ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9823127 | GM12878
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◣ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

DUX4
FRG2C
RANGAP1
PHF13
TIMM22
STARD10
ZNF286A
IFRD2
IPO13
TNFAIP1
IFT20
PSMC4
MICOS13
HSD11B1L
TBC1D23
AP2S1
MRPL24
SCGB1C2
SCGB1C1
GSPT1
ZNF331
ERCC4
GAL3ST3
SF3B2
SEC11C
ACIN1
C14orf119
RPS27A
CLHC1
STMN3
RTEL1
PAFAH2
CXXC1
ZNF414
TMEM245
NOLC1
MMACHC
SERTAD3
STIL
ANO10
PSMD2
ZNF256
MTRNR2L1
CLPB
PHF12
GTF2H4
EIF1B
TERF2
ZNF565
ZNF146
FAM193A
MEA1
DUS3L
SYMPK
FOXA3
MPI
OSCAR
NDUFA3
CARM1
ZNF268
ZSWIM9
LIG1
FBXO48
APLF
APEH
SLC4A2
CDK5
REXO1
ZSCAN22
ZNF56
ST3GAL2
PRCC
ATP6V1FNB
ATP6V1F
LRRC29
CEP128
GORASP2
NT5C3A
FZR1
PIK3R2
DAXX
CNPY2
SRRM2
SAMHD1
NEURL4
SLC39A1
CRTC2
CFAP20
ZCCHC8
CHMP5
BAG1
TMEM143
SYNGR4
N4BP2L2
ZW10
ZNF180
PA2G4
ZNF133
KPTN
BTRC
TSPAN17
TBC1D31
ABLIM2
DNAJB12
EPRS1
SERF2
GATB
PEMT
FTSJ1
CCDC200
RETSAT
ELMOD3
STXBP3
GSK3A
ACP6
SPNS1
EIF1AD
BANF1
MPHOSPH10
MCEE
RPGRIP1L
FTO
C12orf43
NSFL1C
POLR2E
PGM2L1
UPK3BL1
PI4KB
ZNF408
ARHGAP1
FOXP4
PKD1
SCNM1
LYSMD1
ETFDH
C4orf46
ZNF227
PANK3
TMEM139
CASP2
ZNF500
PRRG2
NOSIP
CNIH1
CNIH4
DNAJC16
CASP9
HEXIM2
PFKFB4
AHCY
ZNF557
UBR2
WBP1
INO80B
SDCCAG8
CEP170
RBBP5
MFN2
CDC6
C1orf74
BARD1
ZNF7
SMPD3
ABCF3
EXOC3L1
E2F4
TMEM201
SPHK2
RPL18
FAM83E
HAUS6
FAM72C
DCTN1
FAM72D
ZNF547
TRAPPC2B
ADCK1
DNAJC28
SMIM12
THOC3
TBL3
RNF151
C1orf159
STK25
C19orf67
ZFP90
NOP16
HIGD2A
ATL3
USP35
KCTD21
CACTIN
RNASEH1
TXLNG
DOP1B
PLTP
ZNF546
MAP2K7
LINS1
ASB7
ESCO2
CCDC25
PELI1
RPL13A
RBIS
SNAPC3
TMEM199
POLDIP2
FAM98A
ZMAT5
UQCR10
WDPCP
MDH1
ENDOG
UTP6
ZDHHC16
EXOSC1
SNAPIN
THOC6
HCFC1R1
TNFRSF12A
PRKCSH
CCDC151
TMEM59
TCEANC2
DGAT1
RIC8A
BET1L
PNKD
AAMP
PLAUR
RPL37
U2SURP
TMEM191C
ERICH4
DMAC2
FBXO9
CILK1
EIF4B
MZF1
SSBP1
BNIP1
NYAP1
TSSC4
SYNCRIP
CNOT1
METTL25
CCDC59
TPR
ODR4
CCAR2
C8orf58
CCDC150
SEC14L1
GAPVD1
FAM220A
TMED4
DNAJA3
RPP40
ITGB3BP
EFCAB7
BANP
PARP2
FNTB
FAM168A
TMEM115
ATR
PPP4R3B
FBXO46
ZNF446
ICE1
BUB1B
INVS
ERP44
TOP1
RPL26
ZNF25
EFHB
RAB5A
KIFAP3
LYSMD3
TOR1AIP2
TOR1AIP1
ZNF134
TFB2M
CNST
YTHDF1
ZNF444
LARS1
KANK2
SETMAR
RPL27
CYB561D1
MRPL11
HIF1AN
RAB1B
SLC35B1
CYP20A1
INTS9
HMBOX1
ZNF14
POLR3F
DZANK1
KBTBD6
NACA
MBD1
AFG3L2
AURKAIP1
RMND1
ARMT1
SDE2
MRPL15
CC2D1B
