RGS9
MOCS1
CDK18
KDM3B
ATAD2B
ISM1
SRRT
DLD
LRP12
ANKS6
VWA8
C12orf73
CEBPA
DBNDD1
GAS8
SMARCC2
ETFDH
C4orf46
PALB2
DCTN5
SLC44A2
TMEM134
ANKRD46
PRKCE
ATMIN
C17orf49
GSAP
RASA4B
SNRPE
KLHL22
TMEM41A
DDX1
ZNF3
EDC4
RANBP2
SYT7
ACVR1
TSEN54
CASKIN2
RASEF
NCAPH2
LMF2
C1orf21
UNC5A
PRPF18
LPIN2
CLCC1
RNF166
CTU2
SNX17
EIF2B4
C18orf21
VPS72
PDS5A
TUBD1
RPS6KB1
BRINP3
MTF2
INTS12
GSTCD
INKA2
DDX20
SYPL1
SRI
FAM83A
NMT2
LRFN2
FECH
ZMYM2
GRHL2
MRPL44
SETD1A
DDX41
CDYL
SLC25A15
GIGYF1
ADRM1
HUS1
CASC3
RSF1
AAMDC
ZFP62
KLHL25
RHOT2
PDE8A
ACTR3
EP400
AMOTL1
RNPS1
EPS8
TRUB2
COQ4
TMEM68
TGS1
FOXP4
CUEDC2
GPATCH1
POFUT1
PLAGL2
TBC1D9B
PRKAR2B
LAMTOR1
INTS4
RP9
MYO5A
KCTD3
BCL2
FA2H
ETNK2
CCDC174
C4orf3
NOL7
NR1H3
ACP2
GORASP2
GCFC2
ELOVL2
PCBD2
EED
TPBGL
SSH1
GREB1L
RBM45
MFAP3L
ELF2
DIAPH1
TGIF2
TGIF2-RAB5IF
HDGF
TC2N
WDR24
NOC3L
KIF21A
OGFOD3
HEXD
RABL2A
SLC48A1
TRIM56
SYNM
LACC1
CCDC122
WDR36
CCDC97
CLTB
SELENOT
NUCKS1
ZNF276
IVNS1ABP
TESMIN
VPS9D1
DDR1
PAXBP1
RPS29
PSMD3
WIZ
UBE2Q1
TEX261
CAPRIN2
RAB12
NEUROD4
PTPN18
NPEPL1
CLK4
TSN
RUFY2
WASL
GUSB
RNF115
POLR3C
ATXN7
ARHGEF28
GNAS
MSI2
AARS2
CGRRF1
STXBP5L
GTF2F2
SUSD6
KLF2
DNAJC25-GNG10
DNAJC25
EIF1AD
BANF1
DHX16
ZNF579
BCAP29
MET
USP46
CLDN3
ATG101
SFSWAP
TIMM9
KIAA0586
ZNF687
EBAG9
BRIP1
DGKH
CTNND2
NIFK
ZFP30
POLR3E
HNRNPD
CDC73
GEMIN7
GTPBP10
CSDE1
SIKE1
ZNF148
SNAP29
PI4KA
NDUFA11
VMAC
TSKU
TTC6
FOXA1
RPL37
ZNF408
ARHGAP1
ZNF280D
TRAM2
BHLHE40
JRK
RRP1B
HSF2BP
KLHL12
WASHC2A
TPGS2
TRIM33
TFRC
RNF169
ATXN7L3
GSC
PPIP5K2
U2SURP
XKR7
CELF1
SLC26A4
THAP12
GVQW3
NRAS
NOM1
TRABD
TRIP13
BRD9
RNF215
BTG2
BCL3
INTS5
CLTC
DCTPP1
NPL
ZNF641
OTULIN
PRICKLE1
RCE1
FANCC
ADRA2B
CYP24A1
BMP7
TOP3B
ATXN7L2
TMA16
CYREN
PTCD1
CPSF4
PCYT1A
CBLL1
CLK3
PLEKHG4
TLK2
ITGB4
PSMF1
MTR
METAP1
GOLGA3
ZNF354A
PPFIA4
ADCK1
CARM1
DNPH1
SMAD2
HARBI1
ATG13
PRELID3B
MRPS18C
HELQ
CPPED1
NDFIP1
WDR70
USP42
ADIPOR1
KANK2
REPIN1
MRPS21
UBTD2
SEMA3C
ARHGEF11
THOC7
TPK1
MRPL3
SNX18
IQCH
AAGAB
PHAX
ELK4
CTNNA1
RPS10-NUDT3
RPS10
UBR3
PDE9A
MNX1
TMEM70
MAPK1IP1L
FITM2
TUT7
CCDC71L
SELENOM
DPY19L1
TDP1
EFCAB11
HMGN1
ALDH3B2
HBEGF
ZMPSTE24
ERCC6L2
QSOX1
