ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX17826860 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◣ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MTRNR2L2
MSH3
DHFR
MTRNR2L1
MTRNR2L8
COL23A1
DUX4
FRG2C
WDR74
MTRNR2L9
MUC3A
CCDC200
FRG2
SMARCD2
GBA
ITGB3BP
EFCAB7
EPN1
RPS7
POLR2J3
SNX16
LINGO1
TRIM48
RBBP5
BRWD1
TOR1AIP2
TOR1AIP1
PRPSAP1
DCP1A
ZNF76
ATXN7L2
FRA10AC1
TEX19
STX16
YIPF2
TIMM29
TMEM222
MED23
PEX3
ADAT2
GALR1
NDUFS7
MRPS23
CCDC97
SNRPD3
GUCD1
TMEM101
BANP
PAXBP1
DRG2
EIF3F
SCNM1
LYSMD1
SPATC1L
USP30
DSTYK
CASC3
INO80C
MRPL44
TTC4
LRP6
PSD
FBXL15
YARS1
S100PBP
FAM207A
NUF2
NME1
TTC26
SSBP1
GFM2
MRPL48
TATDN3
NSL1
C18orf21
WASHC1
RBL1
SMG8
USP17L20
USP17L22
SNAP47
JMJD4
MAN2C1
KAT6A
KMT2A
ZNF408
ARHGAP1
INTS12
GSTCD
NSFL1C
SUPT7L
SLC4A1AP
IPO4
LMAN2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
RPL37
RPL5
DCAF10
GTF2H4
SEC13
WBP1
INO80B
LRRC59
REXO4
ADAMTS13
KDM3A
THEM4
ZNF335
SCGB1C2
SCGB1C1
GTF3C3
TMEM242
DRAP1
C11orf68
METTL9
SLC39A3
GTF2H2
WDR11
UTP3
PSMF1
PEF1
STAT3
GTF3C5
TCF3
MRPS31
ZNF165
STX6
RPL38
ARL8B
BNIP1
CDIPT
CCDC66
TACO1
NCBP3
KDM5C
CDK5RAP1
RFXANK
BORCS8-MEF2B
BORCS8
NOTCH2
PSMD3
SMG7
UPF2
MTF2
COX16
BMS1
RUVBL1
MRPL39
EEFSEC
MCOLN1
PRRG2
NOSIP
TSNAX
NOP16
HIGD2A
PTPN21
SLC24A1
ZBTB45
RRP15
TAOK3
PDE4A
FXN
SUDS3
INTS5
AGK
HSPE1-MOB4
HSPE1
HSPD1
COMMD2
DMAP1
TBC1D19
PAFAH2
NMNAT1
LZIC
PDE12
NDUFS3
KBTBD4
BRF2
SNRPE
ARHGEF1
STAT1
ZSCAN22
C11orf49
TXNIP
STX18
DPY19L4
LRRC37A3
SOD2
ZNF296
GEMIN7
DCT
WTAP
GOSR2
AURKAIP1
GFI1B
MAPK1IP1L
TSC1
MRPL55
DNAJB12
MRPS18C
HELQ
PSMB7
TMEM167B
TOMM22
NLRX1
FRAT1
DDX1
PEMT
EIF2D
TOP3B
SLC35A3
ZSCAN30
TXN2
BBS1
SLC35B1
SCAND1
PRPF18
ZER1
RBM17
HDAC2
RNF187
ALKBH3
CLTC
NUP54
MRPL3
IPO13
DYNC2I1
SNX12
AJUBA
WASHC2A
NKAP
TARS2
METTL18
C1orf112
FAM187A
EFTUD2
CCDC103
TVP23B
ZBTB40
HEMK1
C3orf18
SLC39A6
ELP2
UFSP2
C4orf47
GTF2H2C_2
GTF2H2C
PET117
KAT14
UBB
HEXA
ZDHHC6
VTI1A
NPAS4
TIMM22
NOXA1
MRPS33
NUP205
ZRANB2
CCDC86
BAZ2A
HMGB1
USPL1
MRPL21
IGHMBP2
RWDD1
FBXO28
ZNF524
FIZ1
ANGEL1
POLG
VPS25
PKM
SF3A3
RPL6
ZNF398
ZNF425
WASHC2C
FBXO31
KCNJ15
KRBA1
SMCO1
FAM209A
TATDN2
YPEL3
MAMDC2
AADACL4
UBE2F
BSDC1
MBOAT4
TMEM89
IRAK2
ZNF562
EXTL2
DUSP6
DEGS2
FAM153B
DBNDD2
GORASP2
CTAG1B
CTAG1A
FAM184A
PDE11A
SNCG
MMRN2
