ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1799525 | CD4+ T cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◣ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

GBA
THEM4
CAMK1D
DUSP6
GDPGP1
CIB1
SMCO1
PAXBP1
BCL9
ANXA2
KLHDC9
GOLM2
ITGA4
STX6
SFT2D3
ITGAL
PUM1
SPATA13
SNX16
LIME1
FAM209A
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
THAP11
NUTF2
CENPT
FAIM
TBL3
RNF151
YPEL3
SF3A3
FNBP1
FRG1
PPIAL4F
PPIAL4E
PPIAL4D
SSBP1
FRG2C
NUF2
ZNF792
SORL1
ZNF540
ZNF571
VTA1
NMBR
TTLL12
CD69
DDX18
ZNF827
MRPL44
ZBTB20
GPR68
SYTL2
SKP2
LMBRD2
PSTPIP1
APBB1
ZNF226
RUNX2
ASB2
TNRC6B
DMAP1
NDUFS7
DCP1A
MYCBP2
STAG3
GPC2
HMGB1
USPL1
EXO5
TFPT
PRPF31
GMPS
FRG2
TMEM255A
PPIP5K2
TDP2
ACOT13
SCNM1
LYSMD1
GLS
USP25
HNRNPD
ARHGAP15
NME1
AP2B1
ARHGAP9
MARS1
STX16
NAP1L3
FAM133A
FAM227B
DTWD1
NSUN6
ALG10B
COX16
GTF2H2
ADPRS
TEKT2
NTRK1
SH2D2A
CLUAP1
GTF2H2C_2
GTF2H2C
MED18
DUX4
APOA1
SATB1
CHMP5
BAG1
CCNT1
RPS7
IPO4
TMEM39A
RPL37
DCAF10
GATM
SPATA5L1
POLR3B
SNRPB
PSD4
KMT2A
SEC23B
SLC29A2
NOTCH2
IRAK2
PCYOX1
MED23
ORC4
MBD5
GTPBP10
LY9
MDGA1
FRA10AC1
MBOAT4
CBWD5
NDST2
BRWD3
ELOVL5
LEPROTL1
MUC3A
CEP68
SETD1A
RAB18
PHB2
RPL27
NAT10
EIF3E
TRAM1
KCNJ15
NDUFB3
FAM126B
VPS29
RAD9B
LIPA
NLRP1
MTF2
INTS12
GSTCD
ATP5MPL
ERCC5
ZNF791
ZNF490
METTL25
CCDC59
PEX3
ADAT2
PRRG2
NOSIP
TES
TOR1AIP2
TOR1AIP1
LCK
ADAP1
NUP133
WWOX
PGBD4
EMC7
LSM8
P3H4
FKBP10
ADORA2A
ARID1B
SURF6
CTNNB1
PWP1
SMAD7
RPL26L1
CBR4
FLI1
LSP1
SIRT6
ANKRD24
STX18
C16orf54
GALK2
COPS2
CNIH1
RBBP5
ZNF829
ZNF568
FGFBP3
TATDN3
NSL1
ING4
RPS11
ZC3H12D
CBWD3
CBWD6
PGK1
SNX17
EIF2B4
NR4A3
PPIAL4H
PPIAL4G
SCP2
USP45
GABPA
ATP5PF
RAB5C
PTK2
EIF2D
MRPS23
MTMR9
SF3B1
GOSR1
DNAJC25-GNG10
DNAJC25
DGUOK
ING2
GTF2H3
EIF2B1
GPAM
TUT1
GFM2
TPR
ODR4
HTT
CCAR2
C8orf58
SCAND1
CPEB4
TSGA10
C2orf15
ALG10
ZC3H15
ZNF408
ARHGAP1
PRRC2B
PRKCE
RPL22
TRMT6
MCM8
LDB1
RPL29
ANXA2R
NPAS4
ABLIM1
KLHL20
TMED2
ECSCR
SAMD4B
EPS8
ZZZ3
GNAI3
STOML2
PSRC1
WDR36
VPS11
RPS16
SNX5
MGME1
WDFY1
PFAS
CTC1
TPP2
CYP20A1
UBE2O
AANAT
ZNF555
SDHAF3
POLR3A
RPS24
BCL3
MRPL53
GAA
SMG6
RSL24D1
UBA3
ARL6IP5
MRPL30
MITD1
DDX46
NUP214
SELPLG
SNRPD1
SS18L2
UBE4A
RHOG
MRPS18C
HELQ
WDR55
TTC32
MFSD8
ABHD18
MED4
STARD6
C18orf54
WBP1
INO80B
ATG5
POLG2
MRPS31
MRPS16
