ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: DRX402531 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◣ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

TATDN2
KCNJ15
DKKL1
MROH7
KRBA1
GORASP2
COL18A1
PRIM2
MAMDC2
SUMO3
UBE2F
BCR
TMEM43
CHCHD4
ZNF562
AADACL4
AUH
EXTL2
MBOAT4
PPIG
IL21R
TMEM14C
CEP85
BSDC1
TMEM89
FOXN1
PRRT1B
IL36A
FAM209A
ARHGAP39
C1orf167
TXNRD2
YTHDC2
SLC1A7
POLE4
TANGO2
GSTM5
DBNDD2
ZNF572
RABGAP1
LUC7L2
FMC1-LUC7L2
FMC1
NOS3
GRAMD4
BANP
AIFM2
ENG
HP
AFAP1L1
RBM33
SARS2
MRPS12
TRPM2
KRTAP10-12
LONRF2
YPEL3
TBX6
GPRC5C
TMEM42
ZNF623
HERPUD2
YY1AP1
DAP3
ZNF761
CCDC200
PRAME
APOBEC3B
JMJD1C
REEP3
THEM4
ZNF317
CACNG1
FAM184A
POM121L2
CCDC130
ELAVL3
C1QTNF6
GOLGA5
SUB1
FAAH
KRTAP10-9
KIAA1549
DPH2
ZNF324B
ST20-MTHFS
ELFN1
TOP3B
GRM4
BPGM
CBX1
STX16
LIMD1
SLC2A7
DEGS2
CTAG1B
CTAG1A
TRANK1
LEP
CATIP
TTYH2
RFC1
SSBP1
ADCY10
CEP72
SEM1
C2orf88
PRSS38
MON2
GPD1L
MTRF1L
IGFALS
HDAC9
LARP1
ACTL8
GLO1
POLR2E
GPX4
DMAP1
RANBP1
TRMT2A
SKP2
LMBRD2
MAP1LC3B2
KRTAP10-6
ST6GALNAC6
PARP15
OR10A3
CLTB
HTR4
SLC22A1
CYP17A1
ZNF439
KRTAP10-8
RIPK1
CPA1
BAAT
MSRA
OPN1SW
ACOX3
TRMT44
MRPL40
HIRA
AURKAIP1
ZNF438
TM9SF4
SLC27A5
PRRC1
C1orf158
SPATA45
C1orf159
FCGR1A
KRTAP10-10
KRTAP7-1
SNCG
MMRN2
HTR3E
MAPK1
MATK
SYT3
GPR84
OR4K17
MTRNR2L2
MSH3
DHFR
FEM1C
YWHAQ
TMEM70
ELOC
CLDN16
HSD17B6
SEC22B
EFCAB10
RARRES1
ADA
ZNF841
LZTR1
CNOT11
FRG2C
TAOK3
N4BP2L2
SLC4A1
IFT88
ATP1A1
TMCC3
DYNC2I1
ACYP2
RPS14
ECM1
WRN
NCOA1
C18orf63
LOC388813
HEATR4
NME4
PRELID3B
CYP3A43
TTC17
TMEM191C
LAMC3
LOC102724265
STAU1
ELOVL2
ARL17B
MRPL34
ABHD8
ZNF385A
ZNF583
PCP4L1
OR2W3
ADAR
CD47
PAK1IP1
C6orf52
TLR2
SNIP1
DNALI1
REN
CADM2
GUCA1B
RSL24D1
CCR6
TTC23L
RBBP5
FGGY
KIR3DL3
TIPARP
SULT1C3
KRTAP12-2
CTAGE6
IRAK2
ZFP69
TMEM229B
SKA1
NECAP2
AGPAT3
UBLCP1
MID1
KDM1A
APOA1
PPM1B
HIP1
INMT
TLCD4
USP48
KCNH2
ZNF398
ZNF425
ZMYM6
EPM2A
COL23A1
CALD1
ZNF426
CTAGE9
AUNIP
LCE3A
LCE3B
GAS6
SPPL3
ZNF32
BRWD1
TIAM1
UGDH
MTRNR2L8
SDR42E1
SEPTIN5
GP1BB
TMPRSS12
MMEL1
YPEL1
CCDC149
MTRNR2L1
SCCPDH
CERS5
WDR74
SGMS2
GBA
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
GATAD1
FAT1
RCSD1
SMU1
ZNF76
CRKL
ATF7IP2
RNGTT
RSAD2
CHCHD2
FAM153B
KLF18
ZNF561
OR10H4
NUF2
TTLL12
PSMB2
ZNF57
NUP210L
HTR5A
LRRC34
SFTA2
OPA1
PPP5D1
CALM3
FAM227B
DTWD1
SGCE
