ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX671999 | ES cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◣ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

FRG2
FRG2C
ARHGAP39
CCDC200
POLH
XPO5
NOC4L
DDX51
ZNF718
ZNF595
SCGB1C2
SCGB1C1
C1QTNF12
PDE4DIP
ZNF329
NBPF1
PCBP3
PPP2R5A
SLC38A9
H1-7
PPARD
OMP
GAGE2A
COLEC11
C1GALT1C1L
GAGE12I
GAGE12E
GAGE12D
GAGE12C
GAGE12G
GAGE12F
GAGE6
GAGE12B
ERBB3
SH2D4B
NUDT3
SLC25A18
LRIG2
HNRNPL
GTF3C2
LRTM2
GAGE12H
RNASE10
FANK1
SHTN1
HLA-F
CLEC12A
VPS37C
HYOU1
AMDHD1
CCDC38
YWHAE
CYP1A1
VN1R4
SCARB1
TM4SF1
H4C12
H4C11
PSPC1
SLC2A11
NOTCH2NLC
NOTCH2
C2CD4C
EPN1
INPP5F
TBC1D5
PRR23D2
PRR23D1
PPP1R3B
GOLGA6L7
ASMTL
MST1L
CBX1
PRSS41
GAGE2E
GAGE2D
GAGE2C
FASTKD1
PIN4
TTC5
ZNF419
FAM86B2
NOTCH2NLB
NOTCH2NLA
NEFH
SIMC1
ZBTB11
ZNF30
NPIPB6
UGT1A3
PRKAA1
DUX4
PIGZ
DTX2
TMX2
MED19
TMEM98
MORF4L1
ARHGEF35
SUPT6H
SDF2
ARHGAP19
HADH
SDHAF2
CPSF7
GAGE2B
GAGE7
GAGE5
GAGE4
OR8B3
TBC1D3F
TBC1D3H
TBC1D3G
CEP350
DBNDD1
GAGE8
CD47
NPIPB9
TBC1D3L
TBC1D3B
MRTFA
GTF2A1L
DHRS4L2
ZNF84
RAB3IP
TIMM23B
PARG
C2orf69
PPP2CA
CENPVL3
LIMD1
SLC25A13
RANBP17
RGS3
PGLS
YY1
SARDH
POTEB3
POTEB
PPM1D
HERC2
HK1
NAPB
DLAT
TULP4
THOC3
PPRC1
SUGP1
MAU2
CCZ1
CS
CHRFAM7A
UBE2L3
RIMBP3C
RIMBP3B
GINS3
BCKDK
FAM156A
FAM156B
CBWD5
CBWD3
CBWD6
RSAD1
LONP1
CATSPERD
NOMO1
DGKE
C17orf67
STX17
MUC2
TCEA2
TIMM23
CLINT1
PSAT1
RAB35
ANKDD1B
MKRN2OS
MKRN2
CZIB
SLC25A32
DCAF13
RFC4
TIGD6
HMGXB3
CCZ1B
ZNF717
CLTA
DNAH3
FIGLA
RPL11
EML2
ZFP91
LPXN
NBPF15
IQCF2
BRMS1L
ZNF843
ABHD2
ZNF396
HBEGF
MTMR6
ASNS
CCNL1
GRPEL1
LOC100289561
PRAMEF33
PRAMEF10
DNAJC3
CENPVL2
CENPVL1
PCSK6
RABEP1
SLX1B
SLX1A
BOLA2B
BOLA2
LRRC49
THAP10
PAK2
METTL16
GALNT10
SULT1A4
SULT1A3
REXO2
TENT5B
GRK7
TICRR
MSX2
PIWIL1
SERP1
EIF2A
ARHGEF5
GAGE13
ANKFY1
LMNA
MYO5A
LYST
FNBP4
RPS5
TADA1
ENO1
FBXL5
SLC35G1
ZNF888
GSPT2
CMTM3
LZTS3
BTRC
KRT82
PPP2R5C
RPL35
ARPC5L
ZNF706
IFI27L1
DDX24
CCN3
SUSD5
TMEM30A
PIK3IP1
COL26A1
C9orf40
AP3B2
LAPTM4B
MS4A1
TEC
DHX15
PCDHB3
CR2
PCDHB2
ATP8A2
OR10AC1
CERS5
RAB7A
FIGNL1
WDR45
H1-8
WASHC2C
USP7
TAF4B
THOC5
CASC3
MTR
ECE1
PAAF1
COA4
ARHGAP26
TMEM115
UVRAG
LYN
SLC35G5
THOC2
DR1
CRH
PDXDC1
UBE2Q1
C17orf50
RAD51D
FNDC8
HERC3
PYURF
PIGY
GPR89B
TMEM41B
FAM86B1
LGR6
TTBK2
CTSL
ZNF443
MAPKAPK3
