ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11220466 | HT-29
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◣ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

PLEC
DBNDD2
DUSP6
GCNT3
MMP7
THEM4
EPS8L1
RDH13
SEC14L5
IST1
GDPGP1
CIB1
CTAG1B
CTAG1A
CEP72
ABHD11
SGCE
PEG10
RILP
CBX1
TTC13
ARV1
ATP1A1
KCNJ15
EXTL2
DMPK
CLDN16
PTHLH
BMT2
FKBP2
LOC114841035
VEGFB
SDCCAG8
CEP170
MICALL2
NDUFB3
FAM126B
BCAR3
RHOV
KRBA1
SDR42E1
LCN2
ZNF562
RNF187
SUSD1
SARS2
MRPS12
ST6GALNAC6
LIPA
MIGA1
LAT2
SLC12A7
ZNF341
ALDH3A1
SEM1
PDE11A
OTUD7A
SLC45A4
GINS1
PER1
ZNF609
HOXA3
TMEM70
ELOC
PUM1
CUEDC1
LAMA5
OSBPL3
TBC1D22A
NDFIP1
PDXDC1
FMN1
TMEM114
PI4K2A
FAAH
SLC41A3
MAML1
FRG2C
EPHB3
PRELID3B
MUC5AC
SOCS5
IFT88
TPM1
ANXA2R
KLF4
PRMT1
NRSN2
INTS1
SPAAR
SP4
HRCT1
CEBPB
LGR5
TLNRD1
FAM83A
ZPBP2
IKZF3
SLC25A26
RXRA
SFT2D3
TSC22D2
ADD3
NAA20
SDC4
PCP4L1
KRT8
ST6GALNAC4
EPB41L4B
ZBP1
CLK4
SAMD4B
GOLIM4
SRF
BSDC1
MBOAT4
RFC1
P2RY4
SH2D3C
ID1
ZNFX1
RERE
KLK6
WWTR1
ERCC1
DUSP22
TBX10
IL18
TEX12
RABGAP1
PRKAR1B
NRBP2
BAIAP2
CCN5
TLR2
PPP5C
BHLHE40
PRKD2
RABGAP1L
MYH9
MKNK1
FBXO32
TOX2
DUX4
MTMR6
RAB30
ABL1
NBL1
ITGA3
IL4
NOS3
COMT
RBBP9
JMJD1C
REEP3
RNF13
ZNF233
PSRC1
YKT6
YTHDC2
NBN
CD47
GRPEL1
KIAA1841
HERPUD2
ECE1
SH3BP4
MAPRE2
ZNF211
DEGS2
HLA-DMA
PNPLA7
KLK11
PLA2G10
MRGPRF
ZNF761
MST1L
TEX9
RFX7
OR9A4
TMEM41A
UBE2F
GPD1L
DYNC1LI2
CREB3L1
MEX3C
SIPA1
VIL1
COL23A1
YES1
ANKRD22
ZNF226
MAEA
WDR43
MUC3A
TOLLIP
WDR74
CALD1
ZNF28
ZHX1-C8orf76
ZHX1
YTHDF1
POF1B
PIGW
MYO19
TRAM2
TPSB2
TPSG1
GUK1
GJC2
COL18A1
OTUB2
TET3
CCDC200
TMEM44
DAB1
TMEM59
TCEANC2
OMA1
PIK3R1
CEBPG
RAVER2
CCDC130
ZFP91
LPXN
MLLT6
CAMK2D
ARHGEF2
GOLPH3L
LSR
PCNX3
MAP3K11
MTIF3
LXN
FBXL22
TIGD2
ADAMTS7
CLDN4
RND3
ABCC3
TEX52
PRRC1
TNNI2
SYT8
VDR
RHOQ
ATP6V1E2
BCL3
TRIM29
ADAM8
TXNRD2
ACYP2
H4C8
NT5DC1
IRF2BP2
LAMA3
FBXO44
FBXO2
ATP2C2
TRIB1
GCGR
MEIS2
TWF2
SGPP2
ECI1
HMGA1
ASS1
BANP
MRPL45
ABHD10
CIZ1
CLCN5
ZBTB49
LYAR
BCL6
FUT2
C3orf14
LFNG
SH2D6
NKAIN4
OGFOD1
NUDT21
SH3BGRL2
P3H4
FKBP10
STPG1
NIPAL3
NPAS4
RAD51D
FNDC8
LDLRAD2
HNRNPD
NPFF
RPL24
ITPR3
SAMD12
ZZZ3
SEC14L1
HEXIM1
BIRC3
FGFRL1
PPP6R1
MATK
PELATON
SPINT2
NDRG1
UGCG
PPP1R9A
SLC25A51
PAAF1
COA4
SPACA6
CHD1L
CYRIB
NME4
TMEM89
BCL9L
WAC
CEACAM5
DGKZ
RHEX
RGL3
BICDL2
