ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX17826861 | 293
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◣ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

COL23A1
MTRNR2L2
MSH3
DHFR
MTRNR2L1
FRG2C
MTRNR2L8
DUX4
MUC3A
FRG2
WDR74
MTRNR2L9
SNX16
CCDC200
EPN1
ITGB3BP
EFCAB7
DCP1A
TRIM48
PEX3
ADAT2
NME1
GBA
TEX19
SNAP47
JMJD4
CYP4F11
NDUFS7
TMEM101
ZSCAN22
TMEM242
DRG2
POLR2J3
COPS7B
PDE6D
WDR11
GOLGA3
BRWD1
EIF2D
MRPS31
SMARCD2
TOP3B
INTS12
GSTCD
TXNIP
STX16
UTP3
NR1H3
ACP2
KMT2A
SNRPD3
GUCD1
PAXBP1
PRPSAP1
RBBP5
CASC3
METTL9
CCDC97
NR1H2
HEMK1
C3orf18
DSTYK
TOR1AIP2
TOR1AIP1
RNF187
MED23
GOSR2
SMG8
STAT3
FXN
MRPL39
INO80C
ZNF76
SLC39A3
RBM28
RRP15
CCNG2
LINGO1
RPS7
PSMF1
SPATC1L
HMGB1
USPL1
TATDN3
NSL1
MRPL48
GFI1B
TSC1
ARHGEF1
TSNAX
ZNF335
SELENOW
UBB
SF3A3
MTERF4
MPHOSPH10
MCEE
TEFM
NCBP3
WASHC1
NUF2
CLTC
GTF2H2
TVP23B
TMA16
THEM4
SSBP1
ZNF561
SNRPD1
UBE3B
KCTD10
PRPF18
HEXIM1
UBC
NUDCD3
NKAP
MRPL44
SLC33A1
DUS2
DDX28
PTPN21
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TRIP4
DRAP1
C11orf68
TAF3
NOP16
HIGD2A
LMAN2
STX18
ZNF408
ARHGAP1
ATXN7L2
NVL
SMG7
RTTN
TTC4
ALKBH3
NUP54
ARID2
VPS25
IPO4
MRPL40
HIRA
NSFL1C
SNX17
EIF2B4
ZBTB45
FRA10AC1
STMN3
RTEL1
PSMB7
ZMPSTE24
TACO1
RBL1
TAOK3
ZNF839
ZBTB17
SUDS3
GTF3C5
C18orf21
TIMM22
TIGD1
EIF4E2
PPIP5K2
FRG1
ATL3
GIT2
ANKRD13A
RNF121
LOC100133315
RFXANK
BORCS8-MEF2B
BORCS8
PIGL
NCOR1
KAT6A
TTC26
ZCCHC4
NDUFS3
KBTBD4
KCTD5
C12orf73
FAM187A
EFTUD2
CCDC103
MTF2
EIF1AD
BANF1
DHX40
UQCC1
PREPL
CAMKMT
FAM207A
DDX46
YARS1
S100PBP
VPS33A
DMAP1
DNAJB12
TRDMT1
BMS1
HUS1
HNRNPA1L2
VPS45
PAFAH2
REXO4
ADAMTS13
MRPS23
MAN2C1
TBC1D13
DPY19L4
EIF3F
MCOLN1
PPP6R1
PCDH9
NDUFB3
FAM126B
KDM1A
TRUB2
COQ4
TEX46
VPS13B
MRPL16
CGGBP1
C3orf38
UBQLN1
BANP
SEC13
PRRG2
NOSIP
TOMM22
MRPL58
CDK5RAP1
FBXO22
MTIF2
SLC39A6
ELP2
HINT3
DCAF10
ATR
EIF2B3
SF3A1
CCDC157
BICD2
HSPE1-MOB4
HSPE1
HSPD1
STMP1
EDC4
DPP9
CCNC
COX16
ZBTB40
AGK
ZSCAN12
TARS2
LTN1
DUS1L
GTF2H2C_2
GTF2H2C
LRRC59
PPP5D1
CALM3
KCNJ15
KRBA1
SMCO1
FAM209A
TATDN2
YPEL3
MAMDC2
AADACL4
UBE2F
BSDC1
MBOAT4
TMEM89
IRAK2
ZNF562
EXTL2
DUSP6
DEGS2
FAM153B
DBNDD2
GORASP2
CTAG1B
CTAG1A
FAM184A
PDE11A
SNCG
MMRN2
SARS2
MRPS12
ST20-MTHFS
FAM227B
DTWD1
RABGAP1
TBX6
CBX1
ZNF572
TMEM229B
TXNRD2
FEM1C
APOA1
COL18A1
