ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX065554 | U2OS
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◣ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MAPRE2
ITGB3BP
EFCAB7
CCDC200
AADACL4
MTRNR2L8
BSDC1
MAMDC2
COL4A5
COL4A6
SUPT7L
SLC4A1AP
KCNJ15
C19orf18
IRF6
ZNF408
ARHGAP1
WDR74
GALNT1
GABPB2
RBM33
KDM3A
ATF7IP
PAXBP1
YPEL3
TBX6
KRBA1
RPS26
TMEM79
SMG5
TARS2
CDIPT
LGALS3BP
UBB
RGPD2
RGPD1
DHRS2
MTRNR2L2
MSH3
DHFR
CANT1
THG1L
ARID1A
ZNF540
ZNF571
PRPSAP1
RPH3AL
HDAC8
PIH1D2
NKAPD1
CCNI
NDUFB3
FAM126B
MAP3K14
CALCRL
CCL20
CELF1
AHCYL1
RPL27
LRIG2
PLA2G2A
TCTEX1D4
BTBD19
KAZN
RHOQ
ATP6V1E2
PPP6R1
PDE4DIP
CLPTM1
AURKAIP1
PPIL3
NIF3L1
GTPBP3
ANO8
ARTN
TFPT
PRPF31
CELA2A
ZNF806
POLR3A
RPS24
ZDHHC6
VTI1A
RBBP5
RCAN1
NOL12
SSBP1
ZNF577
INTS5
SLC9A1
SERPIND1
APOA1
SLC39A6
ELP2
KDM5C
MAST2
RABGAP1
UBE3B
KCTD10
ABRACL
TNFRSF1B
EIF2S1
ATP6V1D
RAG2
IFTAP
PDE12
IL17F
NEK2
CDK12
EVPL
ISY1-RAB43
ISY1
MRPS33
GTF2H4
ZNF302
PRSS41
DUSP6
HAX1
LY6K
RAD51AP1
C12orf4
CREM
ZNF383
DNAJC16
CASP9
WDR83OS
WDR83
MAN2B1
GBA
ARHGAP39
TBL1X
TPM3
AKIRIN1
ELFN2
SLFN12
SF3A3
MTF2
BCL10
COX7A2
ARHGEF2
AAAS
NBPF1
B4GALT3
SIRT3
PSMD13
THEM4
SEC22B
MMACHC
ZNF585B
CD2BP2
FAAP20
YWHAQ
AP1G1
IGFL4
SLC33A1
ARID3B
GPC6
BAIAP2
LACTBL1
ZMPSTE24
EIF3F
TTC26
LRP6
COIL
PPRC1
TRIM5
TRIM22
LIMK1
EPRS1
ERICH4
DMAC2
ZW10
SNIP1
DNALI1
ZNF750
SELENOH
STC1
C3AR1
DYNLRB2
STX1A
ILF2
HEMK1
C3orf18
RFFL
PLEKHG1
TMEM242
COX16
SCMH1
CASP10
RMND1
ARMT1
SNRPD1
NID1
KCNH4
HCRT
PARP15
IFI6
TNPO3
DDX42
CCDC47
PRRT1B
NEMF
CD14
GLIPR1L2
CHMP7
ZNF572
RABGAP1L
ZNF226
TPK1
CYB561D1
COPS4
PHC2
PACSIN2
MRPL54
APBA3
ARMCX5-GPRASP2
ARMCX5
NME1
RPA2
TTC39C
AKR1A1
RERE
STAT3
RNF125
LMNA
CEP120
STK40
ZNF790
FAM209A
MRPL1
CNGA1
AIFM1
MICALL1
LSG1
INKA2
DDX20
ITPR3
SCT
CDHR5
DNAJB12
WDR55
USO1
SLCO1A2
C1orf174
ZNF793
TTLL2
FBXW10
PHF5A
ACO2
COL18A1
HEATR1
INTS2
ZNF335
REXO4
ADAMTS13
NCOA7
MXI1
DYNC2I2
UQCRC2
YTHDF2
TIMM10
JMJD1C
CEP162
MTR
CGGBP1
FNTB
C3orf38
PLEKHH2
EIF1AD
BANF1
MTBP
MRPL13
PLAU
KDM6B
PLAAT2
MIS18BP1
SLC25A53
TUFT1
PEAK1
HMG20A
TMEM247
ASAP3
SH2D5
TUT1
ZNF56
SLC35A4
APBB3
NR1I2
RBM25
UFC1
MED11
GAPDH
BEST4
CCDC130
TRUB2
COQ4
PLK3
SHOC2
BBIP1
AGTPBP1
CCNC
CLASP2
CALCB
TBC1D19
ZBTB40
TRMO
TXNRD1
LIG3
SNX27
RNF207
EIF5A
TIMP4
NHLH1
