ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3474299 | LNCAP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◣ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MAMDC2
KCNJ15
ADAMDEC1
MTRNR2L8
MTRNR2L2
MSH3
DHFR
KRBA1
WDR74
RAB37
CLDN18
MTRNR2L1
SMCO1
TSC22D3
PAXBP1
GBA
TTLL1
RGPD2
RGPD1
OR4K17
LCE3A
LCE3B
GOLM2
APOA1
DCP1A
RAPH1
UBC
TRIM48
FBXO31
RBBP5
BSDC1
ILF2
MMEL1
ZNF317
TMEM89
ST20-MTHFS
ZNF761
HTR5A
H4C8
TDP2
ACOT13
DUX4
MATK
C19orf18
NDUFS7
DEFA6
LOC102724265
FRG2C
TOP3B
FAM184A
MTRNR2L9
FAM209A
TARS2
SNAP47
JMJD4
HSD17B6
COX16
TBC1D19
CCDC130
SLC44A1
EIF2D
B4GALT7
SUB1
USP30
TRIM9
FRG2
DEGS2
CABIN1
NCOA7
PRSS38
FUT8
RAB11FIP1
CXCR2
COMTD1
TPM1
ITGB3BP
EFCAB7
TNFRSF13B
TEX38
ATPAF1
ZMYM3
FAM227B
DTWD1
RAD54L2
OR4X2
NUF2
CDHR1
TMEM43
CHCHD4
NCBP3
NPAS4
COMMD2
ATP5MC2
ZNF76
TMEM259
TSPAN10
NPLOC4
CCDC88B
SLC33A1
RPS14
CASC3
EPS8
WDR11
RD3L
MRPL38
TATDN3
NSL1
BCL9
S1PR4
SAMD4B
TACO1
S100P
STK39
FAM174B
DMAP1
KNL1
CALM1
BARHL1
JAK1
UBE2F
AURKAIP1
TINAGL1
PIGW
MYO19
IRAK2
BCR
GPD1L
WWOX
WDFY1
SNX19
NGB
LEP
PDE7B
ANAPC1
PPP6R1
IQSEC3
BLK
ATP1A1
MAP3K7CL
CORIN
HMGB1
USPL1
UTP3
IPO4
ZNF670
RGPD8
RGPD5
RGPD6
MTNR1B
TOR1AIP2
TOR1AIP1
ZCCHC4
PDE8A
TTYH1
GNG13
TRIP4
STX18
RRP15
KRTAP9-6
DRG2
OR2AP1
SYT3
KATNBL1
ACYP2
GRM4
DPH6
TMEM229B
MTF2
EPRS1
CNTNAP4
METTL15
KIF18A
BAIAP2L2
ANKRD20A1
COL23A1
RPS29
RILP
FSIP2
CXCL8
RERE
KLHL12
RHEX
MZT2A
ZFP30
STRBP
NOTCH2NLC
PDE4DIP
NOTCH2
NOTCH2NLB
NOTCH2NLA
DSTYK
FETUB
FOXN1
CCDC92B
MRPL21
IGHMBP2
GNAL
DUS1L
COPS4
COG2
PRSS22
NCOA3
RPS6KB2
IAPP
C2orf88
POLE4
TEFM
FAF1
PCYT1A
KRTDAP
IGFALS
FAM98B
ALG10B
FRG1
SCIMP
CDC73
ZER1
NUDT15
TAF1C
ADAD2
THEM4
MKRN2OS
MKRN2
MFAP3L
COL6A1
LHX6
STX16
RHOG
HARS2
HARS1
PLK1
CACNG4
RPS7
POR
NINJ1
FAM72B
CLEC19A
CLTB
RNF217
TTLL12
ALKBH3
ZFP37
SH2D6
ARSD
MED23
UIMC1
POLN
HAUS3
NEUROD4
PCDH1
SF3A3
ELAVL3
FAM160B1
SPTBN4
BLVRB
SDHAF3
MUC3A
SNX16
CYP17A1
SELENOH
STX6
SLC24A1
AGK
DOCK3
CCDC200
DCAF10
RBBP8NL
POLG
CCDC107
ZPBP2
IKZF3
ZMPSTE24
SMIM17
ADPRH
CD55
CAPN2
NPW
SHTN1
NSFL1C
SLC25A51
NAB2
NUP107
INTS5
MRPS14
CRH
RABGAP1
TMEM242
TTC26
MFSD4B
CDK3
CEP72
MTR
MDM4
SLF1
KIAA0825
CSRP1
IFIT1B
CDK5RAP1
NR1H3
ACP2
RHOT2
DGAT1
ISM1
TRIM52
FGD4
HIBADH
ATAD2B
ITGA7
RDH5
BLOC1S1
TLE5
MRPS31
GPAM
TMED1
ZNF527