SARS2
MRPS12
ST20-MTHFS
FAM227B
DTWD1
RABGAP1
TBX6
CBX1
ZNF572
TMEM229B
TXNRD2
FEM1C
APOA1
COL18A1
APOBEC3B
BCAR3
BCR
ARHGAP39
ZNF324B
LEP
ZNF761
SUMO3
OR4K17
MON2
LUC7L2
FMC1-LUC7L2
FMC1
TLR2
PRRT1B
SAMD4B
C2orf88
PRSS38
GSTM5
PUM1
GPRC5C
ACYP2
SCCPDH
ANP32D
RFC1
FAAH
ST6GALNAC6
RBPJ
ACAA2
BAAT
SDR42E1
SLC1A7
IGFALS
CEP85
TTLL12
ADCY10
RPS29
CCDC130
TMEM41A
RAB37
SEM1
IL21R
ZNF117
CEP72
SLC27A5
YWHAQ
ZNF623
SATB1
CALCB
RPL27
ZMPSTE24
TMEM70
ELOC
PPIG
GPD1L
IL36A
RBM33
IFT88
JMJD1C
PLEC
CYP17A1
ZNFX1
MAPRE2
MROH7
GDPGP1
CIB1
POLE4
SULT1C3
ZNF577
NDUFB3
FAM126B
NOS3
RABGAP1L
TTC32
CALD1
SKP2
LMBRD2
ACOX3
C19orf18
HERPUD2
NARF
ZNF317
TRIP4
ZNF426
ZFP30
CLK4
TMEM43
CHCHD4
SELENOH
CFHR4
PNPLA7
TRMT44
APOL4
ENG
PRELID3B
TMEM14C
ATP1A1
ZSCAN31
GALNT1
ADI1
SLC33A1
DNAJC25-GNG10
DNAJC25
PSEN1
ZNF561
POLR3B
PPIP5K2
ZNF792
TMEM62
RBBP9
RPS14
LIPA
NME4
GSTA4
METTL25
CCDC59
ALG10B
TFPT
PRPF31
YTHDC2
CYBC1
RERE
CLDN16
PDCD7
SLC44A1
SLC25A51
CAT
MAD1L1
TDP2
ACOT13
FRG1
ZNF134
LMLN2
SFT2D3
SLC41A3
REEP3
TIGD2
PIK3R1
ANKRD54
RAD54L2
VTA1
NMBR
TMEM68
TGS1
EIF3L
EPS8
ATF7IP2
YY1AP1
DAP3
AUH
THAP11
NUTF2
LSG1
ZNF341
CATIP
YJU2
CENPT
PARP15
ACTL8
ZNF32
MRPL40
HIRA
GOLM2
HTR5A
BAIAP2
RPL11
ITGA4
TMEM44
CAMK1D
PDE4DIP
RTTN
SNIP1
DNALI1
PPP6R1
KDM1A
WDR36
SEC22B
TEFM
GCNT3
EIF1AD
BANF1
GLO1
FGD3
MSRA
ZNF841
C3orf14
GINS1
ZNF829
ZNF568
PPP1R11
MMACHC
LCN8
RILP
NEMF
PRIM2
ESR2
ATR
THOC5
COPS7B
ORC4
MBD5
NBN
SLC2A7
SNX17
EIF2B4
REN
DEK
MTERF4
EFCAB10
SCMH1
CCSER2
HSD17B6
SGCE
PEG10
TRUB2
COQ4
ZNF391
ILF2
LARP1
FGFBP3
ATP5MC2
KANSL3
FER1L5
POLR3E
SLC29A2
SUPT6H
SDF2
ZNF540
DUS1L
SAR1B
MOB4
C1orf167
METTL8
DCAF17
FAM133B
MRPL1
ZNF571
LSS
WDR43
AKAP10
SAMD4A
RMND1
ARMT1
DPP9
KLHL20
SPAAR
GALK2
ZNF226
C17orf75
NRBP2
IST1
LGR5
HYAL1
MTIF2
CLTB
GTPBP3
CD47
ANO8
MMP7
KIAA1549
CPPED1
ATP9B
NFE2L3
OAZ3
TUT1
GABPB2
COLEC11
DUSP16
CANT1
ZNF609
HACL1
BTD
WDR55
C16orf54
COPS4
DDX18
CTNNB1
SMIM31
FASTKD1
TEX46
TMEM79
SMG5
CHD1L
GASK1A
EXO5
ZCCHC4
SNRPB
ANXA2
MAIP1
C1GALT1C1L
GRPEL2
NR1H3
ACP2
NCOA7
OTUD7A
SERHL2
ATF7IP
TTI2
RPS20
RMDN2
RAB30
ZNF566
MLEC
CBWD5
TPR
ODR4
ZSCAN25
STAU1
LZTR1
OPA1
FBXL12
CFAP298-TCP10L
CFAP298
CASP4
TMEM114
MRPL30
MITD1
RTCA
ARID1A
TPM1
DCLRE1B
AP4B1
C8orf37
CCNC
PIN4
DGKZ
AFAP1L1
ADNP
GPAM
CD14
CBWD3
MNAT1