MAMSTR
TRIP4
SLC24A1
SNX17
EIF2B4
MAPK1
TSNAX
RPP14
HTD2
TMEM18
SNRNP70
DUOXA1
DUOXA2
DUOX2
SKP2
LMBRD2
SLC33A1
ZNF383
COG2
ATP6V0D1
AGRP
ZNF576
IRGQ
CTU1
NAA35
RTTN
MEMO1
CEP350
CTDP1
DIXDC1
C8orf76
CRYAB
CLPX
ZMPSTE24
TSGA10
RAB18
C2orf15
DHX8
RNGTT
SIVA1
PAK2
UBFD1
EARS2
CEP162
IQCB1
EAF2
FDXR
POLR3H
EIF2D
LRRC37A3
FEM1B
VKORC1
SEC61A2
SUFU
ACTR1A
CLPP
SPG21
CCL5
TMEM68
TGS1
RAB5C
PHB
EMILIN1
COPS7A
RPL18A
MCCC2
LONP1
CATSPERD
PLD3
C19orf47
ZNF497
TIMM17A
KMT5A
GTF2B
TPGS1
MZT1
BORA
WWOX
ARHGAP9
ZNF416
MARS1
ZNF764
LIMK2
ZNF816-ZNF321P
ZNF816
WDR54
C2orf81
PLK3
AMBRA1
RIC8B
SPAG4
EIF1
STK11IP
RCE1
SARS2
MRPS12
SAC3D1
TIGD2
SCAND1
TRUB2
COQ4
FAM228B
SF3B6
NMNAT1
LZIC
NOL11
MTRES1
AKR1A1
NDUFV1
EYA3
DHX9
PARD6B
CIBAR2
SOCS5
CNOT4
STRN
COX14
PRPSAP1
ATP5MPL
KLHDC10
FEM1A
ZNF773
SLC25A11
RNF167
RPS3A
PPRC1
TESK1
DCAKD
PIGO
NMT1
CRELD2
ALG12
DCP1A
DRG2
KIFC1
OSGEP
APEX1
BMS1
PTPN4
SERBP1
GET4
PGRMC2
TSNAXIP1
RANBP10
MIGA2
SAYSD1
DTWD2
LOC100289561
NUDCD1
ASNSD1
ASDURF
SH2D3A
VAV1
MRPL34
TVP23B
MRPL42
ABHD8
DET1
DDA1
SLC25A23
CRB3
KRBA1
HMGB1
USPL1
ZNF585A
AGA
FBXL19
SLC10A7
TARBP2
MAP3K12
CAD
AP2M1
ATRAID
SLC5A6
PUM1
CBWD5
CBWD3
CBWD6
IBA57
BORCS5
MYBL1
NHEJ1
SUCO
ZNF586
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MFSD8
ABHD18
PABPC1
PSMC5
FTSJ3
DHX35
POLD1
LHPP
NME1
ELAC2
EXD1
CHP1
EIF3C
EIF3CL
RABL2A
ZNF189
MRPL50
RPL23A
RAB34
RAB8A
RALGAPA2
ATP8B3
CPPED1
RPL22
MARK2
ASB6
NOC2L
KLHL17
CRK
TMEM52
CALML6
DCLRE1B
AP4B1
C1QTNF6
CALR3
C19orf44
LYPD3
TMEM141
TBC1D13
PSMD11
VPS26C
WDFY2
HBS1L
FARP2
TMEM205
CCDC159
PHF23
GABARAP
PAIP2
AP1M1
FAM185A
CCL25
SMIM13
ZNF324B
RPA2
RANBP3
HACL1
BTD
SLC7A6OS
PRMT7
PCM1
TXNL4B
DHX38
ADCK5
EEF1G
TMED10
TMEM242
STAG3
GPC2
GGT6
ZNF260
MYBBP1A
CSNK1A1
GBA
FBXL12
ZNF527
DFFB
CEP104
RAD50
ABI1
TMED1
PCP2
XAB2
UBE2B
CDKL3
ASCC2
SLC35B4
CDK5RAP3
RPS11
TSACC
CCT3
UQCC2
ELMOD2
ZNF573
MEIOSIN
NPAS1
SENP2
ZFP1
CARNMT1
PDHX
APIP
PLEKHM3
ZNF461
RPTOR
SNX1
CIAO2A
SUGP1
MAU2
ZSCAN32
ZNF174
TTC9C
HNRNPUL2
MYD88
ACAA1
MRPS31
TMEM79
SMG5
SART1
PEX16
LARGE2
MRPL38
DIMT1
GPANK1
CSNK2B
C6orf47
LY6G5B
NIFK
LUC7L2
FMC1-LUC7L2
FMC1
PDCD2
DNM1L
MIB1
PLCD1
RDH11
MIA3
CBR4
RRP9
PARP3
TIGD4
ARFIP1
PFDN4
SMPD1
SLC39A13
PSMD3
DYNC1LI1
ZNF350
CDK11B
CDK11A
SKIV2L
NELFE
SLC16A13
FAM177A1
TELO2
CEP131
