ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10976388 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◣ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MAMDC2
WDR74
CCDC200
BSDC1
MAPRE2
MTRNR2L2
MSH3
DHFR
MTRNR2L8
KCNJ15
ITGB3BP
EFCAB7
SF3A3
MMACHC
NME1
GALNT1
COX16
MTF2
RPS7
TARS2
RCAN1
CLPTM1
COL23A1
TBL1X
MED18
DHX16
WBP1
INO80B
ALG14
DNAJC16
CASP9
COX7A2
STAT3
INTS5
SMG8
MRPL30
MITD1
TPM3
RPL27
ATF7IP
LGALS3BP
PPP6R1
KDM1A
COPS4
TEX46
SLC9A1
KDM3A
APOA1
EVPL
TUT1
PRSS41
PAXBP1
BAIAP2
ZNF226
LIMK1
AIFM1
LPIN1
BAHCC1
IRF6
ZNF408
ARHGAP1
ARTN
NDUFB3
FAM126B
TMEM79
SMG5
TIMP4
SELENOH
DNAJC25-GNG10
DNAJC25
MRPS23
SLFN12
RABGAP1
SUPT7L
SLC4A1AP
PPIP5K2
AHCYL1
DPP9
RPL38
KRBA1
UTP3
LY6K
ANKRD13C
VTA1
NMBR
DUSP6
STC1
RGPD2
RGPD1
RBBP5
GABPB2
CDIPT
MTBP
MRPL13
PIKFYVE
STK40
ARID1A
BORCS6
EIF2S1
ATP6V1D
SLC33A1
PSMD3
NOL12
TNFRSF1B
KDM5C
RFFL
TCTEX1D4
BTBD19
AURKAIP1
SNX27
C1orf174
DUSP14
SSBP1
FAM124B
TMEM101
C19orf18
PIH1D2
NKAPD1
CCDC174
SLCO1A2
CCL20
ALG10B
EIF3F
KRR1
ZNF688
BANP
CALCRL
ILF2
NID1
DDX41
HDAC8
ZNF585A
MAP3K14
ARHGAP39
SPHK2
RPL18
FAM83E
CDK12
RAG2
IFTAP
RCAN2
DMAP1
EFHD1
GPC6
ZRANB2
TFB1M
CSNK1E
DUX4
WDR83OS
WDR83
MAN2B1
HAPLN2
AADACL4
PCBP2
ZNF806
BNIP1
GYPC
ARMC1
ADRA1A
MICALL1
C8orf37
SERPIND1
GMEB2
GTPBP3
ANO8
RNF125
PRPSAP1
RPS18
VPS52
PSMB7
PSMD9
HPD
MYO1H
RPL37A
C4orf51
ATP5MC2
ASAP3
MED23
RMND1
ARMT1
LRIG2
GBA
COL18A1
AKIRIN1
NPAS4
CCNT1
PLA2G2A
MTRNR2L1
ZMPSTE24
RAB30
TMEM30A
PSMB6
COMMD2
RAD51AP1
C12orf4
ZXDC
PAFAH2
CCDC107
FAF1
DDX18
GOSR1
EMILIN1
ARMC7
SNX17
EIF2B4
INHA
OBSL1
RPTOR
GTF2B
BCL10
DCUN1D2
REXO4
ADAMTS13
TNFRSF1A
HAX1
RPS26
WDPCP
MDH1
GTF2H4
SEC22B
COASY
MLX
DNAJB12
SNRPB
NCOA7
PIGL
NCOR1
TM2D1
POLR1H
ISY1-RAB43
ISY1
TIMM22
INTS4
POLDIP3
PACSIN2
CALCB
MOB4
DHX8
ZBTB25
ZBTB1
NUF2
ZBTB45
INO80C
DCT
PHB2
UFC1
CRADD
FAM222B
TRPV2
SEC16B
ZNF286A
MRPL45
POMGNT1
LURAP1
WDR36
NEMF
TRUB2
COQ4
TOMM40
NEURL4
TTC5
MRPL11
IGFL4
PDE4DIP
ZNF165
ZNF331
ARHGEF2
MVB12A
PRDM1
YJU2
SNIP1
DNALI1
MRPL1
TBC1D9
TBC1D19
CCNI
HEATR1
FBXW7
PPIH
ZDHHC6
VTI1A
EIF3D
CORO2A
TRAFD1
DLX4
DHRS2
ABRACL
LSG1
CCDC115
MRPS15
FDXACB1
C11orf1
ELAC2
MAP2K3
SCNM1
LYSMD1
NOL11
CYB5R4
EFR3B
ZBTB40
GFM2
NUP54
C11orf49
GADD45A
CMSS1
SYAP1
EIF5A
LRRFIP1
CASQ1
TACO1
PPRC1
TIMM10