FAM228B
SLC45A4
GOLGA5
B4GALT7
KLRD1
ADRM1
SLTM
KLHDC9
CCAR2
C8orf58
H4C8
ANK3
PCP4L1
TMBIM4
BCL9
TSGA10
ADPRS
SLC39A13
TLNRD1
HNRNPD
EPRS1
CLDN4
EIF3E
RNASET2
TPK1
SF3B6
CCDC150
COX7A2
GMPS
TMX2
MED19
PSRC1
PDE6D
TEKT2
PSMD6
CDYL
MTBP
MRPL13
CCNI
SUGCT
MPLKIP
SDHAF3
TSFM
ADAR
SLC38A9
SRRM3
HUS1
LOC102724265
IAH1
MATK
CCNT1
INPP5F
POLR1H
ING2
COPS2
MED18
PHIP
TIPARP
REM1
DEFB124
PIGW
MYO19
PARP2
UBLCP1
TRIM38
FABP6
NAA20
CENPV
SMU1
SNRPD1
RANBP1
SLC35E2A
CRKL
CDC73
PPP5D1
CALM3
ZNF772
TGFBR2
TTLL1
MRPL34
CLUAP1
SNRPB2
MTR
PLEKHM3
PRDX3
KRTAP10-8
TRMT2A
ZNF292
NFAT5
SRSF7
SPSB1
NECAP2
LONRF2
N4BP2L2
VIRMA
WWOX
SACM1L
CCR6
FAM98B
MTOR
CNOT3
TRMT5
SLC38A6
SESN1
LNPEP
AARS2
CBWD6
ZNF280D
RBM45
RAB18
RPL26L1
TTC13
PRKAB2
ARV1
SEC23B
TTC5
CDK19
AMD1
HAX1
ZNF438
TIGD1
EIF4E2
TEX50
PPIAL4F
PPIAL4E
PPIAL4D
WWTR1
PIP4P2
MAGOH
R3HCC1
TMED1
PDCD6IP
LRIG2
CASP10
FBXO38
COA6
RNF125
RPS15
MYCBP2
FOXN1
C2orf15
RBM28
ACSM2B
PIH1D2
NKAPD1
STOML2
CADM2
PUS10
PRRC1
PEX13
MRPS14
U2SURP
VPS13B
ZNF554
ALG10
PRKAG2
NBPF1
TEX9
RFX7
H4C12
LSM5
TIAM1
HIP1
ANKRD40
C10orf88
CALCRL
CEP120
DHRS2
AAR2
KMT2D
MSL2
LPIN1
CEP57L1
DLAT
MRPL16
SMIM13
TBCK
AIMP1
SUGT1
RCHY1
GSPT1
AVL9
CEP85L
CCDC88A
POM121L2
ARRDC2
GABPA
ATP5PF
HLA-E
TARS3
CASS4
CLUL1
RNF6
TMEM42
PPP2R5B
NDFIP1
FAM234A
IQSEC3
KRR1
DHX16
MFF
ZZZ3
PRMT5
MEMO1
GCNT1
WDFY1
ITGAL
ATG101
PFKM
SRP9
H4C11
PCBP2
SLC35E2B
YTHDF2
CREM
ABHD11
EPB41
HEATR4
ABCC10
ZNF512B
PTPN4
ZNF385A
SEL1L
ZNF546
SEC14L1
FBXO22
RESF1
TRAM1
TMEM65
GNB2
CNN2
HNRNPA1L2
RPS19
GLIPR1L2
SGMS2
PDRG1
DHTKD1
NUP107
ELAVL3
SLC35G5
MRPL19
C2CD5
MED4
MTMR6
MAP1LC3B2
RPS3A
ASF1A
ZNF439
PPP1R3B
SDCCAG8
CEP170
TMEM259
TRDMT1
STK19
DXO
KNL1
EEA1
TBL1X
ZNF3
DNAJC11
CACNG1
RABGGTA
KIF2C
MUC1
OR2AP1
SETD1A
ZNF383
LTA4H
CUL2
YBEY
MCM3AP
ZNF846
SLC9A1
CNOT11
HEXIM1
GRAMD4
MIS18BP1
PES1
MMEL1
CPLX2
ARMH3
POLR2E
XKR7
ASNS
COG2
CCDC174
ERCC6L2
ATG4C
RTN4
INTS4
TPM3
EIF2B3
PAK1IP1
C6orf52
WDR70
NUDT9
RPS26
NR1H2
RCAN1
CDK12
CRBN
POLR3GL
IFI44
ANKRD34A
SHF
INKA2
DDX20
FLT3LG
RALBP1
PHF21A
SEC14L5
METAP1
IL36RN
IL36B
GARS1
NSUN4
LRRC61
CCDC115
TFPI
SET
ATAD2
TLR1
PRAME
ARL17B
CYB561D1
RUNX2
RAB5C
CELF2
DISP1
ATG5
P3H4
FKBP10
VWA8
ATP5MC3
GTF2A1L
ACBD6
NT5DC1
RIF1
CBR1
SMIM12
ASPSCR1
FAM160B1
RAP2C
FAM13A
NNT
ABLIM1
CYB5A