ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX17826859 | 293
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◣ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

FRG2C
MTRNR2L8
MTRNR2L2
MSH3
DHFR
COL23A1
MED23
CCDC200
ITGB3BP
EFCAB7
DSTYK
MTF2
POLR2J3
NUF2
TXNIP
FRA10AC1
WDR11
TOR1AIP2
TOR1AIP1
MTRNR2L1
C18orf21
SEC13
NDUFS7
DCP1A
GOLGA3
FRG2
SF3A3
EIF2D
YARS1
S100PBP
DCAF10
INTS12
GSTCD
METTL9
SSBP1
TMEM222
KMT2A
CCNI
STX6
STAT3
MTRNR2L9
PRPSAP1
BSDC1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TOMM22
NDUFS3
KBTBD4
REXO4
ADAMTS13
GBA
NUP54
DNAJB12
MRPL39
ZSCAN30
SLC24A1
CASC3
LRRC59
RNF187
NME1
DHX40
SLC25A53
MRPL44
SMARCD2
TATDN3
NSL1
MUC3A
TTC4
TCF3
RPS7
AURKAIP1
BRWD1
GTF2H2
PIK3R3
SNAP47
JMJD4
TSNAX
DUX4
STX16
MRPS31
SPATC1L
AGK
NOC3L
CCT2
TMEM242
TARS3
RAD54L2
WDR74
IPO4
USP30
TRMO
EXD2
PIH1D2
NKAPD1
HMGB1
USPL1
SUPT7L
SLC4A1AP
DRAP1
C11orf68
ZNF76
LRP6
SLC44A1
DRG2
TVP23B
INO80C
FBXO28
MTERF4
STX18
EIF1AD
BANF1
NOTCH2
MRPL48
HEMK1
C3orf18
TTC26
PAXBP1
GOSR2
PEX3
ADAT2
BANP
IPO13
DR1
MCOLN1
FRAT1
BMS1
MRPL27
EME1
DPY19L4
UBC
FBXO22
RPL37
TUT1
DMAP1
ZMPSTE24
DEGS2
TOP3B
TACO1
CDON
FOXJ3
FLCN
THEM4
DTWD2
SELENOH
PLEKHM3
NSFL1C
GTF2H2C_2
GTF2H2C
AJUBA
MRPS23
TRDMT1
TMEM101
RPL5
SLC39A13
HDAC2
WASHC2A
PDAP1
BUD31
RBBP5
GTF3C3
MAML3
ZNF408
ARHGAP1
RWDD1
NUP205
DYNC2I1
PARK7
TMEM39B
SLC39A6
ELP2
POLR3B
UTP3
PSMF1
KANSL3
FER1L5
KAT6A
ZNF165
ZBTB45
PHIP
ATXN7L2
RPL38
NPAS4
TPR
ODR4
SLC35A3
FAM187A
EFTUD2
CCDC103
RPL27
PCDH9
SNX17
EIF2B4
ALKBH3
CCNC
CLN5
C21orf91
TARS2
SAR1B
GTF2H4
SOD2
WTAP
TAOK3
SUDS3
ZSCAN22
NOL12
SDHAF3
COX16
PRPF18
TBPL1
ZNF397
TTC28
IBA57
UROS
BCCIP
GFI1B
TSC1
FAM207A
KCTD9
CDCA2
TTLL12
TBC1D19
TIGD1
EIF4E2
ABCA3
VPS25
C12orf73
TEFM
PSTK
SMG7
SUMF1
PET117
KAT14
LUC7L
HSPE1-MOB4
HSPE1
HSPD1
C10orf88
ZNF24
CZIB
KRBA1
NR1H3
ACP2
HDAC8
PNPLA6
MFF
YTHDF2
ALKBH5
CCDC97
PTDSS1
MTERF3
PSD
FBXL15
GPR180
ARRDC4
WDR70
MRPL21
IGHMBP2
WASHC2C
MAPRE2
ATG101
