ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1925740 | iPSC derived neural cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◣ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

FRG2C
FRG2
CCDC200
CBX1
KLF4
BCAR3
DUX4
SMCO1
POU5F1
KLF14
JMJD1C
REEP3
SNX16
SRSF5
MUC3A
TMEM216
DBNDD2
LUC7L2
FMC1-LUC7L2
FMC1
SOX2
ATP9B
ELOVL2
COL23A1
C3orf14
C1GALT1C1L
FAM184A
POU5F1B
RAB37
FANK1
CCDC130
MAD1L1
EXTL2
ATF7IP2
DHX40
VN1R4
MAIP1
RPL26L1
PLXDC2
FEM1C
TMEM43
CHCHD4
PDE4DIP
POTEH
KCNJ15
ITGB3BP
EFCAB7
CHMP6
UBE3A
ZFP30
RPS14
ATP1A1
MTF2
SIVA1
SPDYA
TMEM44
SCGB1C2
SCGB1C1
FAM227B
DTWD1
NBPF1
MTRNR2L1
TLR2
ANK1
RNF187
USP30
PEX3
ADAT2
RTTN
GK5
ENOSF1
DHRS7
PAQR9
HNRNPL
BRWD1
NUF2
PNPLA7
HMGB1
USPL1
TMX4
TTLL12
PDCD7
AVPR1A
SAMD4B
CD47
TRAF6
RAG1
COLEC11
TFPI
SOX30
C5orf52
SPATC1L
GTF2A1L
C2orf88
TRDMT1
SLC11A2
SDCBP
INPP5F
MRPL22
GEMIN5
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
HUS1
ZKSCAN2
SLC39A6
ELP2
ANKRD18B
TBC1D2
ANP32D
DCP1A
PTGES2
AGBL3
XKR6
POLR2J3
ANKRD54
EIF3L
NEMF
CBWD5
CBWD3
ZCCHC7
GMDS
CLGN
STX16
TMEM242
EIF2S2
GAGE2A
ADAMTS20
DUSP16
MIS18BP1
RPAP2
GLMN
KBTBD7
CNTLN
ANO5
CAT
LBR
FKBP9
SULT1B1
C19orf18
SLC44A1
HECTD1
OR8B3
GAGE2B
GAGE12I
GAGE7
GAGE5
GAGE4
IQGAP2
RAD54L2
EIF5A2
BTBD10
NEIL3
STX18
PRELID3B
MRPL40
HIRA
LRP6
NEK7
YTHDF3
PCDHB5
MTRNR2L8
SLC10A7
ZSWIM9
LIG1
ZNF562
NUP54
ARHGEF12
PLCL2
ZNF416
ZIK1
DNM3
TMEM41A
KAT6B
RIPPLY3
CTNNB1
CRH
C1orf53
PRPF40A
ARL6IP6
ILRUN
GLRB
YPEL3
FAM153B
PJA2
TASOR
C3orf80
KCTD3
NLGN4X
PGBD2
BTG1
ZNF584
GPR150
CNTRL
C5
RNF38
TMEM98
ARMCX1
NOTCH2
ZMYM5
KANSL1
TAS2R4
PPP2R2B
RIMS2
ZC3H12C
PCDH17
RFC1
YBEY
MCM3AP
PARP16
TMEM229A
ZNF572
DEK
ADAM22
MARCHF7
TULP4
RANBP2
PTPN12
USP35
KCTD21
DNAH6
RPS29
MED4
RUNDC1
PTGES3L-AARSD1
PTGES3L
ELF1
WBP4
RFK
CTSC
GRID2
NSFL1C
KIF2C
SH3BP5L
GDAP1
FH
DDX60L
CTXN2
MYEF2
POLE4
RPL11
LIMS1
ATL3
HSPA2
DPY19L4
MTERF4
PSMG1
PPP1R9A
KLHL7
HACD3
TNFRSF11B
COLEC10
ZNF623
MRPS31
EPS8
SNIP1
DNALI1
SNRPB
C18orf21
TRMT5
SLC38A6
TARS3
XKR4
KRBA1
CLTC
IQCF2
RNF130
OTOP1
POTEB3
POTEB
CDYL
SELENOT
HDAC1
SAMD13
SNRNP48
ARHGAP39
HYAL1
ZNF518A
MS4A1
KBTBD3
AASDHPPT
UTS2B
CCDC50
IQUB
MFSD14A
LRRC8C
DEPDC1
OPRK1
LGR5
MRPL48
ACBD6
SMAD5
MRPS5
MTHFS
SVOPL
FIGNL1
CARS2
DSTYK
RMDN2
CCNI
TMA16
FBXO34
BOLA1
TBC1D3F
TBC1D3L
TBC1D3H
TBC1D3G
TBC1D3K
TBC1D3I
