ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457587 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◣ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KRBA1
MTRNR2L1
SUMO3
BSDC1
PPIG
CCDC200
RABGAP1
MBOAT4
TATDN2
DUX4
COL18A1
BCR
IL36A
UBE2F
PRAME
AADACL4
FRG2C
SARS2
MRPS12
LUC7L2
FMC1-LUC7L2
FMC1
RBM33
ZNF572
SAMD4B
ATP1A1
PRRT1B
YTHDC2
MROH7
ATF7IP2
GUCA1B
TMEM41A
TMEM89
KCNJ15
YPEL3
CCDC130
PPIL2
C1orf167
FOXN1
CBX1
ZNF562
TMEM43
CHCHD4
RBBP5
ST6GAL1
POM121L2
PRELID3B
SNIP1
DNALI1
LZTR1
ZFP30
AURKAIP1
SERPIND1
FAM209A
ZNF623
ENG
NUP214
ITGB3BP
EFCAB7
TXNRD2
TRUB2
COQ4
TOP3B
YY1AP1
DAP3
DEGS2
GFI1B
TSC1
FAAH
GTF2H4
HTRA2
DQX1
POLR2E
GPX4
MRPL40
HIRA
NDUFS7
ZNF317
FAM234A
RANBP1
CRKL
TRMT2A
RBL1
JMJD1C
REEP3
MAPK1
CLK4
GPRC5C
CEP85
POLR2J3
SLC35E2A
MARCHF2
TTC32
CDK19
AMD1
FAM153B
STAU1
RCCD1
ANKRD54
EIF3L
ZNF761
LONRF2
PCBP2
ARHGAP39
SLC1A7
FEM1C
TXN2
MED23
SEPTIN5
GP1BB
UBE2L3
ZNF408
ARHGAP1
TRIM52
PIH1D2
NKAPD1
TMEM42
FAM184A
APOBEC3B
GORASP2
RPL26L1
PHF19
AGPAT1
TNPO3
LOC102724265
SMIM13
ZNF324B
ADCY10
UFD1
CDC45
COPS4
WASHC2C
YDJC
CCDC116
SSBP1
PPM1F
CNN2
TMEM259
TRANK1
ZSCAN25
SFSWAP
KAT5
SF3A3
ADAR
STX16
C9orf16
SNCG
MMRN2
NME1
RNF187
MAN2C1
C2orf88
EIF1AD
BANF1
FZD1
PAFAH2
DNAJB12
MACROD1
GAGE2B
RPS29
MAPRE2
GNB2
THAP7
SUPT7L
SLC4A1AP
TTI2
PPP5D1
CALM3
RIMBP3C
RIMBP3B
GCFC2
NDUFS6
MRPL36
TANGO2
CTAG1B
CTAG1A
SNRPE
ZNF438
MRPL42
ZMPSTE24
ALDH3B1
NOS3
PCP4L1
TMEM44
GRPEL2
ASCC2
IGFALS
RNF215
EIF2D
SUPV3L1
TFPT
PRPF31
ARTN
PACSIN1
BAG6
APOM
IL21R
BCL7B
PTPA
CRAT
IFT88
SPSB1
SPATA45
SLC24A1
GABPB2
HIP1
SUB1
KRTAP10-6
TRIM63
WDR47
TMEM191C
DDX31
GTF3C4
TMEM242
POLE4
SELENOH
CCNI
CSAD
ZNF740
CENPN
PGBD2
SAMD1
TRMT11
ZFAND6
PRPF3
RSAD2
C1orf158
AHCYL2
SLC7A6
PLD3
C19orf47
SH3GL1
CHAF1A
CLIC3
ZW10
RGL2
ZC3HC1
KCTD9
CDCA2
IQSEC1
ST3GAL4
YWHAQ
DSTYK
NBPF1
PKMYT1
SLC4A1
HLA-E
YPEL1
POLG
TPR
ODR4
CACNG1
SCGB1C2
SCGB1C1
RERE
LARP1
ZNF165
CRBN
GPR3
SYNJ2
MED15
PRIM2
ZCCHC7
SLC27A4
ACTL8
PDE2A
RPS7
ACYP2
MRPL11
HSPBP1
BRSK1
APOA1
ANKRD36C
CMIP
SYT3
ZFYVE28
UTP3
AARS2
RPS15
NME4
SMU1
CDIPT
ZNF74
SEC24C
TMEM62
ZNF554
ZNF529
TSNAX
C7orf25
TMEM191B
NUF2
REXO4
ADAMTS13
COMT
PLK3
UBAP2L
C1orf43
NFYC
DNAJC14
IDUA
EXTL2
VTA1
NMBR
PPP6R1
HUS1
PPARGC1B
EIF1B
APRT
KLHL22
FGFRL1
MMGT1
ZNFX1
PDE4DIP
WDR43
CEP164