ZNF280D
CATSPERG
ZBTB7C
ZNF385A
SH3BP2
HIBADH
LRRD1
LUC7L2
FMC1-LUC7L2
FMC1
GPRC5C
RAB26
HNRNPH1
TARS1
NKPD1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
LOC101927572
ALKBH6
OR5AK2
SSR3
C1QTNF9
FGFBP3
GASK1A
SEC23B
IFI44
VWA7
RUFY1
BCAS1
CATIP
ARHGEF1
IMPA2
ANO10
GDPD5
STYK1
MTBP
MRPL13
PIP4P2
ZCRB1
PPHLN1
NUAK2
RNF39
CRLF1
TMEM59L
VWA1
TCERG1
ARHGEF39
EHD4
CA9
PIK3C2B
ACTN4
QRICH1
ATF3
DHDH
MPZL2
WDFY2
IGFBP1
FAM209A
METTL8
DCAF17
CORT
OSBP
BCAR1
RNF103-CHMP3
RMND5A
TUFT1
CCDC183
LAD1
ZNF326
TMEM150B
ZNF317
RPS7
ARL6
HMGB1
USPL1
HES3
RAB1A
MANF
SLC1A5
LHX4
SEMA4B
ERAP1
RND1
INTS5
PGAP2
PPP1R8
CMPK2
ZSCAN25
MSMO1
UBLCP1
SDR16C5
CDK19
AMD1
YPEL3
PLPPR2
ELK1
FRG2
COQ2
RGL2
PMEPA1
CSAD
ZNF740
ZNF292
MSL2
PIGF
CRIPT
RAB22A
LRP5
ZNF805
ZNF652
COMMD4
CHD9
RAPGEFL1
TBCE
RHCG
LRRC66
STX1A
RNF144A
SCAF11
TEX44
ANK3
ZNF112
SERBP1
MYRF
FAM227B
DTWD1
TTC4
ZC3H10
RPL41
ADCY4
TMPRSS4
RIPK3
KLK12
GJB2
SPTSSB
SLC29A2
HIP1
PPA1
METTL21C
ROPN1
ATP13A2
KCNQ1
LNPEP
DCTN4
TATDN2
ABCC10
RINL
SYT3
AGBL2
ATAD2
NOL11
INPP5A
PLD1
CYP27A1
ADPRHL1
NABP1
TEF
PDIA2
RGS11
ARHGDIG
RBBP5
LPIN1
YARS2
SHOC2
BBIP1
MICAL3
OGDH
CD82
ALG1L
KRT15
SMARCD2
ZNF44
WNT2B
CEACAM19
GPR39
TIMM23
C17orf50
EGR2
FAM50A
MRPL44
TATDN1
NDUFB9
MAP3K3
FAM153B
LCE3A
LCE3B
RARG
ING2
MOCS1
NUDT7
TCEAL1
CAPNS1
PTGES
ORC4
MBD5
KDSR
MYEOV
GPR37
TTBK2
ANGPTL4
TMTC2
PCTP
PLD3
C19orf47
RNFT1
RAB11FIP5
MMEL1
FBXO46
PCDH1
MEIOSIN
TACC2
IRAK2
SERHL2
HBP1
TMEM179B
MBNL2
HOXB3
HOXB5
SLC9A3
WNT9A
RPL27
THAP11
NUTF2
CENPT
IAH1
RAB6D
BRPF1
PPP2R3A
TMEM229B
CCDC150
PPME1
C2CD3
STK40
VEGFA
TBR1
COL14A1
PBX1
SNAP47
HSD17B12
SGMS1
GZF1
ARHGDIB
PSMB8
HACL1
BTD
ZNF628
ENG
STAU1
VIRMA
DDX27
CBFA2T2
USH1C
OTOG
DIRAS2
ZNF670
PRPSAP2
SLC25A40
DBF4
PDE5A
HEBP1
HSD17B2
ZCCHC4
KLRD1
SLC30A6
USP48
JADE1
COX19
TP53I3
LTBP4
ITGB4
MTNR1A
METAP1
TES
SLC35A3
TPP1
CMTM4
TEPP
EHF
CNGB1
LOXL4
CRYBG2
MTF2
CTNNB1
MYCBP2
RBM39
PRR15L
VRK2
NOXO1
GFER
PTK6
SETSIP
BTBD8
MED30
ALG10
SNX18
RBM7
C11orf71
SNUPN
PHF12
ETHE1
GRPEL2
KRTAP10-8
MAPK1IP1L
SMIM12
JOSD2
ASPDH
MARCHF9
CDK4
ERVW-1
GALNT5
PCF11
FZD4
SLC5A1
ANKK1
SNCG
MMRN2
NUF2
POLE4
TMEM42
PIK3R3
TSPAN1
P3R3URF-PIK3R3
P3R3URF
SF3A3
COMMD2
APC
PDK3
WASHC5
NSMCE2
PSENEN
LIN37
MXD3
STAG2
ZNF587B
INF2
GORASP2
MEGF8
IBA57