MROH7
PSMB7
ZNF829
ZNF568
RPL11
NOL8
CENPP
MIDEAS
NYX
KRT19
RSPH3
FRRS1
RHOD
NDUFS7
RBMS2
GPX1
CPN2
GPX8
SMG8
CCDC97
ZKSCAN2
SCYL3
RCC2
CRTAM
ZNF331
DUSP14
ZNF461
RFXANK
BORCS8-MEF2B
BORCS8
PRKCSH
CCDC151
ANKRD1
DUX4
GTF3C5
TIMM9
KIAA0586
CDH1
BNIP5
TMEM107
PCNP
ZNF221
SUGP1
MAU2
TNFRSF1A
SIN3B
MNAT1
CSTF2T
BORCS7
PRIMPOL
CASP3
TRMT11
CLN3
APOBR
SMG9
DLX4
RIMBP3C
RIMBP3B
WSCD1
INPP5A
SCARB1
RPL7L1
VGLL1
ZNF623
TRMT1
NACC1
HEBP2
RCAN2
MTMR11
GORASP2
ZFP30
POMGNT1
LURAP1
ZNHIT3
NME7
BLZF1
HAPLN2
USP9X
MTHFD1L
MTRNR2L9
AASDH
PSMB5
ZNF566
TM2D1
XPNPEP3
ST13
SYAP1
FAM184A
FEM1C
ZSCAN22
RPS3A
ZNF300
AMHR2
WDR11
ZSCAN30
SIRT4
SLITRK5
SLC7A11
ZSCAN23
SULT1C2
BNIP1
PSMD3
FAM234A
NUDT9
STAT6
UBQLN1
PGLS
GAL3ST2
RCN1
KDM1A
TEFM
TEX46
SLC39A9
ERH
PXT1
KCTD20
NUDT5
CDC123
TFB1M
JUN
C6orf118
FRA10AC1
PPIP5K2
IRF9
FAM89A
CLCN3
C19orf25
STBD1
ADRA1A
TCIM
MED18
RBL1
TBC1D22A
ADAT1
PLPP5
NAV2
UTP3
SLC41A3
SESN1
CEP57L1
SGMS2
CPD
PHACTR4
TTC31
CCDC142
TIAM2
RASL10B
ZRANB2
NFYC
NIP7
COG8
CHPF2
OCIAD2
ABCF2-H2BE1
ABCF2
TBC1D1
FBXO46
TRPV2
ELSPBP1
BSPH1
SUMO3
UIMC1
CCNG2
NRL
DCAF11
SPEF2
TRAFD1
CD320
ZSCAN4
IAPP
FCRLA
KLHL34
PES1
UFD1
CDC45
OPRL1
LKAAEAR1
PLS1
GPATCH3
CARHSP1
RIN2
EXPH5
HOXB13
SYT16
PRPF18
VPS13B
EFCAB14
CTSB
SFXN3
PDZD7
RPS7
SOD2
WTAP
TRIM25
CCNY
RIPPLY3
ARMC1
EIF2AK3
TTLL12
TTC32
MSRA
CLASP1
RPS27A
CLHC1
CSNK1E
NTN1
PIP5KL1
EIF3E
SPSB1
CLTC
PREPL
CAMKMT
CELF3
TTC9B
SLC1A3
CLDN7
KLK10
ISLR
RIIAD1
MRPS18C
HELQ
MRPS23
RGL2
DCTPP1
NHSL1
UBE2F
BANP
METTL25
CCDC59
LZTR1
TOMM40
GTF3C3
ZNF165
TRAPPC8
KIAA0319
MYO1B
LOC100509620
GABPA
ATP5PF
C19orf48
EFHD1
LRRFIP1
SMIM12
KCTD9
CDCA2
CMSS1
ORC2
AKR1D1
PEF1
CBR1
KRTAP10-9
ECPAS
SAT1
TMEM89
DLAT
OSBPL8
KAT7
ZNF2
CACTIN
IFT46
RUFY4
RAI1
SPR
CPPED1
TIGD1
EIF4E2
ARHGEF18
SNX3
ZNF14
ABCD2
TEF
NRDE2
SH3BP4
PSG9
CALD1
MAIP1
RIF1
ALG14
SFSWAP
RETREG2
CNPPD1
ZXDC
NECAP1
ALDOA
PLK2
NOP16
HIGD2A
CCDC115
PDZRN3
ROCK1
GNA12
HSCB
CHEK2
IPO4
CCDC107
TXN2
C1orf158
ZNF24
FERMT3
AQP12B
POLR2J3
RPS14
TPGS1
ZBTB8OS
RBBP4
ZBTB25
ZBTB1
TBCB
ADGRL1
POLR2I
OVOL3
EHD2
SF3A1
CCDC157
NEURL4
SPATA1
GNG5
CYP27B1
METTL1
EEF1AKMT3
TRIP10
PDXP
CLCN4
PUS10
PEX13
CNN2
TMEM259
CERK
SRSF1
PLEKHG2
POLD4
UTP18
MBTD1
INO80C
WBP1
INO80B
CCDC174
KRTAP10-6
KIF20A
BRD8
LTBR
SCNN1A
CLK4
SUGCT
MPLKIP
MAD2L1BP
