ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7030917 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◣ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KCNJ15
FAM227B
DTWD1
PSMD6
KRBA1
CCDC200
BCAS4
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SMCO1
KMT2A
EIF2D
THEM4
MTRNR2L2
MSH3
DHFR
DUX4
STX16
SMARCD2
BMP7
FRG2C
KDSR
MTRNR2L1
PFDN4
ZNF217
SRRM3
MUC3A
WDR74
DCLRE1B
AP4B1
N4BP3
POLR2J3
MUC12
SNX16
B4GALT7
IQSEC3
ZNF76
ATP1A1
DGKZ
NCOA3
TXNRD2
WWOX
HTR5A
SLC39A13
NEDD9
TTLL12
ARHGEF1
NFAT5
COL23A1
MTRNR2L8
CALM1
TBX2
AP4E1
RBBP5
ACSF3
ATXN7L1
FZD1
PREX1
NSFL1C
GBA
BCL11B
GSTM1
MRPS23
MKRN2OS
MKRN2
ZCCHC4
SEC13
CTNNB1
FRA10AC1
GNAL
RAB37
FRG2
CHD1L
PRKAB2
BRWD1
OPA1
DPY19L4
PDE4DIP
DEGS2
ZNF341
C3orf14
USP32
APPBP2
SMG8
GTF3C3
FAM209A
DRAP1
C11orf68
LSS
NOXA1
TRIM3
KAT6A
DHRS13
ARFGEF2
DSTYK
PNPLA7
PUS7
PRELID3A
OAZ3
GNAS
KANSL3
FER1L5
UPK3BL1
SSBP2
TRIB1
C18orf25
SDK1
PRRT1B
ZNF609
HMGB1
USPL1
PRRC2B
SLC44A1
POLR2J
GSTM5
TPM1
ALG10B
MRPL1
TARS2
SLC24A1
PEX3
ADAT2
SLC33A1
CRBN
UCHL5
RO60
TRIP4
ERVW-1
RNFT1
ARPP19
WWP1
CUX1
HEATR6
CCDC130
PPP5D1
CALM3
SF3A3
WDR11
RINT1
TEX14
PPM1D
MAD1L1
ANGEL1
C7orf26
USP30
BPTF
ATR
NFYB
ZMYND8
RBBP8NL
RAD51C
OTUD7B
BRD3OS
MAIP1
VPS37D
KRTDAP
DRG2
MIS18BP1
LYSMD2
TMOD2
BANP
EIF3F
GTF2H4
PPP6R1
METTL9
USP8
ATP6V1FNB
MRPS31
ZNF398
CLUL1
GNB2
FAM102B
DDX59
ITPK1
CFHR4
NEMF
SLC37A4
ZNF212
HECTD1
MYL12B
EPS15
SUMO3
SCCPDH
LUC7L2
FMC1-LUC7L2
FMC1
TBC1D19
MRPL40
HIRA
RBM48
PEX1
KMT2C
C1orf53
ATAD2
NDUFAB1
ARHGEF12
SGCA
MYO5B
ATP8B1
MON2
FAM207A
FUT1
FGF21
DCP1A
CADPS
ASNS
SNX27
FAM3C
IGFALS
HSPE1-MOB4
HSPE1
HSPD1
LSMEM1
GPRC5C
ADPGK
FOXK1
TBX4
ARHGAP39
RPS20
NCBP3
PRKAG2
MUC1
INO80C
ZNF425
PARD6B
SNRPB2
CIZ1
NOL11
USP3
DNM1
MTRNR2L9
RBM28
TEX9
RFX7
RBSN
PDAP1
BUD31
CRYBG1
DVL3
TDRD5
RILP
RRP8
ILK
IGSF5
NOP16
HIGD2A
TRIM37
ASB6
EXOC2
ANKRD36C
HOOK2
ZNF467
AMER3
NME1
NRBP2
CNOT6
KCNH6
GNAI2
PPP1CC
SLC27A2
RBL1
ATP5MPL
ZC3H6
AP1G1
MTERF1
POR
TEX2
SSBP1
GFI1B
TSC1
RCOR3
NUDT4B
NUDT4
AHCYL2
ACAA2
GET3
IL17D
FRG1
LRRC37A3
USP15
VPS28
WDR73
NMB
SLC22A23
PIAS2
KATNAL2
RPS7
POLR3B
REXO4
ADAMTS13
EIF1B
MAPKAPK5
OSBPL1A
CIB3
CMTR2
KIAA1549
MAP3K2
ZNF860
OSBPL10
SCAMP5
MZT2A
EPG5
BCAS3
KRT3
LEP
COX16
FAM133B
TMEM65
NUP107
CELF6
HES1
GTF2H2
METTL25