TMEM222
FAM228B
SF3B6
FBXW7
NOC4L
DDX51
ATR
RMDN1
BTRC
TLR6
MFF
COL23A1
TAF12
EXOSC9
IL2RB
RALBP1
RPS15
EFHB
RAB5A
AOPEP
SLC33A1
TBC1D10A
DGKA
PYM1
SPRYD4
BUD13
PPP6C
ARAP1
MAP3K7CL
CCT8
CEP85L
C1orf74
MTRNR2L1
HAX1
ZNF44
KDM7A
PPP4R3B
TADA1
EIF3F
SNAP47
JMJD4
ARHGAP45
IFIT3
LNPEP
RANBP3
SLC25A51
XPC
LSM3
USP4
TMEM230
RRM1
KANSL1
MTIF3
ZMPSTE24
THOC3
RAB43
PSMF1
PPME1
C2CD3
BIRC3
TMEM87A
GANC
C10orf88
LCP1
FKBP1A
CDK11B
CDK11A
ZNF846
TRNAU1AP
ABCD2
ZFPL1
TMEM262
CDCA5
CAMK2D
ERMARD
RETSAT
ELMOD3
CCDC200
EXOC5
AP5M1
PRKAG1
NDUFA12
WDR76
MFAP1
ARF6
KRTAP16-1
KIAA1191
ARL10
SELENON
RGL2
EXOSC6
HILPDA
TIMM23
PUM3
ELP3
CHMP1B
RAD54L2
TMEM68
TGS1
MRPL21
IGHMBP2
PSMD3
KCTD5
WIPF1
ACAA2
TMEM242
EIF1AD
BANF1
ZNF3
PSMB7
CD2BP2
PXN
SUGT1
MAP1LC3B2
UBA52
MLEC
SECISBP2L
TESPA1
CAP1
ZNF501
FITM2
CRADD
R3HDM4
RPS20
NDUFB6
C17orf100
MED31
UBE2F
SAP30
RABGAP1L
PRPF18
BRIX1
HBS1L
IL16
ZC3H3
ADPGK
PA2G4
GPR65
WDR74
ARID1A
RPS12
BCL9L
TRIP4
HERPUD2
ACTR6
RESF1
NR2C1
SNRPC
TBC1D19
FYN
NOB1
THUMPD3
SLC44A1
PTPN4
DHPS
FAM167B
ZNF567
MGAT1
ICAM2
UTP23
MTPN
LUZP6
DPYD
LRRC46
YIPF5
KCTD16
EDEM1
ZNF821
CANT1
COPS4
RPS13
PHKB
ITFG1
ARHGDIB
SPDL1
ACOX3
TRMT44
NFAT5
NDUFAB1
WDR43
SEC31A
WASHC2C
CDK5RAP1
NUP107
UFL1
RCC1
PKN2
RMND1
ARMT1
WDR70
TMEM116
ERP29
UNC50
COA5
S100P
LAX1
UBL7
RIC8A
BET1L
RPS29
VWA8
OXA1L
RGS1
PPP1R11
ST20-MTHFS
WDR4
GSPT1
SPTLC1
ZNF562
FAM207A
INTS4
EGR2
ATXN7L3B
ZNF318
RGS14
PAFAH2
MAD1L1
METTL18
C1orf112
RER1
MORN1
XRCC2
PBXIP1
TEX9
RFX7
NARS1
OCIAD1
PPP1R18
CELF2
UTP25
PIH1D1
ALDH16A1
ENO1
STRADA
DFFB
CEP104
SLC7A6OS
PRMT7
TTI2
ITPRIP
PARP6
SKIV2L
NELFE
FADD
NSUN4
BACH1
ASXL2
SGO1
BRF2
RPL38
HIF1AN
ZNF668
ZNF646
ADH5
ARPC2
BCDIN3D
EPRS1
HNRNPA1L2
ZBTB2
ADAR
GRWD1
RTF2
STK17B
PHF21A
PDE8A
RSPH14
RAB36
RANBP2
UBR4
NDUFS2
ADAMTS4
ARHGEF6
EVI2A
BACH2
TIMM9
KIAA0586
LSM5
AVL9
THNSL2
ACTR3
AGGF1
SMIM26
DRG2
ATP1B3
BBS2
RUVBL1
PSMD6
CWC25
PRKRIP1
PARP8
TMEM186
PMM2
GPR171
RAPGEF6
RALGAPB
MTRES1
C18orf25
AP3B1
ETFBKMT
FAF2
DOK2
MRPL19
TRMT61B
AQR
TIMM23B
PARG
PDE4A
LSG1
C17orf75
NOXA1
ZNF805
PTPN22
CHERP
ZNF286A
PLEC
PRPF19
NDUFS1
EEF1B2
LRRC37A3
DHX16
CASP8
MRPL52
MRPL20
LDLR
EIF1B
MAL
SUN2
YBEY
MCM3AP
EIF2B3
FLT3LG
SYAP1
VIRMA
PDCD2
TERF2
EID2B
DAXX
ZBTB22
POLR2H
CLCN2
GZF1
