ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457586 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◣ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KRBA1
BSDC1
SUMO3
COL18A1
MTRNR2L1
RABGAP1
PPIG
CCDC200
KLHL22
LUC7L2
FMC1-LUC7L2
FMC1
MBOAT4
ST6GAL1
TMEM74B
IL36A
C1orf167
PRRT1B
C1orf158
TMEM191C
SARS2
MRPS12
SNIP1
DNALI1
DUX4
CCDC130
DNAJC14
CEP164
UBE2L3
PRELID3B
PLAU
GORASP2
ZNF623
SAMD4B
TATDN2
GUCA1B
DEGS2
PRAME
ZFP30
ATP1A1
MROH7
GOLGA5
KCNJ15
MAPK1
IL21R
BANP
ANKRD54
EIF3L
TRUB2
COQ4
ZFAND6
ATF7IP2
BCR
SNRPE
FAM153B
ADAR
BAIAP2
RPL26L1
RAB42
RAC1
GK5
NDUFS6
MRPL36
ENG
HLA-E
HDAC9
PAXBP1
UBE2F
LOC388813
CLDN16
RBM33
GPRC5C
ZNF572
RPS29
HK1
PARP15
STAU1
POM121L2
NUP214
NUP155
SYNJ2
WDR43
ARHGAP39
KLHL20
YWHAQ
TMEM41A
PPIL2
FOXN1
PIGW
MYO19
NME4
ZNF789
LONRF2
CLIC3
DBNDD2
POLR2E
GPX4
ZBTB6
GRPEL2
TMEM43
CHCHD4
RPAP1
CEP85
YTHDC2
FAM209A
NDUFS7
GBA
TXNRD2
MAP1LC3B2
ZZEF1
CYB5D2
OPN1SW
SMU1
SERPIND1
YY1AP1
DAP3
ITGB3BP
EFCAB7
SEPTIN5
GP1BB
ZNF761
TMBIM1
FRG2C
ARTN
CTAG1B
CTAG1A
CYP17A1
ZNF32
CFAP36
ZNF316
KRTAP12-2
FABP6
VHL
AUH
ADCY10
FAM13A
CLK4
ALDH9A1
MIIP
LOC102724265
AADACL4
FCGR1A
IGFALS
UTP3
SEC61A2
MAPRE2
YPEL3
TBX6
HTR4
GNL3L
TOR1A
BRD7
GPR3
NME1
ZCCHC24
FBLN2
ERVH48-1
TMEM89
PRPF3
PKMYT1
EPB41
TMEM62
REN
ZNF385A
LPIN1
RCCD1
DMAP1
SUB1
HAPLN2
C5AR1
ATG101
RNF215
ZBTB40
ZNF391
STX16
SPAG4
IFT140
CRAMP1
EXTL2
TANGO2
GRM4
MED15
RAB11FIP1
CBX1
C9orf16
SNCG
MMRN2
CLPTM1
NRCAM
NDUFA6
MRPL34
DDA1
TENT5B
PPP5D1
CALM3
WARS2
RFX2
GTF2H4
GATAD1
NRSN2
TIMM17A
CRKL
SPACA6
CASS4
PDE11A
FZD9
HDGFL2
RBBP5
GSTM5
SELENOH
CLTCL1
RPS14
ATP23
LZTR1
SLC25A16
CPA1
TMEM44
NBPF1
MTIF2
KRTAP10-9
RBBP9
PARP2
RAB5C
RIMBP3C
RIMBP3B
POLE4
TTC32
SLC1A7
SSBP1
POLR2J3
ODF3L2
TAF10
PSKH1
LSS
DCLRE1B
AP4B1
CACNG1
ERMN
JRKL
CCDC82
PGLYRP4
RERE
DNAJB12
ZNF438
ARFGEF2
N4BP2L2
CDK19
AMD1
MARCHF2
FEM1C
GABPB2
RTL10
GNB1L
NDUFA2
IK
PYCR1
AURKAIP1
RUBCN
ZNF439
OR2W3
TRAPPC9
ZMPSTE24
ZNF317
DDX27
TRIM52
RLN3
THEM4
ZNF562
SMIM13
MKNK1
BCL7B
SMG8
OR10H4
LEP
GNB2
CYB5R1
ZNRF4
ABHD3
FAM184A
STRIT1
GAL3ST4
APOBEC3B
P2RX6
LSR
HERPUD2
PPP6R1
PTPRF
AIFM3
AIG1
ZNF780B
ZNF487
RCC1L
UFSP2
C4orf47
PRIM2
TMCC3
NDUFB3
FAM126B
LRP6
FUT10
INTS1
CHEK1
PDAP1
BUD31
PPM1F
TMEM275
KLRC1
MON2
C8orf37
GLO1
SET
CNOT6