APOBEC3B
BCAR3
BCR
ARHGAP39
ZNF324B
LEP
ZNF761
AURKAIP1
SUMO3
OR4K17
MON2
LUC7L2
FMC1-LUC7L2
FMC1
TLR2
PRRT1B
SAMD4B
C2orf88
PRSS38
GSTM5
PUM1
GPRC5C
ACYP2
SCCPDH
ANP32D
RFC1
FAAH
ST6GALNAC6
RBPJ
ACAA2
BAAT
SDR42E1
SLC1A7
IGFALS
CEP85
TTLL12
ADCY10
RPS29
CCDC130
TMEM41A
RAB37
SEM1
IL21R
ZNF117
CEP72
SLC27A5
YWHAQ
ZNF623
SATB1
CALCB
RPL27
TMEM70
ELOC
PPIG
GPD1L
IL36A
RBM33
IFT88
JMJD1C
PLEC
CYP17A1
ZNFX1
MAPRE2
MROH7
GDPGP1
CIB1
POLE4
SULT1C3
ZNF577
NOS3
RABGAP1L
TTC32
NPAS4
CALD1
SKP2
LMBRD2
ACOX3
C19orf18
HERPUD2
NARF
ZNF317
TBC1D19
ZNF426
ZFP30
CLK4
TMEM43
CHCHD4
SELENOH
CFHR4
PNPLA7
SLC24A1
TRMT44
APOL4
ENG
PRELID3B
TMEM14C
ATP1A1
RPL37
ZSCAN31
SCGB1C2
SCGB1C1
COMMD2
GALNT1
ADI1
DNAJC25-GNG10
DNAJC25
PSEN1
POLR3B
ZNF792
TMEM62
RBBP9
RPS14
LIPA
NME4
GSTA4
METTL25
CCDC59
ALG10B
TFPT
PRPF31
YTHDC2
CYBC1
RERE
KDM3A
CLDN16
PDCD7
SLC44A1
SLC25A51
CAT
MAD1L1
TDP2
ACOT13
GTF3C3
ZNF134
LMLN2
SFT2D3
SLC41A3
REEP3
TIGD2
PIK3R1
ANKRD54
RAD54L2
GTF2H4
INTS5
VTA1
NMBR
TMEM68
TGS1
EIF3L
EPS8
ATF7IP2
YY1AP1
DAP3
AUH
THAP11
NUTF2
LSG1
ZNF341
SUPT7L
SLC4A1AP
CATIP
YJU2
CENPT
PARP15
ACTL8
ZNF32
GOLM2
FBXO31
HTR5A
BAIAP2
RPL11
ITGA4
TMEM44
CAMK1D
PDE4DIP
SNIP1
DNALI1
WDR36
SEC22B
GCNT3
GLO1
FGD3
MSRA
ZNF841
C3orf14
GINS1
ZNF829
ZNF568
PPP1R11
MMACHC
LCN8
RILP
NEMF
SCAND1
PRIM2
ESR2
USP30
THOC5
ORC4
MBD5
NBN
SLC2A7
REN
DEK
EFCAB10
MRPL21
IGHMBP2
SCMH1
CCSER2
HSD17B6
SGCE
PEG10
ZNF391
TMEM222
ILF2
LARP1
FGFBP3
ATP5MC2
KANSL3
FER1L5
POLR3E
SLC29A2
SUPT6H
SDF2
ZNF540
SAR1B
MOB4
C1orf167
MRPS18C
HELQ
METTL8
DCAF17
FAM133B
MRPL1
ZNF571
LSS
WDR43
AKAP10
SAMD4A
RMND1
ARMT1
KLHL20
BNIP1
SPAAR
GALK2
ZNF226
C17orf75
NRBP2
IST1
LGR5
HYAL1
SCNM1
LYSMD1
CLTB
GTPBP3
CD47
ANO8
MMP7
KIAA1549
GFM2
CPPED1
ATP9B
NFE2L3
OAZ3
TUT1
GABPB2
COLEC11
DUSP16
CANT1
ZNF609
HACL1
BTD
WDR55
C16orf54
COPS4
DDX18
CTNNB1
SMIM31
FASTKD1
TMEM79
SMG5
CHD1L
GASK1A
EXO5
SNRPB
ANXA2
MAIP1
RUVBL1
C1GALT1C1L
POLG
GRPEL2
NCOA7
OTUD7A
SERHL2
ATF7IP
TTI2
RPS20
RMDN2
RAB30
ZNF566
MLEC
CBWD5
TPR
ODR4
ZSCAN25
STAU1
LZTR1
OPA1
FBXL12
CFAP298-TCP10L
CFAP298
NOTCH2
CASP4
TMEM114
MRPL30
MITD1
RTCA
ARID1A
TPM1
DCLRE1B
AP4B1
C8orf37
PIN4
DGKZ
AFAP1L1
ADNP
GPAM
CD14
CBWD3
MNAT1
FAM228B
SLC45A4
GOLGA5
B4GALT7
KLRD1
ADRM1
SLTM
KLHDC9
CCAR2
C8orf58
H4C8
ANK3
PCP4L1
TMBIM4
BCL9