UCP3
PAXBP1
RPS26
NUP205
OGDH
SDF2L1
GSTA4
FRG1
TOR1A
TMEM216
ATG9B
ABCB8
TUBAL3
TMEM74B
LMNB2
GOSR2
ZNF436
ZNF280A
MAGOH
ZNF808
MAP1LC3B2
PARK7
P2RX6
FAM220A
DNAJB13
LMAN2
GK5
FAM25E
FAM160B2
N4BP2L2
PDCD6IP
CCDC88A
QRICH1
NDUFA6
CNTRL
TMEM128
IREB2
C5
SPRING1
RNFT2
IL15RA
EPO
WDR74
SLC25A24
NRCAM
CYP17A1
BAIAP2
FAM207A
KCNH1
ODF3L2
PLAU
ZSCAN21
ATAD2
KRTAP10-9
LTN1
RABIF
RNF216
HTR3E
SAYSD1
SYS1
ZNF282
TMEM219
RBBP9
METTL25
CCDC59
KDM3A
RBM28
CYB561D1
RIF1
PRKCSH
CCDC151
NBEAL2
CCDC12
GLI1
TLR2
TMEM222
SUGCT
MPLKIP
HNRNPH1
DYNC2I1
MST1
SNAP29
PI4KA
PPP6R3
CWC22
TMEM229B
DHX8
VMAC
NDUFA11
OR2W3
PLEKHA6
SMARCD2
INO80C
WBP1
INO80B
ZNF3
GDPD5
ZBTB6
VAC14
GAGE2A
GBA
DCAF10
KLHL20
DHX40
BANP
SLC44A1
NECAP2
ZNF585A
DISP3
ACOX3
TRMT44
BMS1
MTR
TNFRSF1B
THOC3
DPH7
MAP2K1
SRP19
NR2C2AP
IPO4
WWOX
NPIPB9
PFDN5
MYG1
ERMN
TCAIM
HIC2
SMG8
DCLRE1B
AP4B1
ZNF385A
MRPS15
RPS18
MARCHF7
VPS52
TCTEX1D4
BTBD19
PLIN3
CNPY3
CEP192
RPL37
TMEM101
DHX16
IBA57
PRKCI
NEU1
DGCR8
PSMC3
MRPS18C
HELQ
TPM1
ZSCAN22
UFSP2
C4orf47
ZNF268
TMCC3
GUSB
CHMP4B
TUBB1
MATK
TTC38
PKDREJ
AASDH
ZNF212
BRPF1
RNF146
DBF4B
CAMK2G
PKD1
VARS1
DTX4
GIMAP8
HERPUD2
VPS13B
GRM4
TRIM5
TRIM22
KIF15
KIAA1143
POC1B-GALNT4
POC1B
GALNT4
KLHL18
KIF9
PHF12
AGBL3
DYNC2I2
CCNL2
KRTCAP3
DMAP1
RBIS
PPP1R8
EEF2K
LEMD2
SLC6A9
SPATC1L
FAM20B
PLEKHG2
H6PD
FNDC3A
THEM4
EIF3F
GTF2H5
NSUN4
TMBIM1
IPO13
PPOX
NUP210L
SEC61A2
RAB3GAP2
SPACA9
AK8
ADAM8
TSC2
NTHL1
AXDND1
ZNF714
CRTC1
YJU2
ZNF398
CASS4
ZNF425
PDRG1
DDX27
HTR4
RBM48
PEX1
N6AMT1
RRP9
PARP3
CACTIN
TP53I3
ZNF649
IRAK2
SEC22B
CDK5RAP1
ZNF391
NDUFS3
KBTBD4
PRPSAP1
C12orf73
VWA7
AK2
TFEB
ZDHHC12
ARVCF
ZNF561
SACM1L
TSSC4
DTWD2
COMMD4
TBCB
POLR2I
OVOL3
SLC45A3
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MRPS33
C19orf48
NOL8
CENPP
DLD
FRG2
PDE11A
RBM45
WDR70
PRMT3
PDE4A
CCDC124
TIMM50
RPL7L1
WDR4
IL18BP
STX4
CHMP4C
STRIP2
MRPL30
MITD1
ADPRS
TEKT2
HMGN4
PTPRF
DGCR6L
PDCL3
CBWD5
CBWD3
CBWD6
EPB41
SH2B1
VPS33A
RTL10
GNB1L
LEO1
ZNF558
POLR3B
TARBP2
MAP3K12
PMS2
AIMP2
TRIP4
DPY19L4
SNAP47
JMJD4
TMEM79
SMG5
INTS4
MEGF8
HDAC1
ARNT
CGB2
CGB1
RPL27
MRPL44
MMACHC
PMF1-BGLAP
PMF1
FUT10
TNXB
ZBTB40
TIPARP
KRR1
PSMB7
TAS1R1
NOL9
ZRANB2
BLOC1S5
TAF1C
ADAD2
MEF2A
SNX15
RNPS1
SKP2
LMBRD2
GLO1
RRP15
MCOLN1
SLC25A16
DGAT1
TENT2
BBS1
RAP1GAP