PPP6R3
IL15RA
NUF2
PAK1IP1
C6orf52
RNGTT
TMEM72
LRG1
DHTKD1
TYW1B
NBEAL2
CCDC12
BICD2
AFAP1L1
PKD1
CYP27B1
METTL1
EEF1AKMT3
MAP11
TONSL
ZNF408
ARHGAP1
KLHDC9
PPIH
SLC25A53
METTL25
CCDC59
PDE4DIP
CCAR2
C8orf58
COMT
RPL7A
MED22
SURF2
SURF1
KRTAP10-6
WDR74
NDUFS3
KBTBD4
CCNI
TM9SF4
KCTD9
CDCA2
PIK3R3
STK11
PTGES3
FUT1
FGF21
TSPAN1
P3R3URF-PIK3R3
P3R3URF
ZNFX1
RPS19
IDUA
TMEM242
UFD1
CDC45
INHA
OBSL1
SUPT7L
SLC4A1AP
YDJC
CCDC116
NR2C2AP
MAP1LC3C
NLRP2
FAAH
ARID3B
ZNF138
ATAD3A
MZF1
POLG
PDE7A
MOB1B
CCSER2
HTRA2
DQX1
DHPS
MTOR
RSAD2
AGO1
ARPC2
SDF2L1
SMN2
SMN1
SLC6A19
HARS2
HARS1
GGPS1
ARID4B
POLR3B
SPSB1
CFLAR
CMIP
FAM86B1
DDX21
TRAM2
GCLM
CSTF3
BSG
INO80C
HACL1
BTD
NUDT7
OR8B8
BIRC2
AJUBA
TRIM67
TUT1
PCTP
CCZ1B
DYNC2I2
ENDOV
RPS8
HOOK2
SLC38A1
TOP3B
PIH1D2
NKAPD1
PRRC1
MEMO1
HERC1
DGCR6L
RRP1
TRIM63
CALM2
DAXX
ZBTB22
KAT5
TAPBP
PROCA1
RPS15
GOSR2
ANP32D
ACTL8
RBL1
SRCAP
LOC730183
COG7
HDAC1
SMAP2
FOXP4
TMEM120A
CIBAR2
GNG8
NARS1
POLR3F
DZANK1
WASF2
DRC7
ST3GAL4
TRIM41
MGST3
SELENON
DIDO1
TRMT11
GID8
PLIN3
YME1L1
MASTL
GPX1
SDHB
SLC25A1
SECTM1
PANX3
MAD1L1
NR1H3
ACP2
PTGS1
SOD1
NICN1
RPL27
MAGOH
DPH7
CBR1
UBE3B
KCTD10
PAAF1
COA4
HYDIN
NRBF2
ARPC1A
OR8G2P
ACOX3
TRMT44
SLC27A4
DHX40
ADI1
ZFP69
INTS7
DTL
SUN1
DGCR8
HNRNPA0
WFDC3
DNTTIP1
SMYD5
KCNH2
SGTB
NLN
ADRM1
MFF
ACTL10
EFCAB13
C20orf144
KHDC4
NIPA2
NOS3
TTC26
CCNT1
ST7
KLF16
AGGF1
PHF19
GPR84
RPN1
RNASET2
TPK1
TNFRSF1B
HOXC5
HOXC6
PSMB6
RACK1
CSTF2T
TCTEX1D4
BTBD19
ZNF57
SLC6A9
FAM220A
CLBA1
PLCD1
SLC34A1
WDR55
MRPL48
TMEM42
HNRNPH1
MRPL27
EME1
WNT10A
PIGQ
NHLRC4
ZNF101
ATP13A1
ZNF346
KIR3DL3
QRICH1
TRIM5
TRIM22
PFDN5
MYG1
EEF1AKMT1
COQ3
H2BC11
H2AC11
H4C9
RTTN
UBOX5
FASTKD5
AGBL3
CCDC120
PAFAH2
LARP1
INTS2
PLXDC1
NOL8
CENPP
NLGN3
IQSEC1
C19orf25
EIF3F
ZBTB45
NECAP2
RPL5
BAG6
APOM
MED23
TOR1AIP2
TOR1AIP1
ZNF670
SRI
SARAF
AIFM1
RBM8A
MBLAC1
ZCCHC10
TP53BP1
TBX1
SLC27A5
CDYL
UGCG
TNFAIP8L1
PGAP2
AHCYL2
THAP7
RIOK1
CAGE1
TSACC
CCT3
SLC12A9
RAB40B
EPHB4
ZSCAN25
RBM28
BIN2
VWA7
SNRNP35
DUS3L
DENR
ZNF577
RNF187
TPR
ODR4
SMG7
CHCHD2
NDEL1
NHLH1
ZNF280A
TRIP4
ATP5MC2
GTPBP3
ANO8
MACC1
KAZN
FAM160B2
ULBP1
TIPARP
CDIPT
PLK3
HMGN4
FAM168A
SLC22A1
CAMK2A
RMND1
ARMT1
CORT
HDAC5
OR52N2
GAGE2B
METAP1D
TXN2
VARS1
PSPN
ALKBH7
RBIS
TOMM5
DHDDS
MFSD14C