CFAP73
CALCB
ADNP
PACC1
ATG4C
ABLIM1
RBM25
SNX18
TFAP4
GTF2H4
MRPS18C
HELQ
LTB4R
CIDEB
LTB4R2
VWA1
CCDC115
PRKG1
CERS3
C1orf68
FBXW7
LIMCH1
OR10A3
SSBP1
PARP2
CCDC174
SRFBP1
CREG2
TNFAIP2
ADRM1
DOCK7
MT1X
NUAK2
RAF1
TRANK1
CEBPA
SYT7
AKIRIN1
HECTD2
CBX1
USP2
DPP9
XKR8
FAM214A
TPK1
BUD13
GSTO2
ZNF35
AP3B1
SAAL1
PXYLP1
KLKB1
CTAG1B
CTAG1A
GINS1
RNF187
AARS2
MT1A
PUM1
TYW3
CRYZ
CORO7
SACM1L
CLUAP1
THG1L
C16orf90
FAM25E
ZC3H6
SYK
C12orf43
ZNF829
ZNF568
KCNB1
YPEL3
TATDN2
AADACL4
MBOAT4
ZNF562
EXTL2
DUSP6
FAM153B
DBNDD2
GORASP2
PDE11A
SNCG
MMRN2
SARS2
MRPS12
TBX6
ZNF572
TXNRD2
FEM1C
COL18A1
APOBEC3B
BCAR3
ARHGAP39
ZNF324B
SUMO3
MON2
LUC7L2
FMC1-LUC7L2
FMC1
TLR2
PRRT1B
GSTM5
GPRC5C
SCCPDH
ANP32D
RFC1
FAAH
ST6GALNAC6
RBPJ
ACAA2
BAAT
NME1
SDR42E1
SLC1A7
BANP
CEP85
ADCY10
PEX3
ADAT2
TMEM41A
SEM1
IL21R
KMT2A
INTS12
GSTCD
ZNF117
SLC27A5
YWHAQ
ZNF623
SATB1
RPL27
FRA10AC1
TMEM70
ELOC
PPIG
IL36A
RBM33
JMJD1C
PLEC
MRPL44
IFT88
ZNFX1
MAPRE2
MROH7
GDPGP1
CIB1
SULT1C3
ZNF577
NDUFB3
FAM126B
NOS3
RABGAP1L
TTC32
CALD1
SKP2
LMBRD2
ACOX3
HERPUD2
NARF
POLR2J3
ZNF426
GTF2H2
CLK4
CFHR4
PNPLA7
TRMT44
APOL4
DPY19L4
ENG
PRELID3B
TMEM14C
RPL37
ZSCAN31
SMARCD2
SCGB1C2
SCGB1C1
GALNT1
ADI1
PAFAH2
DNAJC25-GNG10
DNAJC25
PSEN1
ZNF561
POLR3B
PPIP5K2
ZNF792
TMEM62
RBBP9
LIPA
NME4
METTL25
CCDC59
ZNF408
ARHGAP1
TFPT
PRPF31
YTHDC2
CYBC1
KDM3A
CLDN16
PDCD7
DNAJB12
CAT
MAD1L1
GTF3C3
ZNF134
LMLN2
SFT2D3
SLC41A3
REEP3
TIGD2
PIK3R1
ANKRD54
EIF3F
VTA1
NMBR
TMEM68
TGS1
EIF3L
ATF7IP2
YY1AP1
DAP3
GSTA4
SMG8
AUH
THAP11
NUTF2
LSG1
GTF2H2C_2
GTF2H2C
ZNF341
SUPT7L
SLC4A1AP
CATIP
YJU2
CENPT
PARP15
ACTL8
ZNF32
MRPL40
HIRA
BAIAP2
RPL11
STAT3
ITGA4
TMEM44
CAMK1D
REXO4
ADAMTS13
RTTN
SNIP1
DNALI1
INO80C
KDM1A
WDR36
SEC22B
GCNT3
EIF1AD
BANF1
GLO1
FGD3
MSRA
BMS1
DRAP1
C11orf68
ZNF841
C3orf14
PPP1R11
MMACHC
LCN8
NEMF
SCAND1
PRIM2
PSMF1
ESR2
ATR
THOC5
COPS7B
ORC4
MBD5
NBN
SLC2A7
FAM207A
SNX17
EIF2B4
REN
DEK
MTERF4
EFCAB10
SCMH1
CCSER2
SGCE
PEG10
TRUB2
COQ4
ZNF391
ZBTB45
TMEM222
LARP1
FGFBP3
CCDC97
KANSL3
FER1L5
POLR3E
SLC29A2
SUPT6H
SDF2
ZNF540
SAR1B
MOB4
C1orf167
METTL8
DCAF17
FAM133B
MRPL1
ZNF571
LSS
HSPE1-MOB4
HSPE1
HSPD1
WDR43
AKAP10
SAMD4A
RMND1
ARMT1
KLHL20
BNIP1
SPAAR
MRPS23
GALK2
ZNF226
C17orf75
NRBP2
IST1
LGR5
HYAL1
MTIF2
ZBTB40
SCNM1
