ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1945293 | hESC WIBR3
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◣ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

FAM153B
DUX4
KCNJ15
SNCG
MMRN2
FRG2C
THEM4
TATDN2
ST20-MTHFS
AADACL4
LMLN2
TMEM89
SNX16
IRAK2
FAAH
SULT1C3
BCAR3
FAM209A
LEP
CALD1
SARS2
MRPS12
FRG2
CFHR4
YPEL3
ACYP2
FAM184A
ZNF562
TMEM14C
OR4K17
TMEM229B
CALCB
MUC3A
AKAP10
RBPJ
ACSM2B
PDE11A
COL23A1
GSTM5
ACAA2
MON2
CYP17A1
BAAT
LSS
FEM1C
CASP4
FAM227B
DTWD1
GPR82
SUPT6H
SDF2
ZNFX1
SLC27A5
ANP32D
UBE2F
TXNRD2
CD200R1L
CNOT3
IFT88
DPH2
EXTL2
ATP9B
APOL4
SCCPDH
SMCO1
ADI1
UGT1A3
TNFRSF6B
C2orf88
CADM2
GTF2A1L
CERS5
SMIM31
CASP10
MBOAT4
TLR2
CEP85
ZNF117
EFCAB10
GCNT1
DGKQ
PNPLA7
NOS3
GTF3C5
ZNF792
ZNF841
ESR2
NUDT9
SATB1
ACOX3
TRMT44
CATIP
SPRR2F
ZNF280D
ACSM2A
FABP6
BCR
PUS1
PDCD7
SEM1
C3orf14
NSUN7
TMEM62
ITGB3BP
EFCAB7
SERHL2
RTCA
GAS2L3
POLR2J2
FASTKD1
IGFALS
PLEKHA5
TEX50
C1GALT1C1L
TCF4
DLAT
CYP4X1
NARF
CYBC1
CCDC200
C1QA
OR2AP1
RFC1
GPD1L
HEATR4
BCKDK
PTCH1
CPA1
HSD17B4
PHB
GORASP2
ZNF324B
DUSP16
ARL17B
PTGES2
TAAR9
ADCY10
SRD5A3
THAP11
NUTF2
CENPT
MPHOSPH8
N4BP2L2
NFE2L3
TFPI
PRSS38
OR8B3
MRPS36
ZNF761
EIF1
ZNF583
SET
PDGFRL
CTAG1B
CTAG1A
SCGB1C2
SCGB1C1
KIF2C
KRBA1
MTRNR2L1
WDR74
MAMDC2
BSDC1
MTRNR2L2
MSH3
DHFR
MTRNR2L8
DUSP6
DEGS2
GBA
DBNDD2
RABGAP1
TBX6
CBX1
ZNF572
APOA1
NUF2
COL18A1
PAXBP1
RBBP5
APOBEC3B
MTF2
RPS7
ARHGAP39
SSBP1
STX16
DMAP1
NOTCH2NLC
AURKAIP1
SUMO3
NOTCH2NLB
NOTCH2NLA
LUC7L2
FMC1-LUC7L2
FMC1
PRRT1B
SAMD4B
SF3A3
PUM1
GPRC5C
MED23
NDUFS7
ST6GALNAC6
NME1
SDR42E1
SLC1A7
BANP
COX16
TTLL12
RPS29
DCP1A
CCDC130
PEX3
ADAT2
TMEM41A
RAB37
EIF2D
IL21R
KMT2A
INTS12
GSTCD
CEP72
YWHAQ
ZNF623
TMEM242
RPL27
ZMPSTE24
FRA10AC1
TMEM70
ELOC
PPIG
IL36A
DCAF10
RBM33
JMJD1C
PLEC
MRPL44
MAPRE2
MROH7
GDPGP1
CIB1
POLE4
ZNF577
HMGB1
NDUFB3
FAM126B
DSTYK
RABGAP1L
TTC32
NPAS4
USPL1
SKP2
LMBRD2
C19orf18
HERPUD2
ZNF317
TBC1D19
TRIP4
POLR2J3
ZNF426
ZFP30
GTF2H2
CLK4
STX18
TMEM43
CHCHD4
SELENOH
TOP3B
SLC24A1
DPY19L4
ENG
PRELID3B
ATP1A1
RPL37
DRG2
TOR1AIP2
TOR1AIP1
ZSCAN31
SMARCD2
COMMD2
GALNT1
SLC33A1
PAFAH2
DNAJC25-GNG10
DNAJC25
NSFL1C
TARS2
MRPS31
PSEN1
ZNF561
POLR3B
PPIP5K2
RBBP9
RPS14
LIPA
NME4
GSTA4
METTL25
CCDC59
ZNF408
ARHGAP1
ALG10B
TFPT
PRPF31
YTHDC2
TATDN3