TBC1D3E
TBC1D3D
TBC1D3C
TBC1D3
TBC1D3J
KCNN2
CTAG1B
CTAG1A
MRPL21
IGHMBP2
SMIM13
HLCS
NAPG
WNT2B
ARNT
KAAG1
DCDC2
C15orf61
PCDHGB7
CERS6
PCDHGA11
ACYP2
RUVBL1
DLAT
SLC25A53
EEFSEC
SLC25A18
PEX2
ZSWIM5
COG6
HECW2
SF3A3
CLK4
C12orf73
EPM2A
PRKD3
WDR74
RNF6
UBE4B
ZNF791
ZNF490
CRTAP
RAD23B
ADIPOR1
P2RY1
SORCS1
GADD45A
EIF3D
MDM4
MRAP2
ACAT1
SSH2
LRATD2
DKK1
CLOCK
AKR1E2
TTC32
ZNF280D
ZNF286A
CPD
STBD1
PPP2CA
RRAS2
CPPED1
FAM98B
RSRC1
SHOX2
MRPS30
TTLL7
TATDN3
NSL1
PIK3R1
ALKBH3
MRPL42
SEC31A
DR1
LRTM2
TYW1B
THAP9
EIF4G2
VPS37A
CNOT7
APOLD1
PCBP3
ATG10
STK17A
PCDHA6
PCDHA5
PPP5D1
CALM3
PRDX3
NFE2L2
BCKDHB
EEF1AKMT2
SLC35B4
RPS6
ALG1
PARP4
ENAH
E2F7
COG2
VAMP4
TIGD6
HMGXB3
MBD4
IFT122
SH3RF2
STX17
ANGEL2
P4HA1
DTD2
SLC39A8
FHAD1
TMOD3
PCDHA4
HSPA1B
MED23
GTF2H2
PDCD6IP
RNF125
WDFY1
THOC3
RPL6
MTLN
PTPN11
ZC3H15
ARFGEF1
L3HYPDH
JKAMP
JRKL
CCDC82
HEATR5B
GPATCH11
PIK3CA
TMEM191B
SVIP
HPS3
NSMAF
ZDBF2
RIOX1
PCDHGC3
SGIP1
NARF
CYBC1
REXO4
ADAMTS13
ZNF829
ZNF568
ZNF25
NDUFA6
ARL4A
COPS8
BTG3
SH3GLB1
CCDC71L
HACE1
AKNA
BTF3
TRIM27
GNAI1
SEC22B
KANSL3
FER1L5
ZSCAN25
HYOU1
NOL12
G3BP2
SUCLG2
CDC42SE2
SMARCAL1
GPR155
INTS12
GSTCD
DRG2
ZNF391
MTIF2
GFM2
SRSF7
CALM2
PXK
TOMM20L
HDAC9
SPATA7
GPD2
LIN7C
C4orf36
HSF2
LRRC7
YTHDC2
UBE2D3
CLN5
RNASEH2C
SLC36A1
DEPTOR
BSDC1
METTL25
CCDC59
PFKM
SENP1
FZD1
UBQLN1
SEC61A2
NAP1L1
PPP1R12A
SMIM10L1
PRH1-TAS2R14
PRH1
MPP5
STXBP5L
CHST14
GPR88
ZNF324B
COMMD2
RBBP9
GTF3C3
AUH
UBE2Q1
COX18
PHF3
METTL16
HERC4
TBC1D31
ZNF544
SRSF12
SETD5
NID2
GINS1
TLNRD1
TMX2
MED19
STAG3
GPC2
GGA1
RBM15B
RPN2
MROH8
LRRC75A
AKAP9
NT5E
SLC46A3
WDR72
SLC35A3
RPL5
NMRAL1
HMOX2
OPRL1
LKAAEAR1
MRPL17
CRNKL1
CFAP61
PCM1
ZSCAN32
ZNF174
NEK9
ZNF518B
DNAH14
ORC2
ZNF485
SYT1
ZNF354C
FBXL5
SLAIN2
DPF2
ACP6
TRERF1
P3H1
DIPK2A
HTR5A
MTMR9
TMEM202
MPHOSPH10
MCEE
SMAP1
SPRYD7
SS18
PTPDC1
WDR12
CARF
SDR42E1
MRPL44
ATR
KLHL20
MTBP
MRPL13
MTR
CBWD6
CADM2
MAPK1IP1L
SMIM12
ZNF30
GOT2
EXOC2
TTC37
ARSK
TYW3
CRYZ
ZNF24
CCDC138
HECTD2
HADH
ISCA1
CFAP206
CHMP2B
CHSY3
POLR3D
NELFCD
SLC25A27
CYP39A1
FNBP1L
ADGRG6
TACSTD2
FN1
CRHBP
ZNF32
DUS1L
METTL9
ADAR
DCP1B
ZC3H6
FAM172A
KLHL41
MAGEF1
PCNA
KBTBD6
DNAH7
LUC7L3
FANCA
GRIA4
PUS3
DDX25
ZNF341
CD14
TGFBR2
PPP1R8
C6orf89
ANO10
RHEX
PKD2L2
PPIL1
HERC3
PYURF
PIGY
SRPRB
ABHD5
BTBD1
NCAM1
CENPV
PSMA1
LRRD1
CEP78