DBF4B
SIAH1
DAPK3
ZNF510
ZNF56
ARMCX5-GPRASP2
ARMCX5
ECPAS
CASP10
ATG4C
EIF2B3
TXNRD1
PDSS2
PRRT1B
SIRT4
SH2B1
ZBED9
ZNF585B
TMEM247
ZNF540
ZNF571
OAZ3
TTI2
MAGOH
SLC35B1
CDC5L
DNM2
NR1H2
MDM4
MAN1C1
GSTA4
RPL11
POLG
NR1H3
ACP2
TRIM48
RPL22
CCNY
SRRM1
UQCRC2
PRDM4
KRT19
LOC100509620
PEX3
ADAT2
TMEM242
GTF3C3
GALK2
COPS2
LRRC29
RPA2
UBE2Q1
MTRNR2L9
ZNF570
ZNF569
ZNF484
GPR137
HNRNPH3
ACTR6
PBLD
CTSK
PDE10A
TTC26
RPL26
ZNF221
UQCRH
LRRC41
PNPLA7
IPO4
GOSR2
RBM8A
MED16
TTC32
BRF2
LTA4H
RPL29
ADAT1
PHF12
RCC2
ARHGEF10L
RUVBL1
TSFM
SHOC2
BBIP1
TAS1R1
NOL9
UBQLN4
LAMTOR2
SCMH1
SPAAR
DNAJC11
STAT6
ARL14EP
UTP25
LYPLA2
PRKCI
SCARB1
PLEKHG1
IFI6
IL17F
RHOD
TRIM5
AP1G1
CSDE1
TRIM22
ZNF790
TESK1
FAM89A
TRAPPC3
USF1
RAMAC
KANSL3
FER1L5
CDK19
AMD1
FOXO3B
KXD1
DHRS13
ZNF461
ETFBKMT
CPD
GPATCH3
SLC30A5
FRRS1
DSTYK
MRPS18C
HELQ
NUP107
FNTB
COL4A5
COL4A6
TRIM2
HIF1AN
TANC1
MRPL48
EIF3E
PRMT5
SMIM12
SLC30A6
IPO13
ARID2
CDK14
MZT1
BORA
PIP4P1
PYGB
ISLR
PDE11A
RBM45
U2SURP
CUL2
ARID3B
HEBP2
MED11
KDM6B
POGLUT3
S100A11
LHX6
RPL18A
SEPHS2
CACNB4
YWHAQ
TFPT
PRPF31
TMED1
METTL18
C1orf112
HECTD3
SLC39A9
ERH
KAT7
PTAFR
ELFN2
RABGAP1L
PPIL3
NIF3L1
RWDD1
AASDH
MTR
SESN1
PRRG2
NOSIP
RANBP2
ZNF48
RAB42
ZNF184
MYLPF
MYB
SEPTIN1
TMX1
MYCBPAP
GDF6
SULT1C2
LUC7L2
FMC1-LUC7L2
FMC1
ZNF350
TSSC4
RUFY3
NKAP
MYO1B
RACGAP1
SOBP
NECAP2
MSL2
KIF2C
THG1L
CLASP2
PTPRF
SRSF1
MAP3K7
TIPRL
GALM
TES
RPS12
CCDC77
GPN3
FAM216A
PCMT1
GABARAPL1
TEFM
CELF1
ATP6V0D1
AGRP
B4GALT3
SIN3B
AMHR2
TMEM88B
CCNC
NOP16
HIGD2A
RAB5IF
WSCD1
FAM184A
TMEM70
ELOC
SDHAF3
INKA2
DDX20
CCR7
EFCAB14
ATP5MF-PTCD1
ATP5MF
CAND1
SUPV3L1
SYCP2L
GCM2
RITA1
DDX54
DCP1A
CEP120
AJUBA
ACVR1
SF3B5
SEMA3D
INPP5B
CLDN7
CELA2A
CDK5RAP1
MTIF2
ADNP
PARP2
PUS10
PEX13
UFD1
CDC45
ACBD5
TTC39A
RAB33A
GORASP2
CALD1
RTTN
DNAJC24
DCDC1
COIL
EMSY
KAZN
ILF3
OS9
TMEM120B
SMU1
CNN2
TMEM259
ZNF383
SPRR2F
RNF207
STRIP1
ADIPOR1
PKDCC
TNRC6B
TRMO
TMEM128
FBXO46
DEDD
BMF
POC5
NOB1
NDUFS7
TXNDC9
EIF5B
KDM8
SLITRK5
RC3H2
TGDS
KIAA0319
FIG4
AK9
MDH1B
FASTKD2
CREM
PES1
DDX46
TMEM107
UBR2
PCNP
BAG6
APOM
UTP11
THRAP3
TUFT1
ARNT
MBNL1
GTSE1
DRG2
TATDN3
NSL1
COA6
RPS3A
QRICH1
SCP2
PTDSS2
RNF216
PRCC
ANO9
CORO1C
TBC1D23
NSUN3
DHFR2
FLYWCH1
DOCK3
TRIP4
SGMS2
NEK4
HEMK1
C3orf18
MACC1
OSGEPL1
TTC39C