PEG10
ZNF772
SPSB1
HACL1
BTD
SLC25A24
DGCR6L
TTC32
PDCD7
GINS1
FABP6
P2RX6
CLK3
FANCL
TMEM242
ZNF577
EIF2D
C2
ARHGAP19
SERPIND1
DUX4
NUDT3
LACTB
CLK4
MSMO1
CEP164
MARCHF2
CCDC88A
IGSF3
DCAF10
TMEM44
FBXL12
ADI1
WARS2
PSEN1
TIFA
GASK1A
MTRNR2L9
GPX1
ZNF546
UBE2L3
CNGA1
PAFAH2
B4GALNT2
SAMD4B
TMEM41A
RBPJ
ZNF550
FRG1
MNDA
VTA1
NMBR
IQCF1
SAMD4A
KLHL20
DGKH
STRIT1
FZD1
ZNF134
ATP23
HAUS5
MED23
TTLL11
TRIM38
ZBTB6
RAB42
PDRG1
TMEM62
DEK
RNF187
PPIL2
FAM207A
MUC3A
WDR43
PDE7A
RCOR3
ZMPSTE24
ANP32D
CDYL
AIG1
TOR1A
FAM83A
ZSCAN31
ZCCHC4
PDE11A
CYP27A1
ANKRD54
EIF3L
GFI1B
TSC1
GTF2H2
NDUFA12
PPIP5K2
ZSCAN25
PPARGC1B
PLVAP
CCNT1
SELP
TMEM74B
DSTYK
BCL7B
BLM
SMARCD2
CD14
KLF3
CENPV
L2HGDH
DMAC2L
SLC30A8
FRG2
FAM234A
NDUFA6
MSH2
ZNFX1
SRI
ZNF683
POLR3GL
ANKRD34A
MTIF2
ANKS6
ANKFY1
HIF3A
GALNT1
CTAGE15
KLRC1
CEP192
ASS1
RHOXF2B
RHOXF2
WDR36
PFKFB3
SCAF11
COQ2
SAR1A
EEF1E1
MSL2
MIS18BP1
ANKRD33
PHACTR2
MAN2A1
BHLHE40
PEX3
ADAT2
KMT2A
SAP130
NPAS4
FAM133B
RMND1
ARMT1
TLNRD1
LRRC59
NT5DC1
SPC24
VANGL1
TIGD2
CUL2
NOA1
CFAP157
ZFP30
KDM3A
DHX32
NSFL1C
SLC6A9
BICD2
PPM1F
OR13C8
PRSS22
TPM1
MPHOSPH6
CCR7
CORT
CMIP
RTL10
GNB1L
DNAJB12
CDK5RAP1
TRAM2
GK5
FAM13B
KCNE5
MRPL44
FAM25E
PDE2A
DOCK2
TRUB2
COQ4
TMC6
TMC8
HDAC11
SNX16
RPL37
MEMO1
INAFM2
TCFL5
AVPR1B
CALCB
ALDH3B1
NDUFS7
ARHGEF1
PPDPF
MFF
GTDC1
NDST1
NME1
PSMF1
SUPT6H
SDF2
GPAM
SLCO1A2
DDHD1
BBS12
ST6GAL1
NUP214
EIF4A2
CFAP69
HOXC5
MST1
HOXC6
ADAMTS7
PAXBP1
ADRM1
PLAAT5
AGK
LAT
KCNG2
APOL4
ZNF408
ARHGAP1
ALDH7A1
ZFAND6
PHAX
TEDDM1
HDLBP
KLHL22
ZFYVE28
IFNAR1
IL18BP
ADD1
SATB1
SCMH1
EPB41
POU2F1
MTF2
TMED1
CSTF2T
SF3A3
DRAP1
C11orf68
ZNF554
ZNF12
SRP9
CTAGE8
CTAGE4
PRPF19
TMEM109
FAM78A
UGCG
SLC17A9
EPS15L1
PDE6G
KANSL2
TMEM222
NOD2
BEST2
ZMYND8
SLC16A5
LGR5
MICAL3
TEX50
SLC44A1
KANSL3
FER1L5
ERVW-1
RPS7
YDJC
CCDC116
MCC
PTCH1
PDZD8
THAP11
NUTF2
CENPT
AMZ1
ZBTB40
CFAP70
SLC25A12
ACP5
TDP2
ACOT13
PIK3R1
SYPL1
C22orf39
PHIP
ASF1A
TMEM275
KIF12
ACSM2B
MTLN
SPDEF
ZNF133
ZNF816-ZNF321P
ZNF816
IFIT2
RAB37
CCDC150
PKMYT1
FAM104B
TMEM65
ANKRD27
SPACA3
SPHK2
RPL18
FAM83E
DDX31
GNL3L
GTF3C4
CCDC181
POLR2J3
ARID2
PRPF3
TRIM17
H3-4
ZNF391
CASP10
TBX10
NARF
SLC41A3
METTL8
DCAF17
SLTM
ZSWIM7
TTC19
ACAA2
PNPLA7
LCN8
SLC9A1
ASNS
HDAC1
RNF217
LCN6
ZNF780B
RTN4
ZC3HC1
RAB11FIP1
CHD1L
PRKAB2
FBXO17