ATP6V1C1
NANOGP8
NTSR2
ZNF26
MSRB2
PDE3B
LGALSL
TJP2
PCDHA12
PCDHB4
PCDHA13
ANKRD36
ZNF329
MRPL58
GNAL
FAN1
THUMPD1
MTHFD2
IMPACT
RHBDD1
MYBL1
GPR37
CTHRC1
SMC3
ATP7B
ALG11
UGT8
RNF32
TMEM185B
NRG3
KMT2A
MRPL39
SLC25A28
SLC25A32
DCAF13
BTRC
ANTXR2
ZFYVE9
SYS1
GMFB
EFCAB13
NUP58
FZD7
NASP
B3GALNT1
TRIL
PRSS38
B4GALT7
MEMO1
RPS3A
ANKRD36C
OR1E3
MANF
CEP63
ANAPC13
MRGPRX3
BBS5
RDH14
GINM1
GTF2E2
GCH1
UBE2V2
STRN3
AP4S1
ZFP2
HSPA1L
HSPA1A
PCDHA7
EIF2D
AGK
ZNF512B
INO80D
NOC3L
AMZ2
CCDC90B
CBR3
FAM185A
CCDC112
PAG1
MINDY2
SLC38A1
PCYOX1L
EIF3A
ERV3-1-ZNF117
ERV3-1
SUSD5
KLHL14
ZNF454
DDX1
ABCC10
WDR47
RTP3
ZFP91
LPXN
CDC25B
AGL
ICE2
CENPB
ALMS1
WASHC4
QKI
BCL2
SPEF1
ADRB1
PCDHB14
GAGE12E
GAGE12D
GAGE12C
GAGE12G
GAGE12F
GAGE12H
CAVIN3
ARPP21
OR10AC1
PDE11A
MAN2C1
ZNF670
TRAM2
TATDN1
NDUFB9
ACTRT3
DIDO1
GID8
MYNN
GAPVD1
CCPG1
C15orf65
CADM1
CTNND2
TACR3
ZNF443
RNF138
TAB2
ST8SIA4
TSPAN12
PRDX6
ZNF229
PCDHA3
SEMA6D
PCDHA2
HORMAD2
FRA10AC1
BMS1
MOB4
CHD1L
PRKAB2
C10orf88
POLR1F
KCNH1
SRSF11
TTC14
UBOX5
FASTKD5
SMIM8
ZC3H14
TFAM
NLE1
TMEM106B
POC1B-GALNT4
POC1B
GALNT4
PDGFD
SLC35E3
PSMD14
EPHA3
ALG9
ADK
ZNF354B
ETNK1
STARD6
C18orf54
CC2D2B
GPR180
LOC643802
ATP5F1E
CBY3
PXYLP1
RICTOR
RPAP3
ZNF780A
RRS1
ADHFE1
MTMR2
ITM2B
UPF2
PTDSS1
MTERF3
CXCL6
PCDHB13
PRR5L
CLVS2
PCDHB12
HMGCLL1
QRFPR
TRPC3
OR8S1
SNX32
TRPA1
DEGS2
SLC24A1
OAZ3
TTI2
ABCA3
ELF2
TBC1D5
PPP2R5A
ACSL1
EGLN1
TRIM44
LCMT2
ADAL
CTBS
C2orf69
LY75-CD302
LY75
PGAP4
FAM114A1
SEC31B
WDR11
HSPE1-MOB4
HSPE1
HSPD1
SLC45A4
FBXO22
RAD52
CFAP20
AASDH
CNIH1
DYNLRB2
TCF25
YWHAE
NXPE3
PKM
GHITM
HNRNPF
PEX7
FAM161B
COQ6
MAD2L1
JAK2
MAP3K1
FZD6
ARFGAP3
KDR
EDNRB
GUCY1A2
ERICH6
SYT16
CELSR1
SELENOH
PRIM2
SMG7
C5orf34
NFYC
CYP2R1
BORCS5
CEBPB
NCEH1
INO80
FECH
SNCA
PCDHGB1
TTC12
PCDHGA3
CFAP91
FAM149A
FBLL1
SERP2
DCAF10
CBR1
FAM160B1
CYP51A1
APRT
ELP1
ABITRAM
NUDT4B
NUDT4
ZNF621
GABPB1
NKIRAS1
TMEM30B
SEC24B
RALGAPA1
KIFBP
PLD1
SCYL2
DEPDC4
NR1D2
LHFPL4
GRB14
APOA1
KMT2D
ZBTB6
MAP3K7CL
CCT8
TMEM267
HSD17B12
ZNF622
HSPA5
RB1
ANKRD18A
ZNF830
CCT6B
TESMIN
EPSTI1
MDFIC
NTAN1
PCDHB3
PCDHB2
MOV10
PCDHGA12
PLPPR5
ST6GAL2
TRIP4
SUPT7L
SLC4A1AP
TBC1D13
GOLGA6L7
RMDN1
SLC26A4
FZD9
PHF10
FANCF
CPNE3
PHLPP1
SPAG6
DIRAS2
PODXL2
LIFR
RHOB
ERBB4
RPL37
KLRD1
TMBIM4
NDFIP1
CGGBP1
RINT1
POLR3G
MBLAC2
PPP1R12B
FER