PNPLA7
TTC4
TMED2
ERCC1
FOXK2
ADCY7
GDF11
RBSN
AASDH
WASHC2C
TMEM248
WDR76
MFAP1
GAPVD1
ANKRD27
ZNF627
COPS4
STAT6
LAT
PDE12
IREB2
PCYT1A
PIAS3
CRYM
EIF4ENIF1
MAP3K13
GSTA4
WDR36
ZNF165
PPARGC1B
KSR1
PSMC4
USP45
TSTD3
KXD1
SCAP
CNN2
TMEM259
ZC3HC1
GPN3
FAM216A
TENT2
MTFR1
ARNT
NDUFA10
SCN9A
OR6B2
PPP1R12C
MRPL40
HIRA
ZNF335
RPA2
RGL2
ADARB1
ZNF74
NFKBIL1
ATP6V1G2
TLE2
DDX39B
PTK2B
TRIM35
OGG1
ZDHHC7
GFI1B
TSC1
UFC1
MID1
TOMM40
HSF5
VILL
TARDBP
USP21
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TFPT
PRPF31
HUS1
MATK
FAM234A
MRPL42
ELFN1
RMND5B
ZNF33A
UTP6
C22orf39
DTX4
TLCD2
DCAF10
TMEM101
SELP
ELP1
ABITRAM
BTNL10
KEAP1
ASIC4
APRT
SIKE1
TMEM128
SYT3
PITHD1
SAR1A
MRPL44
CFAP298-TCP10L
CFAP298
PPP2R5B
ACTR3C
NEK4
NUP210L
PYCR2
COA7
ZNF436
OXLD1
CCDC137
TTI2
CYREN
MARCHF7
STX1A
ADGRL1
SLC39A8
KRTAP10-10
NUDT13
LOC730098
CCL27
ANXA2
NUDT9
PRKAR1A
ANTXR2
ARRB2
SKIV2L
NELFE
MARCHF8
USP16
ZCWPW1
MEPCE
RWDD2B
ZNF561
RTN4
CLPB
CCDC124
ALDH3B1
RAD50
USF1
DIS3L
MADD
TET1
STK40
C1orf74
FCMR
FBXL13
ARMC10
POM121
GM2A
SYT12
HTR5A
LCN8
CADM2
IRF2BP2
AQP10
ROM1
EML3
ERMAP
ATP8B2
TRADD
FBXL8
TRIM16L
PITPNC1
IGF2BP3
PDZD8
OCEL1
SVBP
ANKRD33
HSF4
CFB
TLR2
FAM133B
MAN2A1
PPP1R8
MARCHF9
CDK4
PEX14
DFFA
VPS39
GPD1L
SUGCT
MPLKIP
ASF1A
PRMT3
KDM5C
COMMD1
CCT4
ING5
AKT2
NAF1
UBE2I
BMPR1A
C17orf58
NOP16
HIGD2A
MTBP
MRPL13
MED18
SIRT4
CAMK2G
RPL7L1
SGCA
PRPF40A
ARL6IP6
MTMR14
OR10A3
PDZK1IP1
GPNMB
SPAAR
TSFM
PSMA1
CGGBP1
C3orf38
NVL
SAMD1
ARID5A
LIN54
RIOK2
ZDHHC12
SIGLECL1
GP6
TARS2
PFKM
SENP1
MEGF8
PEAK1
HMG20A
ADPRHL1
TTC31
CCDC142
ZNF649
MCTS1
RAB11B
PATL1
PRTN3
MTF2
SLC29A2
PRRC2B
GPR137
SF3B5
DDX42
CCDC47
SLC13A3
PACSIN1
SNX9
DNAJA3
TP53RK
SLC2A12
DCAF4L2
PPIP5K2
CCDC97
LCK
RIC8B
FAM167B
PSMG2
CEP76
TNFSF9
DEK
HEXIM1
ATXN7L2
CSDE1
RSPH3
CENPN
ZFP14
NFX1
CSRNP1
FZR1
MELTF
C10orf71
BTN2A2
VTA1
NMBR
SECISBP2L
GFM1
DYNC1I2
RALGDS
WDR62
THAP8
CITED2
LSM8
ZNF746
MAD2L1
PSMD4
HFE
B4GALT7
MUC1
WRN
ECE1
OTUD3
MMUT
CENPQ
PURG
CRCP
MVK
CD300A
BAAT
SKP2
LMBRD2
SLC25A51
AARS2
RAB18
MGAT5
PLD3
UPK3BL1
EXOG
SPRING1
RNFT2
PHYH
FKBPL
ATF6B
HTR3E
PYCR3
GPSM2
SEM1
ZBTB17
VKORC1
LCN15
ST3GAL2
NPRL3
RBMX
ZNF324B
SF3A3
CLUL1
AQR
CAB39L
AUNIP
C1QTNF12
UCP3
TMEM87A
GANC
TOMM6
MOB3A
IZUMO4
NQO2
SLC35C2
MRPL19
CCDC174