RBL1
ZFP1
ZBTB38
ZNF211
AARS2
UBAP2L
C1orf43
GTF2H2C_2
GTF2H2C
B4GALT7
EPO
PLEKHA5
MGST3
SNAP29
PI4KA
SLC25A25
LCN1
ADNP
SLC35G5
RBSN
CYP4V2
RIC8B
CDCP1
PHF19
TACC2
ZNF441
NXPH3
PRKCZ
RBBP9
RRP15
ZNF789
ARRDC4
INTS5
CCNG2
RPS29
ABL1
PSMG2
CEP76
LSG1
ZNF280D
FAM13A
CA14
CCAR2
C8orf58
CFLAR
MAN1B1
TSPAN32
C11orf21
EIF3F
LPIN1
RAB40B
KMT2D
CCDC69
PITPNC1
DNAJB2
ZNF329
MKRN3
TFPT
PRPF31
RBM28
PTPRF
HIVEP1
REV1
PRCD
CYGB
SNAP47
JMJD4
BTNL10
SCAND1
TPR
ODR4
TMEM101
PPP2R5B
CYP51A1
SLC7A10
TRRAP
DHRS4
CPLANE1
APBA2
NOTCH2
LRRC20
DNAJC25-GNG10
DNAJC25
GTF2H4
DNAJB13
SGK1
MRPL1
DDX18
MOB3A
IZUMO4
PGLYRP4
PPP6R1
SDHAF3
GPR3
TSACC
CCT3
USP30
SNRNP48
FUT1
FGF21
ITGB3BP
EFCAB7
COX7A2
HTRA2
DQX1
FAM86B1
FOXD2
KRTAP10-1
COX16
SLC29A2
MAGEA11
RPS13
ZNF436
TBC1D24
SOD1
TEPP
CNGB1
MARCHF8
LMAN2
STX1A
KIF21A
C3orf86
RGS14
ESR2
PHF21A
NUDT7
TADA1
POLR3E
STMP1
ZNF117
METTL25
CCDC59
ZER1
GFM1
PPP1CC
IDUA
BPIFA2
CPPED1
NDFIP1
ATXN7L2
NDUFS4
RBIS
TRMT1
NACC1
PFN3
FAM3C
AGPAT1
RCHY1
LARS2
ZMYND11
MMAA
DCP1A
FKBP5
HLCS
C5AR1
PRELID2
SMCO1
SLC24A1
DRG2
SLC25A51
CBR1
SYT7
CNIH4
TMEM191B
CD33
JDP2
EXOC2
AKNA
STX18
ZNF341
CCDC97
RPL26L1
PTGS1
TLR5
ABCA10
HIBADH
FAM89A
GTF3C3
FAM160B1
HSD17B4
RCCD1
TTC4
GDAP1
KMT2C
DHDH
ZNF443
TAS2R13
TTC26
SEC13
SOD2
WTAP
BRPF1
AP5B1
PDE4B
BARHL2
COMT
PTK6
RBP7
CRY1
WDR77
ATP5PB
AADAC
DHX8
PDXK
PKNOX1
SELENOH
RPS15
ZBTB7B
EPRS1
ING2
AAR2
C1QA
CELA2B
WWTR1
NMNAT1
LZIC
SEC14L1
WDR70
METAP1
ARID3B
RAB23
HTR1F
LRP6
SLC35E2B
EPS15
ZNF44
MUC12
SRCAP
LOC730183
EEF1AKMT1
TLE2
JAGN1
TRIM25
UBE3B
KCTD10
TENT2
TOR1AIP2
TOR1AIP1
SLC35E2A
FAM98B
DNAJC11
TTC38
PKDREJ
AGGF1
BIRC2
NDUFB7
LAMTOR1
LPIN2
ADTRP
INO80C
GTF3C5
TRIM58
TSKU
TOMM5
HPCA
CEP120
ARRB2
SPOCD1
MAD1L1
ATR
NDUFS3
KBTBD4
SRRM3
UFD1
CDC45
RSRC1
UTP3
FOXJ3
RANBP9
TRIM52
HPSE
TAMALIN
RPSA
INSL6
ADPRHL1
MRPL48
SH2B1
GALNT2
ASF1B
ZNF609
HLA-E
OR2AP1
LRRC61
ACTR3C
FAM172A
NYAP1
ZNF114
DDX42
CCDC47
HYDIN
LEO1
WNT10A
OTUD7A
SEL1L
SLC2A10
TARS2
ZSCAN30
MAGOH
CDKN2AIPNL
TTBK1
SPSB3
NUBP2
WDR11
TEX46
DCLRE1B
AP4B1
ZNF3
S100A5
S100A4
S100A3
SMIM34A
NEUROG1
IL17B
R3HCC1
MRPS15
MKRN2OS
MKRN2
CEP41
CD55
SLC25A16
DRC7
EPHX2
DPY19L4
SLC39A3
STPG3
NELFB
MYO1H
REV3L
BAIAP3
GOLGA4
IL22RA2
SMIM31
MRPL42
RNF141
TMEM239
C20orf141
TRAF3IP1
KMO
IST1
NOXA1
ZNF610
TXN2
FAM187A
EFTUD2
CCDC103