CCDC59
UTP3
RAPGEF1
IMPACT
SBK1
PTPRN2
COLEC11
AGK
KRR1
RRP15
GTF2IRD2
VARS1
PPM1A
MCM7
AP4M1
PXYLP1
TDP2
ACOT13
ANKRD40
MDM4
ENOSF1
PARP10
MYO5C
GRINA
HIPK1
STEAP1
ZBTB7C
ITGB3BP
EFCAB7
AURKAIP1
DNAJC11
CPLX2
XXYLT1
COPS4
ZKSCAN2
ADAM22
LTBP2
ZNF165
GCLC
KCTD18
ATXN2
SYBU
NUF2
BMS1
TBC1D13
NPAS4
MAN2C1
ZNF282
NAPEPLD
GPRIN2
STX6
MEMO1
DNLZ
ROM1
EML3
WASHC5
NSMCE2
RNASEH2A
PRDX2
UPK3BL2
MED23
TECPR1
ACTR10
ZNF391
FAM228B
SF3B6
SKIL
SPPL2A
EIF3E
UIMC1
SLC39A4
CPSF1
RMND5B
PAK2
SMPD4
MZT2B
LRATD2
BCAS1
TNFAIP2
UBQLN4
LAMTOR2
KIAA0232
ZFAND4
TMEM121B
SCAND1
BNIP1
SCNM1
LYSMD1
CYB561D1
GABPB1
CDC25B
ZNF746
CENPB
PHLPP1
STX18
TACO1
WDR43
SERHL2
TPR
ODR4
AP3B2
RGS6
NUDCD1
MOCS1
RGS9
CDK18
KDM3B
ATAD2B
ISM1
SRRT
ANKS6
DLD
LRP12
IL36RN
IL36B
VWA8
C12orf73
DBNDD1
CEBPA
GAS8
SMARCC2
ETFDH
C4orf46
PALB2
DCTN5
SLC44A2
TMEM134
ANKRD46
PRKCE
RNASEK
C17orf49
ATMIN
RASA4B
GSAP
MYBPC3
ST6GALNAC6
ZNF317
SNRPE
KLHL22
IRAK2
TMEM41A
SAMD4A
DDX1
ZNF3
EDC4
RANBP2
SYT7
ACVR1
TSEN54
CASKIN2
RASEF
NCAPH2
LMF2
C1orf21
UNC5A
TNNT2
COLEC12
PRPF18
LPIN2
CLCC1
RNF166
NIBAN2
CTU2
IGF1
SIGLEC5
SNX17
EIF2B4
C18orf21
VPS72
PDS5A
TUBD1
RPS6KB1
NKX1-1
BRINP3
KLC1
MTF2
INTS12
GSTCD
INKA2
DDX20
SYPL1
SRI
FAM83A
ZMYM2
NMT2
LRFN2
FECH
GRHL2
MRPL44
CDYL
SETD1A
DDX41
GIGYF1
SLC25A15
ADRM1
HUS1
CASC3
AAMDC
RSF1
ZFP62
KLHL25
HDGFL3
RHOT2
PDE8A
EP400
ACTR3
AMOTL1
SMAD7
RORC
C2CD4D
RNPS1
ZFPM1
TMEM68
TGS1
EPS8
TRUB2
COQ4
FOXP4
CUEDC2
LAMTOR1
GPATCH1
PRKAR2B
POFUT1
PLAGL2
TBC1D9B
RIIAD1
INTS4
RP9
MYO5A
KCTD3
BCL2
FA2H
ETNK2
CCDC174
TXNRD1
C4orf3
NOL7
GORASP2
FAM184A
NR1H3
ACP2
GCFC2
ELOVL2
PCBD2
EED
TPBGL
SSH1
GREB1L
PDE11A
RBM45
MFAP3L
ELF2
DIAPH1
HDGF
TGIF2-RAB5IF
TGIF2
TC2N
WDR24
NOC3L
OGFOD3
HEXD
KIF21A
SLC48A1
RABL2A
TRIM56
SYNM
KCNB1
LACC1
CCDC122
WDR36
CCDC97
CLTB
SELENOT
CRH
NUCKS1
ZNF276
VPS9D1
IVNS1ABP
TESMIN
DDR1
PAXBP1
RPS29
PSMD3
ELAVL3
WIZ
UBE2Q1
CAPRIN2
TEX261
RAB12
NEUROD4
NPEPL1
PTPN18
IL36A
CLK4
TSN
RUFY2
WASL
GUSB
RNF115
POLR3C
ATXN7
ARHGEF28
MSI2
AARS2
NPIPB9
CGRRF1
SFTPC
STXBP5L
GTF2F2
SUSD6
KLF2
DNAJC25-GNG10
DNAJC25
EIF1AD
BANF1
DHX16
ZNF579
USP46
BCAP29
MET
CLDN3
ATG101
SFSWAP
TIMM9
KIAA0586
DGKH
ZNF687
CTNND2
EBAG9
BRIP1
NIFK
ZFP30
POLR3E
HNRNPD
CDC73
ZNF296
GEMIN7
GTPBP10
CSDE1
TSKU
SIKE1
ZNF148
SNAP29
PI4KA