TTC14
CNIH4
STK32C
GTPBP2
LYPLA2
TBC1D2
ZNF260
LRRC27
SULF1
PIK3CB
MRPS14
IPO13
RHOT1
PEMT
RPS18
VPS52
NCF4
MAN1C1
CHRNA9
NKX3-2
CEP85L
ATG4C
HBS1L
ANKRD17
USP22
TXNDC17
KIAA0753
FAM222B
GALM
RIPK4
PEX3
ADAT2
TMEM222
MRPL48
DHX16
TMBIM1
SASS6
CZIB
CORO2A
PNISR
ARMC7
STX12
KLF6
ZFR2
STX18
TUBB
MDC1
TMEM128
MEIG1
GTF3C6
CDK5RAP2
ZNF708
DCLRE1C
AKR1B15
LIMCH1
YJU2
THOC5
MOB4
POLG
IGF2R
SLC25A44
TM9SF4
DDX41
TAOK3
OSGEPL1
HAUS6
FDXACB1
C11orf1
CEP126
ANGPTL5
ZFC3H1
THAP2
CTH
ADIPOR1
S100A11
CES3
KMT5C
ARHGAP18
EPB41L3
PRSS23
RFTN2
SLC6A18
TMEM69
GPBP1L1
ABR
SPRR2F
FBXO7
HACD2
CFAP43
G2E3
MBNL2
GABARAPL1
WASF1
CDC40
FUCA1
IRF2BP2
MEGF8
MRPL11
CALM2
COPS7A
CDK14
TNFRSF19
FOXO3B
UBXN7
NAA38
NSUN3
DHFR2
GLCE
C16orf92
TMEM88
CYB5D1
CENPA
LRP10
IFI44L
CTSK
GHDC
PDE11A
POLR3E
RBM45
ZNF585A
DHX32
DNAJB4
AARSD1
MED16
PTPA
CRAT
CSF3R
FURIN
RTL9
RUVBL1
NDUFS3
KBTBD4
TMEM101
CD248
RPL26
TMOD1
TIMM50
ARID5A
S100A13
SH2D3C
DNAL1
RHCG
HTR3A
S100A1
SLC27A1
GTSF1L
NHS
MBOAT4
DNAJC25-GNG10
DNAJC25
PMF1-BGLAP
PMF1
TES
TAF12
PPOX
MTUS1
LIMA1
RPF1
BRCA1
WASF2
GABARAPL2
DONSON
AP2M1
RAB40C
SNRPD3
GUCD1
PIKFYVE
CRTAP
ZBED9
PRDM1
ATP2C1
ACSL1
SMARCAD1
ZBTB7B
TRIM10
CDC42EP1
PPIG
LCN8
PRKAG2
SLC35E2B
ASF1A
HEXIM1
THOC2
TMEM205
CCDC159
TENT2
MYEOV
DLGAP4
RAB3D
SBNO1
CSTF3
PPARGC1A
TMEM53
ARMH1
TUSC3
KLRC3
DMAP1
ZBTB45
TIAM1
CACNG1
SRSF4
GCNT2
COA3
CNTD1
SLFN5
UTS2R
BRD4
PLA2G6
APOBEC3G
KANSL3
FER1L5
ZSCAN25
DDX46
UBL7
POLR3F
DZANK1
SMAD3
CENPW
CMBL
SEMA4A
PDE10A
DSC2
SHB
FYB2
GOSR1
ZBTB20
PLCD3
ACBD4
AP3B1
TPD52L1
FOXP4
HROB
SUPT4H1
CARS1
SIAH1
ZNF573
DDI2
HSPA5
ZNF506
ZNF215
F2RL1
KLRC2
CASQ2
OR2D3
ACOX3
TRMT44
ARHGAP19
UBOX5
FASTKD5
SRCAP
LOC730183
DYNC1I2
TNFAIP3
MRPL27
EME1
PRKCZ
SH3BP5
DOCK3
SYNJ2BP-COX16
SYNJ2BP
CHKA
DDX3X
ABI3BP
PAFAH2
MTIF2
BRWD1
RAB30
PDCD6IP
HIBCH
APOL2
WDR5B
FAM71E1
EMC10
GLI1
TBC1D9
SPON1
SNAP47
JMJD4
TTI2
LNPEP
DNAJC11
MRPS15
GADD45A
TMEM138
CYB561A3
KDM8
UBE2Z
FAM199X
LRIF1
PTAFR
LMNB2
ACTA1
APOL1
ASXL3
LMNTD1
ASB5
KIF2C
TRMT61B
NEK4
PIGL
NCOR1
CRNKL1
CFAP61
PDE4B
DNPEP
AGPS
LMNB1
KIFBP
NPEPPS
XKR3
MLEC
C2CD5
PTDSS2
ANO9
SLC4A8
FGD4
ATXN7L3B
GALNT6
TAOK2
FAM124B
PHLDB2
CREB3L2
C18orf21
CDYL
ATP5MC3
IREB2
LRRC49
MCCC1
SPAG9
KLHL18
KIF9
REPS1
GBP2
FAM160A2
CNGA4
CD164
HELZ2
LARP6
CLUAP1
LSM5
AVL9