ZNF426
PPIH
RBSN
CCDC83
TTC21B
SPIDR
C1orf74
ERMAP
DDX50
B3GALNT2
SEC11A
ETFB
WNT11
COL23A1
NBN
MED18
SMG7
MTLN
DIDO1
GID8
C19orf53
NRBF2
BUB1B
NBPF10
FAM13A
TMEM107
STAM2
ZKSCAN8
HK1
ZNF684
ANKS6
SPPL3
ASB6
CCS
CCDC87
TNNI3
RNF121
LOC100133315
SWI5
GOLGA2
CSTF2T
CCDC88B
ZNF180
TTC39A
RPAP1
ZNF566
CCAR2
C8orf58
R3HCC1
TMED1
STAT6
RPA2
ZNF221
MAP2K7
RFX1
RPS10-NUDT3
RPS10
MTF2
ZNF846
UBQLN4
LAMTOR2
ZNF805
GNL3L
RHEB
SCAP
OR8G2P
C2CD5
TRIM41
TM2D1
NUP133
OPN1SW
FAM187A
EFTUD2
CCDC103
PDAP1
BUD31
METTL6
EAF1
TTC31
CCDC142
E2F6
MRNIP
WDR13
GSTM5
AFAP1L1
CASC3
POLR2J2
PCTP
RIPK1
PGLYRP4
MADCAM1
ADRM1
TIGD1
EIF4E2
LTA4H
TM9SF4
METTL26
MCRIP2
CSRNP2
RPF1
CFAP36
UQCRQ
GDF9
AKR1A1
OSBPL7
TMCC2
SECTM1
MGAT5
SNRNP35
GNA12
ZNF487
SPOCD1
HKDC1
SLC25A1
SCAND1
ATP5MC2
SEC13
AGK
ZNF510
RSPH3
DAXX
NFKBIL1
ATP6V1G2
HNRNPF
CDK7
DDX39B
ZNF565
ZNF146
ZBTB45
DPP9
CCNC
INKA2
DDX20
PLEKHM1
SRFBP1
FAM168A
BTNL10
MICOS13
HSD11B1L
BCAS2
CHFR
MON2
SEM1
CPPED1
DHTKD1
ZNF439
SLC35B1
PTCD1
CPSF4
SIRT5
DCP1A
PEX3
ADAT2
RPS14
WDR55
SLC39A13
RNASET2
MTOR
COG2
SMIM12
ERMARD
ZNF57
SSNA1
ANAPC2
ZNF442
FN3K
PNO1
HDGFL2
GTF2H2
TOR1AIP2
TOR1AIP1
ATR
ILF2
HACL1
BTD
CDK12
TPM4
ANKRD36
GFM1
THUMPD3
WDR62
THAP8
CPT2
MED16
PXMP4
TIMM13
CIBAR2
THEM6
RAN
TBC1D19
SLC29A2
BRF2
ZNF383
CCDC174
SREK1IP1
CWC27
BORCS6
FZR1
KXD1
GPX3
PPIP5K2
EMILIN1
PSMA1
MRPL38
ZZEF1
CYB5D2
SIKE1
MVB12A
RABGEF1
IFI6
ZNF576
IRGQ
STRIP1
NANOS3
ADO
GORAB
RAB8A
FAM228B
SF3B6
ZNF546
SIRT4
GYPC
NIP7
COG8
RRP1B
HSF2BP
NAPA
ATP5MF-PTCD1
ATP5MF
ABCF3
HACE1
TENT5B
SGO1
GRIPAP1
PRSS38
NR1H3
ACP2
SLC35A3
PLEKHM3
ABCC10
CYREN
ACVR1
DHDDS
ITGA7
MMUT
CENPQ
NQO2
ITSN1
CRYZL1
LMBR1
ZNF19
RDH5
IL18R1
POM121
BLOC1S1
GEMIN6
IGLL5
LPIN1
MRPL16
ATG4C
TMEM167B
POLR3A
RPS24
DR1
DFFB
CEP104
SMARCAD1
EXO1
TIMELESS
TEX15
ATG101
MACC1
CHCHD2
DGKH
NUDT5
CDC123
UNKL
PSPN
ALKBH7
INTS12
GSTCD
CFAP298-TCP10L
CFAP298
TTC4
TNFAIP8L1
CAMLG
RPL10A
ELAPOR2
HAUS5
CYB5B
TRMT10A
MTTP
SMIM30
ABCA3
CLPB
KSR1
EEF1AKNMT
BCAS4
NUFIP2
KPNB1
GPATCH3
EXOSC9
ZNF300
PNPLA8
SPATA24
WFDC3
DNTTIP1
POLR1H
CIZ1
UBE2Q1
PDSS2
MRPL27
EME1
USP47
GDPD1
UPK3BL1
ZNF197
TLE2
RPL36
BCL2L1
DNM1
DNAJC28
YBEY
MCM3AP
DNAJC16
CASP9
CCDC90B
CBLL1
CD2BP2
USE1
NDUFB2
SH3BGRL2
LCMT2
ADAL
FAM200A
CXCL6
SLC25A51
PPP1R11
C8orf37
HAX1
PUS10
PEX13
PLXDC1