FAM187A
TRIM46
KRTCAP2
EFTUD2
CCDC103
HIRIP3
OSBPL5
OXA1L
PIM1
C1orf100
CHST4
TRMT5
SLC38A6
NFYC
EEF2K
ZNF180
RLF
NUP35
MGRN1
CDCA8
C1orf109
SH2D5
TPD52
TIMM44
TRNAU1AP
SLC2A11
CENPF
TIMM50
ERVH48-1
MBNL2
TTLL2
LOC644090
RPL37
MNAT1
MRPL3
CEP57L1
MRPL19
ATP5MPL
SREK1IP1
CWC27
PPP1R8
RCC1
IRF9
MRPL24
HEXA
SH3BP5
TRMT112
PRDX5
DYNLRB1
RBM33
MEGF8
INTS9
HMBOX1
NOLC1
ZFC3H1
THAP2
SUFU
ACTR1A
ORAI3
TBX18
METTL25
CCDC59
MRPS33
RIF1
OSBPL8
SLC25A32
DCAF13
NEU1
IGF2R
MTHFD1L
PSME3
SIRT2
NFKBIB
RPS27
RAB13
DDX49
COPE
ARSF
ARL14EPL
HMGB1
USPL1
N4BP2L2
UIMC1
TAF13
SMARCD1
STARD10
NFX1
NR1I2
NYX
ADGRF2
ADPRS
TEKT2
LRP6
ATP2C1
PLIN3
HSPA9
MYLIP
DIPK1A
RIOK2
PHF5A
ACO2
ASXL3
MAPK13
CALHM5
PADI3
JMJD1C
SNRPD1
FBXO38
ARL17B
MAD2L1BP
PLXDC1
ZW10
TRAPPC8
CWC25
GTPBP2
HAUS4
ZNF260
RNF43
LIMA1
ARL17A
THOP1
SGTA
FUCA1
PARP15
COPS7B
MAN2C1
PDE6D
ZSCAN30
ALG10
MUC1
GNAL
YARS2
RBM25
IARS2
BPNT1
LIN28A
PHF23
GABARAP
HPS5
GTF2H1
ZNF547
TRAPPC2B
CRIP1
TEDC1
CHKA
ABCB6
COPS3
C17orf78
C18orf21
SUGCT
MPLKIP
RAB18
RBL1
METAP1D
BTRC
DNAJB4
C3AR1
C9orf72
FAAP20
CEP350
FUBP1
EIF2AK3
GGT1
SEMA5B
PPIG
CCDC97
ANXA2
MLEC
AARS2
PLK3
SLC25A53
SRSF11
LRRC40
USP4
NOL8
CENPP
PDE12
YIPF2
TIMM29
C19orf53
ZNF793
CTU1
TEF
SLC37A3
ADGRL2
NUDT15
TTC14
SMAD1
TSPAN3
ZNF345
PAMR1
ZNF829
ZNF568
TRIM38
RPL5
RCHY1
NSUN4
TMBIM1
SOGA3
DDX42
CCDC47
COPS7A
CREBL2
OCIAD2
CLASP1
MAPKAPK5
FGD4
PYROXD2
CSNK2A1
TSR1
SGSM2
RERE
SNRPB2
NRL
DCAF11
S100A13
CDK7
HERC5
NDUFA9
AKAP3
TSSK6
NDUFA13
SNRPG
S100A1
CALCA
ARRDC2
NUP205
TIMM9
KIAA0586
PSMB3
PCGF2
ATAD5
ING4
TNFRSF19
OGA
SUGP1
MAU2
RBM15
FBXL19
C11orf65
BOLA1
HTR3A
THEM4
SMG7
INPP5A
USO1
KLF3
RPLP0
LIG3
CASP8
SRSF4
CD2BP2
ZNHIT3
DCTPP1
AMPD3
GCNT2
NUDT13
ZNF230
ZSCAN4
HK2
RSPH4A
PSG4
CFAP298-TCP10L
CFAP298
LSM5
AVL9
MFF
HMGN4
UBOX5
FASTKD5
UBB
HBS1L
PREPL
CAMKMT
SF3A1
CCDC157
CYB5R2
CLNS1A
NUP42
PSMB5
SMARCD3
C10orf67
FAM228B
SF3B6
STOML2
TMEM167B
SRFBP1
CRY1
CABIN1
DUSP12
TOMM20
ZBTB8OS
RBBP4
MARCHF9
CDK4
PDCD6
NCF4
HMOX1
CLN3
APOBR
RPS6KB2
ZFAND2B
OSCAR
NDUFA3
ZNF175
YPEL2
IFI16
CES3
LOC102723996
ICOSLG
CSF3R
NHS
PYDC5
ASB5
GML
TREML4
MTOR
MRPS14
AAR2
HEXIM1
TAF12
PLCD3
ACBD4
TAF5
RANGAP1
PUM3
EMC4
SLC4A8
MICOS13
HSD11B1L
MPDU1
LOC100996842
CD68
AKR1A1
GALNT6
ZNF565
ZNF146
ZNF19
CEP162
INSYN2B