MXD1
ZNF346
ZFP2
NOTO
LOXL2
HMGB1
USPL1
LMLN2
BOLA2-SMG1P6
CHGB
PTPA
CRAT
CRELD1
SEC61B
ROPN1
GTPBP4
HIC2
RMDN2
M1AP
PLPP5
ILRUN
CALCOCO2
ZNF823
IP6K1
MAGEA8
WDR36
RUVBL1
UBE4B
EEFSEC
ZNF451
YAE1
NDEL1
MACIR
TIMP4
TESK2
XAGE1B
XAGE1A
JMJD1C
YWHAG
SRGAP1
HNRNPM
MATN2
MCM6
VASH2
EMP2
SLC25A28
CEP135
NAP1L3
FAM133A
TMEM60
PHTF2
ZNF384
TRIM37
ADCK1
MON1A
UBR7
GON7
HACD3
POM121C
MCTP2
SCOC
PRKAR2A
GPC3
LMTK3
TMEM163
GAGE12J
DUSP16
SERBP1
ZNF416
PDK2
RNF149
POTEH
MEGF9
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
RAB5B
MIS18A
FH
SOCS3
ROPN1B
TPT1
FAM111B
PKP3
COPZ2
REM1
DEFB124
SNRPD3
GUCD1
TMEM202
IL17RA
PDGFD
PACC1
ZNF354B
KBTBD8
ERN2
RNF7
IPO7
TMEM63B
MRPL14
UBE2L6
CAD
DLEC1
ATRAID
LRRC8C
RPN2
MROH8
CFAP206
FAM234B
NHLRC1
CEP112
ZBTB8B
SHISAL2B
CASR
FBXO39
CEP126
ANGPTL5
POLD3
NF2
SRSF2
MFSD11
PLAG1
CHCHD7
CYTH2
FAR2
LRRN4
RAB31
ANKRD36C
RPL22
RTP3
SNX27
ZXDC
ZFYVE27
ZBTB39
C8orf76
NEDD4
INO80
IFNGR1
TTC12
FLNB
CDCP1
IRF8
NUTM2G
FFAR4
KRTAP2-1
MOB4
CRTAP
SEMA4B
SLC7A6
POMK
JAK2
HIF1A
ZNF778
DEPTOR
EIF3F
SRSF7
OR6J1
GMEB2
ARHGAP9
RABGEF1
INSL6
KCNJ9
ZFP37
MICOS10-NBL1
MICOS10
SRSF9
DYNLL1
ALS2
ADO
RND3
SYT15
LOC102724488
SPINT1
ZNF672
CT47A9
CT47A8
CT47A6
CT47A5
CT47A4
CT47A3
CT47A2
CT47A12
CT47A11
CT47A10
CT47A1
RHOG
TBPL1
TRPC4AP
STAG3
GPC2
CSRNP1
RPS4X
MPDU1
LOC100996842
CD68
CAPN7
RPS27L
FAM76A
NT5C3A
PSAP
FUCA1
USP33
CHRM3
TOR3A
RIPK4
IVD
XBP1
CTNNAL1
TTC9
PJA1
TMEM222
METTL8
DCAF17
DMTF1
TNIP1
GTF2A2
ALDH3A2
SLC22A5
LUC7L
BICD1
CDKN2D
KRI1
SLC30A10
ERICH2
B3GALNT1
ZNF514
CDH22
ARRDC2
ANKRD36
SMG1
DPY19L4
HDAC1
DGKQ
ERCC1
SAXO1
UBXN4
RRAGA
RAB24
PRELID1
CPEB3
GNE
DUSP22
HACE1
RIPK2
C6orf62
GNPNAT1
THAP5
DNAJB9
SLC13A3
PTBP3
UBA2
ACO1
NPTN
EID1
FIP1L1
ZBTB43
SCYL2
DEPDC4
BVES
MTMR3
ATCAY
IGSF8
TMEM47
CLDN4
RTN4
ANGEL1
STK40
PJA2
CAAP1
DLC1
GMFB
RDH16
DIXDC1
NANOGP8
DNAJC13
NOMO3
SLF2
COPS3
HAAO
PRRG4
CLDN1
OPTN
CCDC3
STMN1
MAL2
SLC7A2
NODAL
SH3BP5L
PSMD8
RASL11A
EFR3A
PREB
UHMK1
PRR30
GALNT3
FBN1
MIER1
USP3
TSKU
NFYC
NEMP2
FGD4
FEM1A
MND1
PPM1A
LSM6
FARP2
DNAAF2
P3H2
CORIN
CFAP97D1
CSNK1D
C1orf216
TMEM263
UCK1
TBC1D3K
TBC1D3I
TBC1D3E
TBC1D3D
TBC1D3C
TBC1D3
DUSP3
ZNF287
MGLL
C8orf34
ABCC6
ZNF134
ARL17B
NGRN
ARL17A
KIAA0319
SAFB2
SAFB
RAB4B
MIA
C14orf28
RAB22A
MAPKAP1
UQCRFS1
ICA1