PTX4
CCNI
CCT2
TBC1D30
GNS
SF3B5
LMBRD1
CIPC
TRAPPC3
RPS7
FAM71E1
EMC10
GTF2H5
RNF149
ZP3
CCNB1
KDM8
RWDD1
VHL
SHISA5
LMF1
ELP3
YIF1B
KCNK6
ZNFX1
MARCHF8
KCNJ15
THEM4
FRG2
SMCO1
FAM209A
TATDN2
WDR74
YPEL3
COL23A1
MAMDC2
AADACL4
UBE2F
MUC3A
BSDC1
MTRNR2L2
MSH3
DHFR
MBOAT4
TMEM89
IRAK2
SNX16
ZNF562
EXTL2
MTRNR2L8
DUSP6
DEGS2
FAM153B
DBNDD2
CTAG1B
CTAG1A
FAM184A
PDE11A
SNCG
MMRN2
ST20-MTHFS
FAM227B
DTWD1
RABGAP1
TBX6
CBX1
ZNF572
TMEM229B
TXNRD2
FEM1C
APOA1
NUF2
COL18A1
PAXBP1
APOBEC3B
MTF2
BCAR3
BCR
ARHGAP39
LEP
ZNF761
STX16
DMAP1
SUMO3
OR4K17
MON2
TLR2
PRRT1B
SAMD4B
C2orf88
PRSS38
SF3A3
GSTM5
GPRC5C
ACYP2
SCCPDH
ANP32D
RFC1
MED23
FAAH
NDUFS7
ST6GALNAC6
RBPJ
ACAA2
BAAT
SDR42E1
SLC1A7
IGFALS
CEP85
COX16
TTLL12
ADCY10
RPS29
CCDC130
PEX3
ADAT2
TMEM41A
RAB37
SEM1
IL21R
KMT2A
INTS12
GSTCD
ZNF117
CEP72
SLC27A5
YWHAQ
ZNF623
SATB1
CALCB
FRA10AC1
TMEM70
ELOC
PPIG
GPD1L
IL36A
DCAF10
RBM33
IFT88
JMJD1C
PLEC
CYP17A1
MRPL44
MAPRE2
MROH7
GDPGP1
CIB1
POLE4
SULT1C3
ZNF577
NDUFB3
FAM126B
NOS3
DSTYK
RABGAP1L
TTC32
NPAS4
CALD1
ACOX3
C19orf18
HERPUD2
NARF
ZNF317
TBC1D19
POLR2J3
ZNF426
ZFP30
GTF2H2
CLK4
STX18
TMEM43
CHCHD4
SELENOH
CFHR4
PNPLA7
TOP3B
TRMT44
APOL4
DPY19L4
ENG
PRELID3B
TMEM14C
ATP1A1
ZSCAN31
SMARCD2
COMMD2
GALNT1
ADI1
DNAJC25-GNG10
DNAJC25
TARS2
PSEN1
ZNF561
POLR3B
PPIP5K2
ZNF792
TMEM62
RBBP9
RPS14
LIPA
NME4
GSTA4
ALG10B
TFPT
PRPF31
YTHDC2
TATDN3
NSL1
CYBC1
RERE
KDM3A
CLDN16
UTP3
PDCD7
SLC44A1
SLC25A51
CAT
MAD1L1
TDP2
ACOT13
GTF3C3
FRG1
IPO4
LMLN2
SFT2D3
SLC41A3
REEP3
PIK3R1
ANKRD54
RAD54L2
EIF3F
INTS5
VTA1
NMBR
EIF3L
EPS8
ATF7IP2
YY1AP1
DAP3
SMG8
AUH
THAP11
NUTF2
LSG1
GTF2H2C_2
GTF2H2C
ZNF341
SUPT7L
SLC4A1AP
CATIP
YJU2
CENPT
PARP15
ACTL8
ZNF32
MRPL40
HIRA
GOLM2
FBXO31
HTR5A
BAIAP2
RPL11
STAT3
ITGA4
TMEM44
CAMK1D
REXO4
ADAMTS13
PDE4DIP
SNIP1
DNALI1
INO80C
PPP6R1
KDM1A
WDR36
SEC22B
TEFM
GCNT3
GLO1
FGD3
MSRA
DRAP1
C11orf68
ZNF841
C3orf14
CDK5RAP1
TACO1
GINS1
RNF187
ZNF829
ZNF568
PPP1R11
LCN8
RILP
SNAP47
NEMF
PRIM2
PSMF1
ESR2
USP30
THOC5
COPS7B
ORC4
MBD5
NBN
SLC2A7
FAM207A
REN
DEK
MTERF4
EFCAB10
MRPL21
IGHMBP2
SCMH1
CCSER2
JMJD4
HSD17B6
SGCE
PEG10
ZNF391
ZBTB45
WDR11
TMEM222
ILF2
LARP1
MTRNR2L9
FGFBP3
CCDC97
ATP5MC2
KANSL3
FER1L5
POLR3E
SLC29A2
SUPT6H
SDF2
ZNF540
DUS1L
TTC26
SAR1B
MOB4
C1orf167
MRPS18C
HELQ
METTL8
DCAF17