PPIH
KIF21B
ITPKB
CNN2
POLR2J3
ZCCHC4
TSFM
ZCCHC8
SLA
RAB37
TRUB2
COQ4
RAD52
SNUPN
RAB8B
MOB4
SLTM
POLR1F
CABIN1
C3AR1
EIF2B2
ASNSD1
ASDURF
U2SURP
HUS1
ZNF879
PSMG1
ANAPC10
ABCE1
SYTL3
ZNF773
NR1H2
ATAD1
SYT11
GON4L
PPP1R16B
GORASP2
GGNBP2
RAD23A
TMEM41A
CRBN
SLC30A6
EIF3D
KIFAP3
THAP12
GVQW3
CPPED1
ATP5MC3
SLC38A2
ACTRT3
PIK3R4
TTLL5
ERG28
BRAP
ACAD10
DDX19A
ZFYVE16
RWDD1
ZNF302
VPS72
SEH1L
TMEM30A
DSE
ATAD5
TSPYL1
CD79A
TM9SF2
CBX1
RTCA
TMEM248
CMTR1
CWF19L2
FMNL1
NDUFB5
MRPL47
SYPL1
COX7C
GLO1
CASC3
RANBP1
TRMT2A
RPS3A
TM2D3
MRPS35
METTL3
RUNX1
SMARCC1
ZBTB43
MAPKBP1
ZNF91
TMX3
CCDC102B
ZNF784
TNFAIP8L1
KDM8
DDX23
ITCH
GTF2B
PEX12
RAP2C
MTERF1
USO1
CSNK1A1
POLE4
USP30
SCMH1
YTHDF2
INO80D
IRF2BPL
SRP19
CCDC86
GIMAP1-GIMAP5
GIMAP1
TFAM
CHIC2
FAM98A
RGL4
RNF139
FBXO43
POLR2K
SRSF11
FAF1
CENPN
SNU13
XRRA1
SPCS2
CUL5
MMADHC
CIPC
SSNA1
ANAPC2
PARN
BFAR
URM1
SNRPB2
CD55
LMNA
TMTC3
CEP290
PTPN23
DSN1
PIGF
CRIPT
SRPK2
MAP3K7
SPN
NSFL1C
IARS2
BPNT1
EIF2S1
ATP6V1D
RIC1
RBM7
C11orf71
POMP
CHPF2
MGAT5
THAP5
DNAJB9
ERGIC3
FAM133B
SNRPE
PRKAB1
IL17RA
LGALS8
GNE
TTC1
DCAF1
MZF1
TTC5
DNAJC24
DCDC1
PIGM
PIK3C3
HACL1
BTD
INTS1
CLUH
MRPL16
SMG8
NOP10
NUTM1
ELOF1
SP4
NDUFC1
NAA15
SLC26A11
COX6A1
NOLC1
LYRM7
KRR1
TIMMDC1
SNAPC5
TOMM5
TRIM46
KRTCAP2
ATXN1L
CKS2
STK38
ATG4C
ATG16L1
NFX1
TRIP11
SERP1
EIF2A
LRRC29
ZMYND11
TSN
CDCA8
C1orf109
ATG7
KDM1A
TEX46
C16orf91
RPS6KB2
UCHL5
RO60
ZBTB40
SNX19
TOX2
ANGEL2
GNPAT
C1orf131
UTP15
ANKRA2
NAA20
POLR2C
RB1CC1
SBNO1
TBC1D15
ILF3
ACTR2
NKIRAS1
RPL15
NAPG
ABHD10
FCHO1
GFM1
PPIL4
MFSD4B
ZNF638
NAGK
TPK1
TGFBR2
MAD2L1BP
DOCK8
XPOT
TMEM101
PDXDC1
MICU2
CBWD1
GCLC
WDR7
PPM1A
GPAA1
EXOSC4
ZNF561
SIRT4
NRF1
H4C3
H1-6
SLC3A2
BLOC1S5
LINS1
ASB7
RGL1
ARPC5
ARL8B
EMILIN1
MDM4
NUP210L
NMNAT1
LZIC
RCBTB2
IPO11
DPP9
LRRC40
PSMA6
SELENOH
OGFOD1
NUDT21
EDEM2
MICOS13
HSD11B1L
CNOT6L
TUBA1B
HNRNPUL1
SAFB2
SAFB
DPY19L4
HSPE1-MOB4
HSPE1
HSPD1
TKFC
DDB1
VIM
USP19
TOP3B
BNIP1
MRPL45
OTUD3
INPP4A
FEM1C
IARS1
YPEL1
DUS2
DDX28
RNF14
EIF2B5
MIS18A
SUCLG2
SMG9
FBXO38
NDFIP1
ACBD6
C6orf89
DYNLRB2
LOC100289561
INTS5
PAK1IP1
C6orf52
SLC35A4
APBB3
TMCO1
C15orf40
AURKAIP1
SEC22B
STAT1
CLN3
APOBR
RAD21
SRRD
HPS4
OPA3
STK16
GLB1L
PPP1R8
WDR24
TAB1
PCNP
PNISR
STRN
ZMAT2
MTERF4