NEK5
SEC16A
C9orf163
SYT13
PRDX3
SPDYE14
SPDYE10P
CASTOR2
RTL10
GNB1L
ZNF75A
TIGD7
FAM189B
PPP4C
TMOD3
KIAA2026
KCTD8
BMPR1A
MAN1A1
PHC3
SH3D21
CST3
CCDC136
SCAND1
SCAF11
TAF5
KIF2A
ARL2BP
ACAT1
LRRC58
SLC36A1
DDT
KTI12
UNKL
BTF3
SLC30A9
CFDP1
RLN2
SLC7A1
NF1
FOXD4L5
TEX45
NPAP1
CLK4
SLC25A51
IPO4
GAS2L3
RAB1A
RIC1
IREB2
CORO2A
SLC4A8
SYAP1
GHITM
L3HYPDH
JKAMP
GALNT6
SMARCE1
EFR3B
SIRT2
NFKBIB
FOXRED2
DDX17
PPP1CB
POLI
SEC11C
VANGL2
KCTD13
FAM193B
POLR3H
TRERF1
RPRM
AGO2
ANGPTL4
KCNMB4
TTC28
USP44
BICC1
NPY
WTIP
PDLIM3
SNX18
ZNF786
PCDHA1
PANX2
BRSK2
FAM153B
CT45A10
MID1
PSMG2
CEP76
RIMBP3
AACS
PODXL
ACTR3B
TAMALIN
ACVR1B
ZNF782
DYNC1H1
SEC14L2
HBZ
CTAG1B
CTAG1A
GTF2H2
SNX17
EIF2B4
ARL8B
HPCAL1
PKN2
FBXO11
CBR3
RBCK1
MXI1
SEC61A2
ERMP1
COX5A
OSBPL1A
RCL1
DTNBP1
MIEF1
GAB2
MOSPD1
MERTK
C10orf53
CDS1
SLC5A3
MRPS6
TTC8
PCDHB13
SNX33
EDNRA
GPR26
KIF2C
C7orf26
MTIF3
ZCWPW2
AZI2
SPECC1
ADAT1
GATM
PHETA1
HOMER1
DYM
BBS2
NECTIN3
DAAM1
CDCA7
PAXIP1
TMEFF1
TDRD5
GJC1
ITPRID1
MAD1L1
TACC1
ORMDL3
NUTM2E
AMMECR1L
TCP1
MRPL18
MTRR
FASTKD3
KLHL15
CGB8
CGB5
RPS20
PSMD6
SMU1
STXBP3
DUSP12
SULT1B1
SH3BGRL3
SMG6
RNASEH2C
MPI
ACOT6
SRR
RNF135
MTCH2
ASH1L
ZNF607
ZDHHC13
PRKD3
USP20
C9orf78
SLC5A8
CHST14
PCDHGA1
FAM219B
AGFG2
SNX6
PLLP
HPDL
MOXD1
CDK18
KCNE4
SLC15A1
NMRK2
TMED2
PDE12
EEF2K
PCYT1A
PPIL2
RMND5B
REV3L
CASP7
PURB
TEX49
CDC14A
SLAIN2
TSTD2
NCBP1
FZD4
ITPR2
RCN1
SLC7A5
RNF32
NRXN2
DYNLT1
ST3GAL6
IL17RD
ALOX5
HMCN2
GLP1R
PIP4P2
LRP6
VWA8
KLF1
DDX5
CEP95
OSBPL3
HECTD3
HM13
KBTBD7
RXYLT1
SEC62
DENND2B
HP1BP3
PCCB
SPA17
SIAE
MAP11
FAM72B
THUMPD2
GCDH
JTB
AKIP1
LHFPL6
BDNF
PCMTD1
CAMK1G
ZNF418
MMP28
ACOX3
ATF7IP
VRK2
PLAGL1
SPG11
GAS7
IQSEC1
EFCAB14
RFTN1
LGALS8
SRPK2
SPRYD7
MAP7
DCTD
GMCL1
MATR3
UBE2D1
HDHD2
WIF1
SPTBN1
DHRS4L1
CMBL
TPST1
RNASEH2B
ACTL6A
NPY4R2
NPY4R
IFT22
GLRX5
SENP7
EFCAB6
WDR59
ARGLU1
STK33
OR2AT4
TVP23C
FAM110B
PCDHB12
CYP11A1
H3Y2
RHBDL3
SART1
GTSE1
PPM1L
MGAT3
TPI1
CLDN23
DYDC2
DYDC1
SLC22A17
NSFL1C
DGKH
AKIRIN2
GDI2
IL12A
PCMTD2
UGP2
POMT1
PLPP3
GNG4
ELOVL7
H2AX
HSD11B2
NRROS
JAM2
SSTR2
CHD1L
PIGW
MYO19
RCHY1
KANSL1
RANGAP1
TCHP
RPL10A
SYN3
SMAP1
SEPTIN9
UBIAD1
SELENOK
MRM3
GLOD4
LLPH
ZNF700
C2orf73
UBR4
SYBU
PPP2R1A
YRDC
C1orf122
DPEP2
CSNK2A1
DCTN1
GPD2
ZNF200
DPYSL3
GRK3
FBXW9