TSGA10
ADPRS
SLC39A13
TLNRD1
HNRNPD
EPRS1
CLDN4
EIF3E
RNASET2
TPK1
SF3B6
CCDC150
COX7A2
GMPS
TMX2
MED19
PSRC1
TEKT2
ZNF398
PSMD6
CDYL
MTBP
MRPL13
CCNI
SUGCT
MPLKIP
SDHAF3
BRF2
TSFM
ADAR
SLC38A9
SLC35A3
PSMD3
SRRM3
LOC102724265
IAH1
MATK
CCNT1
INPP5F
POLR1H
ING2
COPS2
MED18
PHIP
TIPARP
REM1
DEFB124
PIGW
MYO19
PARP2
UBLCP1
TRIM38
FABP6
NAA20
CENPV
SMU1
RANBP1
SLC35E2A
CRKL
CDC73
ZNF772
TGFBR2
TTLL1
MRPL34
MRPL3
LRRC37A3
CLUAP1
SNRPB2
MTR
PLEKHM3
PRDX3
KRTAP10-8
TRMT2A
ZNF292
NFAT5
SRSF7
SPSB1
NECAP2
LONRF2
N4BP2L2
VIRMA
WWOX
SACM1L
CCR6
FAM98B
MTOR
CNOT3
TRMT5
SLC38A6
SESN1
LNPEP
AARS2
ZNF165
CBWD6
ZNF280D
RBM45
RAB18
RPL26L1
TTC13
PRKAB2
ARV1
SEC23B
TTC5
CDK19
AMD1
HAX1
ZSCAN30
SNRPE
ZNF438
TEX50
PPIAL4F
PPIAL4E
PPIAL4D
WWTR1
PIP4P2
MAGOH
R3HCC1
TMED1
PDCD6IP
LRIG2
CASP10
LRP6
FBXO38
COA6
RNF125
RPS15
MYCBP2
FOXN1
C2orf15
ACSM2B
PIH1D2
NKAPD1
STOML2
CADM2
PUS10
PRRC1
PEX13
MRPS14
U2SURP
ZNF554
ALG10
PRKAG2
WBP1
INO80B
NBPF1
TEX9
RFX7
H4C12
LSM5
TIAM1
HIP1
ANKRD40
C10orf88
CALCRL
CEP120
DHRS2
AAR2
KMT2D
RPL5
STX6
MSL2
LPIN1
CEP57L1
DLAT
SMIM13
TBCK
AIMP1
SUGT1
RCHY1
GSPT1
AVL9
CEP85L
CCDC88A
DDX1
POM121L2
NOXA1
ARRDC2
GABPA
ATP5PF
HLA-E
TARS3
CASS4
CLUL1
NMNAT1
LZIC
RNF6
TMEM42
PPP2R5B
NDFIP1
FAM234A
MAPK1IP1L
IQSEC3
KRR1
DHX16
MFF
ZZZ3
PRMT5
MEMO1
GCNT1
WDFY1
ITGAL
ATG101
PFKM
SRP9
H4C11
MRPS33
PCBP2
SLC35E2B
ZNF425
YTHDF2
CREM
ABHD11
EPB41
HEATR4
ABCC10
ZNF512B
PTPN4
ZNF385A
SEL1L
ZNF546
SEC14L1
RESF1
TRAM1
TMEM65
GNB2
CDIPT
CNN2
RPS19
GLIPR1L2
SGMS2
PDRG1
DHTKD1
SOD2
NUP107
ELAVL3
SLC35G5
MRPL19
C2CD5
MED4
MTMR6
MAP1LC3B2
RPS3A
ASF1A
ZNF439
PPP1R3B
SDCCAG8
CEP170
TMEM259
STK19
DXO
KNL1
EEA1
TBL1X
ZNF3
DNAJC11
CACNG1
RABGGTA
KIF2C
MUC1
OR2AP1
SETD1A
ZNF383
LTA4H
SLC35B1
CUL2
YBEY
MCM3AP
ZNF846
SLC9A1
CNOT11
GRAMD4
MIS18BP1
PES1
MMEL1
CPLX2
ARMH3
POLR2E
XKR7
ASNS
COG2
CCDC174
ERCC6L2
ATG4C
ZNF296
GEMIN7
RTN4
INTS4
TPM3
PAK1IP1
C6orf52
WDR70
NUDT9
RPS26
RCAN1
CDK12
CRBN
POLR3GL
IFI44
ANKRD34A
SHF
INKA2
DDX20
RPL38
C11orf49
FLT3LG
RALBP1
PHF21A
DCT
SEC14L5
METAP1
IL36RN
IL36B
GARS1
NSUN4
LRRC61
CCDC115
TFPI
SET
ATAD2
TLR1
PRAME
ARL17B
CYB561D1
RUNX2
RAB5C
CELF2
DISP1
ATG5
P3H4
FKBP10
VWA8
ATP5MC3
GTF2A1L
ACBD6
NT5DC1
RIF1
CBR1
SMIM12
ASPSCR1
FAM160B1
RAP2C
FAM13A
NNT
ABLIM1
CYB5A
FAIM
SENP1
FOXJ3
MRPS15