VMAC
NDUFA11
TTC6
FOXA1
RPL37
ZNF408
ARHGAP1
ZNF280D
TRAM2
BHLHE40
JRK
KLHL12
RRP1B
HSF2BP
WASHC2A
TPGS2
TRIM33
RNF169
TFRC
ATXN7L3
GSC
SCGB1C2
SCGB1C1
PPIP5K2
U2SURP
XKR7
CELF1
BCL3
RNF215
SLC26A4
THAP12
GVQW3
NRAS
NOM1
BTG2
TRABD
TRIP13
BRD9
ANP32D
INTS5
CLTC
HEATR4
CERK
NPL
DCTPP1
ZNF641
OTULIN
PRICKLE1
CLK2
RCE1
FANCC
ADRA2B
CYP24A1
TOP3B
ATXN7L2
TMA16
CYREN
CLK3
PTCD1
CPSF4
PCYT1A
CBLL1
SPRR2F
PLEKHG4
TLK2
ITGB4
C2orf88
PSMF1
MTR
METAP1
AQP10
GOLGA3
ZNF354A
PPFIA4
DNPH1
ADCK1
CARM1
MED12L
SMAD2
HARBI1
ATG13
CFAP53
GUCA2A
PRELID3B
MRPS18C
HELQ
CPPED1
NDFIP1
WDR70
USP42
ADIPOR1
KANK2
REPIN1
MRPS21
UBTD2
SEMA3C
ARHGEF11
THOC7
TPK1
MRPL3
SNX18
IQCH
AAGAB
PHAX
UBR3
METTL5
ELK4
CTNNA1
DOK7
RPS10-NUDT3
RPS10
PDE9A
MNX1
TMEM70
ELOC
MAPK1IP1L
FITM2
TUT7
S100P
CCDC71L
EFCAB11
SELENOM
TDP1
DPY19L1
HBEGF
HMGN1
ALDH3B2
ZMPSTE24
ERCC6L2
QSOX1
CEP135
SPIDR
MPHOSPH6
GTF2IRD2B
TTC23
LRRC28
SAMD4B
MICALL2
ADARB1
BOLA3
AP5B1
LOC100287896
LIPT2
PURB
C11orf24
PRMT6
CLDN9
YPEL3
TBX6
GRPEL2
GK5
ZNF790
OXR1
SCRIB
NXPH3
IMMP2L
DBN1
KPNA1
ATE1
RAP1B
SQLE
VRK1
TVP23B
STXBP3
PDE2A
TADA1
ZNF718
ZNF595
LEO1
ERBIN
PPP1R9A
PTBP3
MPP5
CDC42EP4
PGBD1
ZNF592
GAB1
CBX1
SFT2D3
EFCAB10
NOTCH2
SMIM13
RNF6
PFKFB3
UBE3B
KCTD10
DYNC2I1
C7orf25
ARL6IP1
ATL2
SRPK2
ADPRHL1
ATXN1L
MAPT
UBE3C
YOD1
PFKFB2
RBM38
TPPP
MMP25
APOL4
GLIPR1L2
LIG4
ABHD13
TEX38
ATPAF1
PAIP1
ZNF485
CERS2
TMEM14A
UNC5B
ZNF70
VPREB3
MAPK8IP1
PLEKHM3
MRPL22
GEMIN5
TRNAU1AP
CIPC
KDM2A
PSMC2
DNAJC2
PRICKLE4
FRS3
MRPS5
SAV1
TMEM63B
MRPL14
CKB
MRC2
COPS7B
GTF3C5
PDE6D
MRPL39
SPHK2
RPL18
FAM83E
DYRK4
EEF2K
LIMS1
NCKAP1
ZBTB7B
SPIRE2
ATG14
SLC6A6
UTP4
DERPC
CHTF8
SLC29A2
HEXIM2
NOTCH1
ZNF318
RPS6KB2
DENND4A
SUMF1
ZNF821
CAPZA2
FHDC1
LMX1B
SLC25A51
POLR1F
KLF3
YIPF2
TIMM29
ZXDC
PPP2R3A
MYO15B
BCAR1
RNF114
WDR72
ADRA2C
FGFBP3
RPS3A
TRMT1
NACC1
LEMD2
SPACA6
ELAPOR2
ALDH5A1
CCDC92B
SYK
XPO4
MAPK4
PPP6C
NDUFC2-KCTD14
NDUFC2
TATDN1
NDUFB9
SAMD1
WDR41
RNF19A
DET1
SRCAP
LOC730183
UBE2Z
MAZ
RPS14
AMBRA1
TMEM199
POLDIP2
CXXC1
LTBR
PEX11B
PODXL
SND1
DYNLL2
ZYX
FAM131B
HRH3
TELO2
ACHE
UFSP1
PTX4
DCAF10
SMG7
C6orf89
AAAS
PPIL1
CORO1C
THOC1
CRYM
SLC25A40
DBF4
MARCHF6
SOCS3
SQSTM1
MGAT4B
CUL1
TRPM7
KANSL1
MRPL38
KLF4
RXRA
RCOR1
PABPC1
RNF138
ARAP2
DPYSL4
SOX13
GFM2
NDUFS3
KBTBD4