ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: DRX402530 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◣ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

LDHD
TATDN2
BCR
MAMDC2
PPIG
KRBA1
MBOAT4
SARS2
MRPS12
ZNF572
UBE2F
TMEM89
AADACL4
COL18A1
TXNRD2
GORASP2
KCNJ15
ZNF562
SUMO3
LZTR1
SLC1A7
LOC102724265
MROH7
YTHDC2
IL36A
CEP85
C1orf167
ZNF32
GRAMD4
CCDC200
IRAK2
ZNF623
FRG2C
THEM4
PRRT1B
ENG
YY1AP1
DAP3
ZNF761
FAM209A
DEGS2
FAM184A
IGFALS
ADCY10
CTAG1B
CTAG1A
DBNDD2
GSTM5
MAP1LC3B2
SEC14L1
ZNF439
ACYP2
MTRNR2L1
AUH
ST20-MTHFS
IL21R
CORT
HP
LUC7L2
FMC1-LUC7L2
FMC1
TM9SF4
GPRC5C
C2orf88
HSD17B6
FAAH
LEP
RBM33
MON2
EXTL2
CCDC130
PRSS38
ZNF341
CEP192
APOBEC3B
PRIM2
SNCG
MMRN2
LONRF2
ARHGAP39
CYP17A1
PDCD7
SLC27A5
TRANK1
MRPL34
UBAP2L
C1orf43
MID1
ZNF324B
RNGTT
ZNF577
MATK
SPDEF
NOS3
ST6GALNAC6
MTRNR2L2
MSH3
DHFR
LARP1
MUC3A
RNF215
YPEL3
TBX6
RBPJ
PDE2A
RFC1
MTREX
DHX29
FEM1C
CCNT1
NUP210L
DUX4
ZNF317
SYT3
CACNG1
METTL6
EAF1
SPSB1
SNIP1
DNALI1
C4B_2
C4B
LOC110384692
C4A
POLR3GL
ANKRD34A
OR4K17
FRG2
IGSF3
GLO1
DDX31
GTF3C4
TTLL11
SAP130
NME4
IFT88
OPN1SW
POLR2E
GPX4
TNXB
PCP4L1
TTC38
PKDREJ
ADI1
GALNT2
ANKFY1
CCR6
PRELID3B
FAM234A
SPATA45
CD14
TMEM42
LRRC20
ADAR
RIC8B
BANP
KLF3
MTRNR2L8
KDM1A
NUDT3
CATIP
GRM4
AFAP1L1
SAMD1
RARRES1
PLVAP
SEM1
CEP72
METTL8
DCAF17
DEK
STAU1
ZFP69
KDM3A
JAGN1
ACOX3
TRMT44
TMEM62
TMEM44
MACROD1
TOE1
MUTYH
POLE4
POM121L2
WRN
RBM28
MSMO1
YJU2
ZNFX1
SCCPDH
LIMD1
KRTAP10-9
PPP5D1
CALM3
GTDC1
SLC25A12
SLC35E2A
CSAD
ZNF740
SNX16
GPD1L
RPS7
AIFM2
FAM20B
LCN8
MMEL1
FAM89A
SFTA2
NDUFS4
ESR2
PHACTR2
CFAP157
TMEM229B
HARS2
HARS1
ZFP1
PPM1B
H4C8
ARL17B
ZMYM6
UFSP2
C4orf47
ZNF683
KLF18
UBLCP1
ZNF438
GALNT1
FAM227B
DTWD1
ZSCAN31
LRRC61
ACTR3C
HDLBP
HSD17B4
SSH1
TEDDM1
AGGF1
MTRNR2L9
FAM25E
HTR3E
ARHGAP19
ANKS6
TOP3B
PRKCZ
TMEM14C
APOL4
TRIM25
VPS37D
LRRC59
FBXO17
TLR2
BSDC1
ZNF772
GDPD5
ADTRP
SLC35E2B
GOLGA5
CNOT11
FAM153B
CD47
TIGD2
NDUFA8
MORN5
TNK1
EFCAB10
PRRC1
C19orf18
ACTL8
SLC2A7
HEATR4
UGCG
ZNF211
SAR1A
C1orf159
MTRF1L
TEX101
EPS15L1
FBXL12
MAPK1
AUNIP
NDUFA12
PDE7A
OR2W3
MDK
FLYWCH2
FN3K
SGMS2
PARP15
ZFYVE28
MSL2
LRRC34
EPO
TLCD4
TTBK1
ZNF426
FOXN1
RAB40B
EPHX2
ZNF398
ZNF425
RSRC1
DGKH
PACSIN1
JMJD1C
REEP3
SCGB1C2
SCGB1C1
PDRG1
LMBR1L
HDAC9
CNGA1
FGGY
DHX32