LYSMD1
GTPBP3
CD47
ANO8
MMP7
KIAA1549
GFM2
CPPED1
ATP9B
NFE2L3
OAZ3
TUT1
GABPB2
COLEC11
DUSP16
CANT1
ZNF609
HACL1
BTD
WDR55
C16orf54
DDX18
CTNNB1
SMIM31
FASTKD1
TEX46
TMEM79
SMG5
CHD1L
GASK1A
SEC13
EXO5
GTF3C5
SNRPB
ANXA2
BRWD1
MRPL48
MAIP1
RUVBL1
C1GALT1C1L
GRPEL2
NDUFS3
KBTBD4
OTUD7A
SERHL2
ATF7IP
TTI2
RPS20
NUP54
RMDN2
RAB30
ZNF566
MLEC
CBWD5
TPR
ODR4
ZSCAN25
C18orf21
STAU1
LZTR1
MAN2C1
OPA1
FBXL12
CFAP298-TCP10L
CFAP298
CASP4
TMEM114
MRPL30
MITD1
RTCA
ARID1A
DCLRE1B
AP4B1
C8orf37
CCNC
PIN4
DGKZ
AFAP1L1
CD14
CBWD3
TMEM101
TTC4
MNAT1
PRPF18
FAM228B
SLC45A4
GOLGA5
KLRD1
SLTM
KLHDC9
CCAR2
C8orf58
ANK3
PCP4L1
TMBIM4
TSGA10
NOP16
HIGD2A
ADPRS
METTL9
SLC39A13
TLNRD1
HNRNPD
CLDN4
EIF3E
RNASET2
SF3B6
CCDC150
COX7A2
GMPS
TMX2
MED19
PSRC1
PDE6D
TEKT2
ZNF398
PSMD6
CDYL
MTBP
MRPL13
CCNI
SUGCT
MPLKIP
BRF2
TSFM
ADAR
SLC38A9
SLC35A3
PSMD3
SRRM3
HUS1
IAH1
CCNT1
INPP5F
POLR1H
ING2
COPS2
MED18
PHIP
TIPARP
REM1
DEFB124
UBLCP1
TRIM38
FABP6
NAA20
CENPV
SMU1
SNRPD1
RANBP1
SLC35E2A
CRKL
PPP5D1
CALM3
ZNF772
TGFBR2
MRPL34
MRPL3
LRRC37A3
GFI1B
SNRPB2
PLEKHM3
PRDX3
KRTAP10-8
TRMT2A
ZNF292
NFAT5
SMG7
SRSF7
SPSB1
NECAP2
TIMM22
KAT6A
LONRF2
N4BP2L2
VIRMA
CCR6
MTOR
CNOT3
TRMT5
SLC38A6
SESN1
LNPEP
ZNF165
CBWD6
ZNF280D
RBM45
RAB18
RPL26L1
TTC13
PRKAB2
ARV1
SEC23B
TTC5
CDK19
AMD1
HAX1
ZSCAN30
SNRPE
ZNF438
TIGD1
EIF4E2
TEX50
PPIAL4F
PPIAL4E
PPIAL4D
WWTR1
PIP4P2
MAGOH
CLTC
R3HCC1
PDCD6IP
LRIG2
CASP10
LRP6
FBXO38
COA6
RNF125
RPS15
MYCBP2
C2orf15
RBM28
ACSM2B
PIH1D2
NKAPD1
STOML2
CADM2
PUS10
PRRC1
PEX13
U2SURP
VPS13B
ZNF554
ALG10
PRKAG2
WBP1
INO80B
NBPF1
TEX9
RFX7
H4C12
LSM5
TIAM1
HIP1
ANKRD40
C10orf88
ZSCAN22
CALCRL
CEP120
DHRS2
AAR2
KMT2D
RPL5
MSL2
LPIN1
CEP57L1
DLAT
MRPL16
SMIM13
TBCK
AIMP1
SUGT1
RCHY1
GSPT1
AVL9
CEP85L
CCDC88A
DDX1
POM121L2
NOXA1
MRPL39
ARRDC2
GABPA
ATP5PF
HLA-E
TARS3
CASS4
CLUL1
NMNAT1
LZIC
RNF6
TMEM42
PPP2R5B
NDFIP1
FAM234A
MAPK1IP1L
KRR1
DHX16
MFF
ZZZ3
PRMT5
MEMO1
GCNT1
ITGAL
ATG101
PFKM
SNRPD3
GUCD1
SRP9
H4C11
MRPS33
PCBP2
SLC35E2B
ZNF425
YTHDF2
CREM
ABHD11
EPB41
HEATR4
ABCC10
ZNF512B
PTPN4
ZNF385A
SEL1L
ZNF546
SEC14L1
FBXO22
RESF1
TRAM1
TMEM65
GNB2
CDIPT
CNN2
HNRNPA1L2
RPS19
GLIPR1L2
SGMS2
PDRG1
DHTKD1
SOD2
SLC35G5
MRPL19
C2CD5
PRPSAP1
MED4
TSC1
MTMR6
MAP1LC3B2
RPS3A
ASF1A
ZNF439
PPP1R3B
SDCCAG8