NSL1
RERE
KDM3A
CLDN16
UTP3
SLC44A1
SLC25A51
DNAJB12
CAT
MAD1L1
TDP2
ACOT13
GTF3C3
FRG1
IPO4
ZNF134
SFT2D3
SLC41A3
REEP3
TIGD2
PIK3R1
ANKRD54
RAD54L2
EIF3F
GTF2H4
INTS5
VTA1
NMBR
TMEM68
TGS1
EIF3L
EPS8
ATF7IP2
YY1AP1
DAP3
SMG8
AUH
LSG1
GTF2H2C_2
GTF2H2C
ZNF341
SUPT7L
SLC4A1AP
YJU2
PARP15
ACTL8
ZNF32
MRPL40
HIRA
GOLM2
FBXO31
HTR5A
BAIAP2
RPL11
STAT3
ITGA4
TMEM44
CAMK1D
REXO4
ADAMTS13
PDE4DIP
RTTN
SNIP1
DNALI1
INO80C
PPP6R1
KDM1A
WDR36
SEC22B
TEFM
GCNT3
EIF1AD
BANF1
GLO1
FGD3
MSRA
BMS1
DRAP1
C11orf68
CDK5RAP1
TACO1
GINS1
RNF187
ZNF829
ZNF568
PPP1R11
MMACHC
LCN8
RILP
SNAP47
NEMF
SCAND1
PRIM2
PSMF1
ATR
USP30
THOC5
COPS7B
ORC4
MBD5
NBN
SLC2A7
FAM207A
SNX17
EIF2B4
REN
DEK
MTERF4
MRPL21
IGHMBP2
SCMH1
CCSER2
JMJD4
HSD17B6
SGCE
PEG10
TRUB2
COQ4
ZNF391
ZBTB45
WDR11
TMEM222
ILF2
LARP1
MTRNR2L9
FGFBP3
CCDC97
ATP5MC2
KANSL3
FER1L5
POLR3E
SLC29A2
ZNF540
DUS1L
TTC26
SAR1B
MOB4
C1orf167
MRPS18C
HELQ
METTL8
DCAF17
FAM133B
MRPL1
ZNF571
HSPE1-MOB4
HSPE1
HSPD1
WDR43
SAMD4A
RMND1
ARMT1
DPP9
KLHL20
BNIP1
SPAAR
MRPS23
GALK2
ZNF226
C17orf75
NRBP2
IST1
LGR5
HYAL1
MTIF2
ZBTB40
SCNM1
LYSMD1
CLTB
GTPBP3
CD47
ANO8
MMP7
KIAA1549
GFM2
CPPED1
OAZ3
TUT1
GABPB2
COLEC11
CANT1
ZNF609
HACL1
BTD
WDR55
C16orf54
COPS4
DDX18
CTNNB1
TEX46
TMEM79
SMG5
CHD1L
GASK1A
SEC13
EXO5
ZCCHC4
SNRPB
ANXA2
BRWD1
MRPL48
MAIP1
RUVBL1
POLG
GRPEL2
NDUFS3
KBTBD4
NR1H3
ACP2
NCOA7
OTUD7A
ATF7IP
TTI2
RPS20
NUP54
RMDN2
RAB30
ZNF566
MLEC
CBWD5
TPR
ODR4
ZSCAN25
C18orf21
STAU1
LZTR1
MAN2C1
OPA1
FBXL12
CFAP298-TCP10L
CFAP298
NOTCH2
TMEM114
MRPL30
MITD1
ARID1A
TPM1
DCLRE1B
AP4B1
C8orf37
CCNC
PIN4
DGKZ
AFAP1L1
ADNP
GPAM
CD14
CBWD3
TMEM101
TTC4
MNAT1
PRPF18
FAM228B
SLC45A4
GOLGA5
B4GALT7
KLRD1
ADRM1
SLTM
KLHDC9
CCAR2
C8orf58
H4C8
ANK3
PCP4L1
TMBIM4
BCL9
TSGA10
NOP16
HIGD2A
ADPRS
METTL9
SLC39A13
TLNRD1
HNRNPD
EPRS1
CLDN4
EIF3E
RNASET2
TPK1
SF3B6
CCDC150
COX7A2
GMPS
TMX2
MED19
PSRC1
PDE6D
TEKT2
ZNF398
PSMD6
CDYL
MTBP
MRPL13
CCNI
SUGCT
MPLKIP
SDHAF3
BRF2
TSFM
ADAR
SLC38A9
SLC35A3
PSMD3
SRRM3
HUS1
LOC102724265
IAH1
CASC3
MATK
CCNT1
INPP5F
POLR1H
ALKBH3
ING2
COPS2
MED18
PHIP
TIPARP
REM1
DEFB124
PIGW
MYO19
PARP2
UBLCP1
TRIM38
NAA20
CENPV
SMU1
NCBP3
SNRPD1
RANBP1
AGK
SLC35E2A
CRKL
CDC73
PPP5D1
CALM3
ZNF772
TGFBR2
TTLL1
MRPL34
MRPL3
LRRC37A3
CLUAP1
GFI1B
SNRPB2
MTR