IQSEC1
HERPUD2
LAT
SLCO1A2
KRTAP7-1
RTCA
DNAH8
KMT2A
RNF217
DNAJC14
AGPAT3
RSL24D1
PPDPF
DHRS4
RSAD2
PRAME
NOD2
CAV2
PFKFB3
ANKRD54
EIF3L
F2
FAT1
TP53BP2
DHCR7
HACL1
BTD
DGCR6L
NDUFS7
SAMD4A
ELAVL3
ACAA2
ANP32D
PTGS1
C2
CCDC181
OR2AP1
BBS12
PPARGC1B
ELOVL2
CPA1
ZNF546
CCDC166
TMPRSS9
STRIT1
PSEN1
L2HGDH
DMAC2L
MPP3
CLDN16
TRIM38
ZNF114
CDCP1
BRWD1
DNAJB13
EIF4E
SMYD3
CALCB
DDX19B
USP2
C22orf39
CYP27A1
AIPL1
LGR5
ZNF57
BAIAP3
ELFN1
SCFD1
AIG1
ZBTB38
FABP6
TACC2
CHD7
ALDH3B1
C1orf158
AMZ1
C18orf63
KIR3DL3
LSS
RABGAP1
REXO4
ADAMTS13
EFCAB13
GPAM
PRSS22
LOC388813
TTLL10
LACTB
KLF16
SLC41A3
PAK1IP1
C6orf52
CYP51A1
ERICH4
SCLY
KCP
CEACAM21
KLRC1
TTYH2
GART
ZNF816-ZNF321P
ZNF816
MRPL40
HIRA
TMBIM1
TCP11L1
BAAT
KRTAP12-2
HOXC5
HOXC6
SMIM34A
CRY1
MCC
DHRS13
SELP
FLOT2
ZFAND2B
ING5
RSU1
TEPP
CNGB1
HIF3A
DPY19L4
LOC100129484
DBN1
WDR74
MTF2
SLC17A9
TUBB6
COL23A1
ZBTB40
CUL2
RABGEF1
MSRA
TOMM5
AARS1
RNF126
ZNF669
UGDH
TTC17
ERGIC2
DMAP1
ADA
UBE2L3
PARP1
PSMB4
FANCI
OSBPL8
HPCAL1
FAM83G
CLK4
IL36RN
IL36B
CDIP1
ADD1
RBBP5
JDP2
EGFL7
KRTAP10-8
MAEA
RIPK1
PALM
IAH1
KAT6A
NNT
ZNF691
ZNF583
LCE3A
YPEL1
LCE3B
BLM
TAOK3
ZSWIM7
TTC19
MED23
TMEM70
ELOC
REN
STX16
TMED1
PPM1F
GSC2
SLC7A10
FANCL
SPC24
CT45A10
CT45A7
H3-3A
BCL7A
SAGE1
GATAD1
SH3BP2
RAD21
CCDC9
ANKRD33
CYTH4
SPA17
SIAE
RPL26L1
FBXO8
CEP44
KPNA7
TLNRD1
SLC35G5
TMPRSS12
AGPAT5
GSDMD
TMEM9
GGTA1
THAP4
ATG4B
KRTAP10-10
SYDE1
DCAF10
TCAF2
ASS1
ARSH
TMEM43
CHCHD4
HIP1
GK5
P2RX6
ERAL1
NT5M
ANAPC7
ATF7IP2
CLPB
HIVEP1
ZNF550
LIMS1
BMF
NME7
BLZF1
ZNF706
HPS1
TRIM17
H3-4
MPHOSPH8
ADAP1
CASP10
EMP3
OR10A3
LRP5
GINS1
NUDT9
B3GNT2
CEP164
RBCK1
ERICH2
BACE1
CBX1
TRMO
FAM170B
NARF
CYBC1
PIK3R1
CLTB
CDYL
GNL3L
RAB11FIP1
ZNF83
FOXN2
N4BP3
TEX10
OXA1L
BPIFA2
PIKFYVE
COX7B
CRISP1
TMEM244
DHRS2
CHCHD2
PAK2
PM20D1
ACSM2B
MTX2
ZNRF4
NT5DC1
HTRA2
DQX1
ZNF337
PRPF3
ZNF397
ZNF134
TMEM222
CHORDC1
TRPM2
C1RL
ZNF117
TIPARP
NUP214
CD69
MNDA
RPAP1
SLC2A10
SSBP1
CANT1
EPS15
NLRP6
VAC14
CCDC91
RAB11B
ZNF845
OR8B4
INMT
SEL1L
PIGZ
MFN1
C4orf48
FSIP1
ERAS
ZMPSTE24
ZNF792
ERVW-1
GGA2
SUGCT
MPLKIP
LGALS8
DNAH14
ABAT
USP48
KDM7A
MCM9
CCDC112
CCAR2
C8orf58
ZNF780B
CBR1
SH3GL1
CHAF1A
CCDC120
CRKL
ZC3H10
RPL41
IL4R
FAM136A
RBM27
TMEM41A
MAD1L1
MTOR
CD248
EEF2K
ATP23
CFAP70
MITF
PNPLA7
ATP1A1
SUPT6H