CEP135
SPIDR
MPHOSPH6
GTF2IRD2B
TTC23
LRRC28
SAMD4B
BOLA3
AP5B1
ADARB1
PURB
LOC100287896
LIPT2
C11orf24
PRMT6
YPEL3
GRPEL2
GK5
ZNF790
OXR1
SCRIB
NXPH3
IMMP2L
KPNA1
ATE1
RAP1B
DBN1
SQLE
VRK1
SUMO3
TVP23B
STXBP3
TADA1
ZNF718
PPP1R9A
LEO1
ERBIN
MPP5
PTBP3
PGBD1
ZNF592
ZNF595
GAB1
CBX1
SFT2D3
NOTCH2
SMIM13
RNF6
UBE3B
KCTD10
C7orf25
ARL6IP1
DYNC2I1
ATL2
ATXN1L
PFKFB3
ADPRHL1
MAPT
UBE3C
SRPK2
YOD1
PFKFB2
RBM38
TPPP
MMP25
GLIPR1L2
LIG4
ABHD13
ATPAF1
PAIP1
TMEM14A
ZNF70
ZNF485
CERS2
UNC5B
MAPK8IP1
PLEKHM3
TRNAU1AP
GEMIN5
CIPC
KDM2A
DNAJC2
PRICKLE4
FRS3
MRPS5
SAV1
TMEM63B
MRPL14
MRC2
COPS7B
GTF3C5
MRPL39
SPHK2
RPL18
DYRK4
EEF2K
LIMS1
NCKAP1
SPIRE2
ATG14
SLC6A6
UTP4
DERPC
CHTF8
SLC29A2
HEXIM2
NOTCH1
ZNF318
RPS6KB2
DENND4A
SUMF1
ZNF821
CAPZA2
FHDC1
LMX1B
SLC25A51
POLR1F
YIPF2
TIMM29
PPP2R3A
KLF3
ZXDC
RNF114
WDR72
ADRA2C
FGFBP3
RPS3A
LEMD2
ELAPOR2
NACC1
ALDH5A1
CCDC92B
SPACA6
SYK
XPO4
MAPK4
PPP6C
NDUFC2-KCTD14
NDUFC2
TATDN1
NDUFB9
WDR41
SRCAP
LOC730183
RNF19A
UBE2Z
MAZ
SAMD1
RPS14
AMBRA1
TMEM199
POLDIP2
CXXC1
PEX11B
PODXL
SND1
DYNLL2
ZYX
HRH3
LTBR
TELO2
UFSP1
FAM131B
DCAF10
SMG7
AAAS
PPIL1
THOC1
SLC25A40
DBF4
MARCHF6
SOCS3
SQSTM1
CORO1C
MGAT4B
CUL1
TRPM7
MRPL38
KANSL1
RXRA
PABPC1
RCOR1
RNF138
ARAP2
KLF4
SOX13
GFM2
NDUFS3
KBTBD4
TRMT2A
RANBP1
COG2
RGPD5
RGPD6
BARHL1
RGPD8
GET4
PMPCB
FAM171A2
SIPA1L1
ZDHHC17
DENND1A
STEAP4
FAM214A
CTDSP2
KCTD5
TMBIM4
TRIM59
MTLN
ATP5MF-PTCD1
ATP5MF
PPP3CB
RIPK2
PLEKHA8
AFG3L2
ZNF696
GRAMD1A
POLE4
CENPV
EIF5A2
LMAN2
SLC39A11
CCPG1
C15orf65
FAM8A1
MLLT10
REEP5
C18orf32
PBX2
IGSF9
ZNRF1
CD276
ANKRD36
TBC1D22A
CYP51A1
PROSER1
NHLRC3
BCAS2
MEST
ZNF277
DOCK4
CHRNB2
TMEM150A
TTC39C
PPM1E
ZMYM5
MORF4L1
CFAP410
P2RX4
KRBA1
TOMM20L
PKM
SLC25A13
XKR9
LACTB2
ZNF319
USB1
MED20
BYSL
LMBR1
LLGL2
EML1
PLEKHA7
RAD52
ZNF879
SUPT4H1
SPOPL
ZBTB38
PTPRE
PTPMT1
PTGFRN
GABPB2
WDR55
CEP120
DTWD2
RAB6A
SPDYE14
SPDYE10P
CASTOR2
RNF139
GNPNAT1
MTHFS
CSK
ZNF572
ANKRD28
SP1
CCDC149
ACTB
ONECUT1
IRX2
C5orf38
FUT8
AKAP1
MC5R
TWSG1
MARVELD2
RAP2C
SENP1
PFKM
SLC39A3
YBEY
MCM3AP
MAPKBP1
CHMP7
PACS2
BRF1
ICE1
TRRAP
MALT1
PRKAR1A
LYRM9
TSNARE1
ATP13A3
NHP2
PAWR
BAIAP2L1