PLEKHM3
PRDX3
KRTAP10-8
TRMT2A
ZNF292
NFAT5
SMG7
SRSF7
SPSB1
NECAP2
TIMM22
KAT6A
LONRF2
VIRMA
WWOX
SACM1L
CCR6
FAM98B
MTOR
TRMT5
SLC38A6
SESN1
LNPEP
AARS2
ZNF165
CBWD6
RBM45
RAB18
RPL26L1
TTC13
PRKAB2
ARV1
SEC23B
TTC5
CDK19
AMD1
HAX1
ZSCAN30
SNRPE
ZNF438
TIGD1
EIF4E2
ZNF76
PPIAL4F
PPIAL4E
PPIAL4D
WWTR1
PIP4P2
MAGOH
CLTC
R3HCC1
TMED1
PDCD6IP
LRIG2
LRP6
FBXO38
COA6
RNF125
RPS15
MYCBP2
FOXN1
C2orf15
RBM28
PIH1D2
NKAPD1
STOML2
PUS10
PRRC1
PEX13
MRPS14
U2SURP
VPS13B
ZNF554
ALG10
PRKAG2
WBP1
INO80B
NBPF1
TEX9
RFX7
H4C12
LSM5
TIAM1
HIP1
ANKRD40
C10orf88
ZSCAN22
CALCRL
CEP120
DHRS2
AAR2
KMT2D
RPL5
STX6
MSL2
LPIN1
CEP57L1
MRPL16
SMIM13
TBCK
AIMP1
SUGT1
RCHY1
GSPT1
AVL9
CEP85L
CCDC88A
DDX1
POM121L2
NOXA1
MRPL39
ARRDC2
GABPA
ATP5PF
HLA-E
TARS3
CASS4
CLUL1
NMNAT1
LZIC
RNF6
TMEM42
PPP2R5B
NDFIP1
FAM234A
MAPK1IP1L
IQSEC3
KRR1
DHX16
MFF
ZZZ3
PRMT5
MEMO1
WDFY1
ITGAL
ATG101
PFKM
SNRPD3
GUCD1
SRP9
H4C11
MRPS33
PCBP2
SLC35E2B
ZNF425
YTHDF2
CREM
ABHD11
EPB41
ABCC10
ZNF512B
PTPN4
ZNF385A
SEL1L
ZNF546
SEC14L1
FBXO22
RESF1
TRAM1
TMEM65
GNB2
RRP15
CDIPT
CNN2
HNRNPA1L2
RPS19
GLIPR1L2
SGMS2
PDRG1
DHTKD1
SOD2
NUP107
ELAVL3
SLC35G5
MRPL19
C2CD5
PRPSAP1
MED4
TSC1
MTMR6
MAP1LC3B2
RPS3A
ASF1A
ZNF439
PPP1R3B
SDCCAG8
CEP170
TMEM259
TRDMT1
STK19
DXO
KNL1
EEA1
TBL1X
ZNF3
DNAJC11
CACNG1
RABGGTA
MUC1
LRRC59
SETD1A
ZNF383
LTA4H
SLC35B1
CUL2
YBEY
MCM3AP
ZNF846
SLC9A1
CNOT11
HEXIM1
GRAMD4
MIS18BP1
PES1
MMEL1
CPLX2
ATXN7L2
ARMH3
POLR2E
XKR7
ASNS
COG2
CCDC174
ERCC6L2
ATG4C
ZNF296
GEMIN7
RTN4
INTS4
TPM3
EIF2B3
PAK1IP1
C6orf52
WDR70
RPS26
NR1H2
RCAN1
CDK12
CRBN
POLR3GL
IFI44
ANKRD34A
SHF
INKA2
DDX20
RPL38
C11orf49
FLT3LG
RALBP1
PHF21A
DCT
SEC14L5
METAP1
IL36RN
IL36B
GARS1
NSUN4
LRRC61
CCDC115
ATAD2
TLR1
PRAME
CYB561D1
TVP23B
RUNX2
RAB5C
CELF2
DISP1
ATG5
P3H4
FKBP10
VWA8
ATP5MC3
ACBD6
NT5DC1
RIF1
CBR1
SMIM12
RBL1
ASPSCR1
FAM160B1
RAP2C
FAM13A
NNT
ABLIM1
CYB5A
FAIM
SENP1
FOXJ3
MRPS15
UGCG
ZNF770
HIBADH
ZMYM5
ZNF556
SLC39A3
PPIL3
NIF3L1
ZNF501
PRRG2
NOSIP
PTPRCAP
TMBIM1
PPP6C
TTC23L
ABCG1
STC1
ACTR3C
ZNF527
TM9SF4
METTL26
UBE2L3
HEATR1
RSAD1
EPN1
KCTD5
MEX3C
DNAJC24
DCDC1
TTC38
PKDREJ
RAD52
TSPAN10
NPLOC4
VN1R4
MAN2A1
DDX46
NMRAL1
HMOX2
ZER1
TMBIM6
CNGA1
INTS2
WDR31
ZNF30
WTAP
ALG14
TPM4
KDM3B
GRM4
CFAP20
IQGAP2
VRK2
PRSS22
CLEC12A
FBXW7