SDF2
HLA-E
FAM172A
COX10
RFX5
RHOXF2B
RHOXF2
CCNI
RNF141
CD84
TPST2
ZBTB6
CAB39L
EPM2A
THAP11
NUTF2
CENPT
PIGW
MYO19
C1QTNF6
CYP3A43
C2orf73
TSACC
CCT3
FBXO21
GNPDA1
BMS1
GASK1A
ADPRS
TEKT2
TMEM205
CCDC159
ASCC2
RAB3D
RLN3
SYNCRIP
SLC25A24
MIS18BP1
ZNF610
CCR7
PGAM5
RSL1D1
AVPR1B
PAK4
LCN1
NDUFC1
NAA15
AOPEP
DPF2
GTF3C5
TFDP2
HSFX4
PAFAH2
RPS14
TTC3
CACYBP
PIGP
SMCO1
SATB1
KLRD1
PKMYT1
RNF38
PLEKHH2
DOCK2
SMARCD2
TRIM48
SPRYD4
KRTAP10-5
PPP1R11
POLR1H
COIL
CFLAR
SLC22A1
BCOR
SPSB3
NUBP2
TLR1
USP30
POU2F1
BCL9L
SLC2A9
BRPF3
PEBP1
MFSD6
COMMD5
KATNB1
ZNF296
GEMIN7
RCOR3
NOA1
CD5
ZFAND1
GTF2A2
LINGO3
FAM104B
LOC105376731
LMLN2
BRI3BP
DHX37
AURKAIP1
SDR42E1
NPAS4
ZBTB45
YBEY
MCM3AP
RGS3
DNAJB12
DUS1L
RANBP17
KNL1
GYPC
MSH2
PCK1
KRTAP10-12
ZNF391
ZKSCAN2
SRI
NDUFA6
CPQ
TCFL5
HPSE
C1QTNF8
LY6H
INTS12
GSTCD
AGK
BIN3
STARD9
KMT2D
KLHL12
NIBAN3
ZNF133
EVL
SRL
NRSN2
RNF168
ZNF695
DRG2
ZNF696
SUN5
BPIFB2
ANPEP
HSFX3
TAS2R19
TMEM242
TPM1
PDCD6IP
LSR
NIPA1
ALKBH3
GAS6
TFF2
GBA
C4orf3
KIF3B
ZNF560
WDR70
DCT
PDE6G
BCAR3
RCHY1
MRPS36
ACOT7
PPP6R3
SEC22B
GCNT1
PDE4C
APOL2
HTR1F
SLC6A8
PNCK
PROCA1
MRPL16
TMC5
PPARG
ZNF473
VRK3
CSNK2A1
PLD4
MYEOV
ITGB3BP
EFCAB7
RANBP1
TRMT2A
YDJC
CCDC116
SEH1L
INO80C
SIRT5
SWAP70
CELF1
ADCK5
PTPMT1
LRG1
DPP9
MICOS10-NBL1
MICOS10
DST
PROC
BEND6
DHX33
SLC25A48
IQCB1
EAF2
ALDH1L2
OR13C8
PEX3
ADAT2
CDK11B
CDK11A
COASY
SLC12A9
NEUROG1
EPHB4
WDR4
MIB1
ERMP1
MRTO4
EMC1
CDK5RAP1
FAM98B
ZFP41
WDR25
WARS1
SCAND1
SLC29A2
METTL26
MCRIP2
HLCS
OXSR1
BEST2
TMEM65
ZNF839
GSTA4
KDM3B
MPP1
FHL3
SMG8
AARS2
CCDC115
PLXDC1
AP5B1
NR2C2AP
TAS2R13
ERICH3
TBX10
TRIM52
IFT140
CRAMP1
ATXN7L2
PSMG2
CEP76
EIF4A2
B4GALT7
MRPS18A
ZNF766
GCGR
N4BP2L2
ATG101
TOR1A
KLHL20
ZNF561
ZNF442
ANKAR
C3
GRPEL2
DUSP6
PDE11A
APOA1
NUF2
PAXBP1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SAMD4B
SF3A3
PUM1
NME1
COX16
TTLL12
RPS29
DCP1A
RAB37
EIF2D
YWHAQ
RPL27
FRA10AC1
PLEC
MRPL44
MAPRE2
GDPGP1
CIB1
SULT1C3
HMGB1
NDUFB3
FAM126B
DSTYK
RABGAP1L
TTC32
CALD1
USPL1
SKP2
LMBRD2
TBC1D19
TRIP4
POLR2J3
ZFP30
GTF2H2
STX18
SELENOH
CFHR4
SLC24A1
RPL37
TOR1AIP2
TOR1AIP1
COMMD2
SLC33A1
DNAJC25-GNG10
DNAJC25
NSFL1C
TARS2
MRPS31
POLR3B
PPIP5K2
RBBP9
LIPA
METTL25
CCDC59
ZNF408
ARHGAP1
ALG10B
TFPT
PRPF31
TATDN3
NSL1
RERE
UTP3
SLC44A1
SLC25A51