EVPL
LINGO1
ZFAT
LRCH1
PARP16
LEPR
PLEKHB1
LEPROT
TRIM3
MOB2
ATP5MPL
TAF10
BMF
ZFYVE28
GPBP1
CCDC166
SYNPO
CFAP99
SSBP1
CRKL
GPR89B
AMER1
PDE2A
FAM110A
TXNL4B
DHX38
HYAL1
RSL24D1
UBE2D3
CEP41
TSPAN14
RP9
IKBKE
TMA7
CCDC51
SPON1
DOCK1
HOXA9
HOXA10
HIBCH
SLC37A2
ZNHIT2
E2F6
MRPL49
FAU
CLEC2D
ODF3L1
FGF19
SEMA3E
EIF2D
TRMT5
SLC38A6
OGA
ZNF234
CPNE5
GBA
MTPN
LUZP6
RAD50
SDCBP2
DOCK6
SLC24A1
DNAJC25-GNG10
DNAJC25
RPS6KA1
RASA3
FMR1
STRADA
GCA
TNFRSF11B
COLEC10
ADNP
TRAM1
DCP1B
LIMK1
ACTR3
TAF1A
NCEH1
TGFB1
BGLAP
PLEKHG6
TMEM39A
ZMYM2
RAC2
LRATD2
SH3YL1
ACP1
RASGEF1B
ATP6V0A4
ZMPSTE24
EPS8
MAGOH
CREM
TMEM216
ARHGAP24
PYROXD2
RPL13
KIF21B
METTL21A
TMEM92
MYLK2
PPP2R5B
RTN4
TNFAIP8
TTYH3
SAMD14
TSKU
LRRC20
RPSA
NUDT19
TMEM43
CHCHD4
CCR7
C11orf80
NCK1
THEMIS2
FBXL18
SSH3
TNFRSF11A
WDR5B
TBC1D23
KIF11
CEP250
GDF5
LIPE
DSTYK
ABLIM1
MTHFD2L
CNTRL
ARL4A
MRPS28
PHLDB2
TESK2
PROCR
DHTKD1
PRIMPOL
CASP3
LOC643802
KAAG1
DCDC2
RAP2A
PTCD3
POLR1A
ENKUR
SOD3
CBR1
PRMT3
GSN
RALGDS
C1orf56
KRT2
YAP1
KLHL7
CNP
MRPL34
POMGNT1
ABHD8
DDA1
STARD4
MARK2
TMEM140
DNASE1L1
GTF2H2
PARP15
RHOT1
EVL
RBFOX2
PNPLA8
SLC16A3
CASZ1
INSC
PPP1R11
FAM133B
SESN1
CEP57L1
NMRAL1
HMOX2
DIDO1
GID8
DET1
HMOX1
KSR2
ZFAND1
UBXN6
TAS2R14
PPIP5K2
SMU1
MRPL16
SGMS2
MAP3K14
GLIPR1L1
CAPS2
GTDC1
RNF144B
TMX4
S100A10
CDCP2
RPS14
TIPARP
SCYL3
ROM1
EML3
DDX11
IL15RA
LENG8
UPK3A
B2M
INTS12
GSTCD
ATP5MC2
TARS3
RPS19
TFE3
TNNI3
USP54
CTTNBP2NL
SYPL1
C19orf12
CTDSPL2
AHSG
ZNF524
TBCEL-TECTA
TBCEL
SCYL2
DEPDC4
RAB11FIP4
ZNF865
ATF7IP2
TUT1
TMEM65
FIS1
CYP4X1
PFDN5
MYG1
TMEM60
PHTF2
SLC4A2
CDK5
IQCH
AAGAB
ZNF337
PRKCG
B3GAT3
GALNT12
SPICE1
F2RL1
AQP5
DENND3
KLHL30
ZNF572
AURKAIP1
STAT1
METTL3
TMEM131L
SOCS6
SERPINA1
TMEM265
STX16
TPR
ODR4
SNRPE
GABPA
ATP5PF
MAD2L1BP
NEGR1
GTPBP2
COA7
MRGPRX3
TBX3
UTP3
RANBP1
TRMT2A
ELF1
WBP4
ZNF219
SPAG4
SAMHD1
ST20-MTHFS
C2CD5
SLC25A13
OARD1
NFYA
TMEM229A
IL4I1
ACSS1
CYP3A5
SPATA12
YWHAB
DHPS
CCPG1
C15orf65
IL1RAP
CA2
TTC9C
HNRNPUL2
ILDR1
CSF2
FEM1C
UQCC1
DUOXA1
INTS6L
R3HDM4
RAB10
C11orf24
PRSS16
MESP1
SERINC2
INSL4
THOC5
NYAP1
ATP1B1
CENPVL2
CENPVL1
ITGB3BP
EFCAB7
CDYL
MRPL3
S100A9
PSMD11
LYPLA2
PLAU
RARA
DUOX1
MED4
FAM13A
TM9SF4
TIMM23B
PARG
DGAT1
KIF20A
BRD8
SERPINI1
PDCD10
PLPP1
CRY2
RASSF6
IQCF1
ZNF155