CCNG2
EIF3D
COG2
MAN2C1
VPS13B
MRPL30
MITD1
ZNF296
GEMIN7
NR1H2
MTIF2
THOC3
WBP1
INO80B
MRPS15
KCTD5
PDCD6IP
MAPK1IP1L
SPNS1
LRRC37A3
TXN2
CYP51A1
METTL25
CCDC59
POLE4
MKRN2OS
MKRN2
LMAN2
TBC1D13
CHD1L
PRKAB2
FEM1B
CDK19
AMD1
NUB1
FRG1
DDX1
CALM2
ZNF48
MYLPF
SEPTIN1
SLC33A1
UBE3B
KCTD10
ATR
NBN
BCL9
SNRPD1
SETD1A
TM2D1
TM2D3
N6AMT1
ZNF576
IRGQ
L3HYPDH
JKAMP
DISP3
SCAND1
SNRPE
COA6
RRP15
INTS5
STOML2
THG1L
GTF2IRD2
GTF2IRD2B
MRPS7
GGA3
HLCS
HUS1
BRPF1
MRPS33
GALR1
PRMT2
ATF7-NPFF
ATF7
ECSIT
DISC1
ACBD3
RUVBL1
EEFSEC
PRSS38
CDK5RAP1
RPS20
ZNF212
RFXANK
BORCS8-MEF2B
BORCS8
FMNL3
COMMD6
ZNF862
MRPL40
HIRA
NCBP3
ARHGEF1
RAB11A
CSNK1D
CLK3
TSC2
NTHL1
KLHL20
MIER1
MTERF1
SIKE1
DNAI4
DOCK7
GHITM
NSF
GORASP2
SNRPD3
GUCD1
CCDC88A
ERMARD
AAR2
SPDYE14
SPDYE10P
CASTOR2
ZNF219
TMEM253
HEXA
DDX59
VPS37B
TOM1
GPAM
NOP16
HIGD2A
BBS1
ALG10B
ARMH3
MSANTD2
SLC39A3
ZER1
TRIAP1
DCXR
PBX3
WDR36
AKAP10
FZD1
NLE1
RSPH3
ZNF444
SUGCT
MPLKIP
SIRT6
ANKRD24
VAMP4
STARD10
CBX1
TRIP4
RNF125
TNPO3
DCP1B
SAYSD1
PTPN21
ARL8B
VTA1
NMBR
UNC13B
BIRC5
NCDN
KIAA0319L
ENSA
DNAJC11
TRAF6
RAG1
PDXDC1
PAFAH2
PDE4DIP
APOA1
SNRPB2
CLPB
MTPN
LUZP6
UCHL3
TRNAU1AP
TXLNA
GTF3C5
BRF2
TIGD6
HMGXB3
SS18
NDUFB3
FAM126B
MOB4
C17orf75
COIL
IMPACT
TMEM41A
AARS2
RBM28
ZNF790
AHI1
MIS12
DERL2
MED4
RBL1
NUDCD3
ESCO1
MRPS36
SRCAP
LOC730183
YY1AP1
DAP3
CTNNB1
HNRNPA1L2
GFM1
ABCB10
PHACTR4
CIAO3
CLTC
NOXA1
POLG
PRKRA
PJVK
SMG8
U2SURP
RABGGTA
VDAC2
PTS
ZNF609
ITGB1BP1
CPSF3
TCAIM
MRPL11
OTUD7B
PLS1
MBTPS2
SLF2
RPS4X
TBCK
AIMP1
ATAD2
CENPN
CIC
BNIP1
PRMT3
CYREN
UTP11
MFSD14A
ZNF326
TMEM39A
RABIF
ZNF23
HCFC2
GLT8D2
SCGB1C2
SCGB1C1
GOSR1
WDHD1
SOCS4
SEC11A
INO80
KRR1
TAF3
SCYL3
RBFOX2
RPEL1
NEK2
PIGO
ZFYVE27
PPP6R1
ZNF391
PFKM
SENP1
SLC25A28
DNAJC28
ACAT2
TSFM
MRPL16
SERBP1
PSMG1
CBWD1
LRCH4
FBXO24
SNX16
RABGAP1
GABPB2
ZCCHC4
MTR
NBPF1
SH3GLB1
TCP11L2
TFAM
VMAC
NDUFA11
KIAA1958
C9orf147
RCOR1
ATG4C
STMP1
DHX8
ZNF518A
DNAJC9
ARMC8
ZNF561
COPS7B
DDX18
PDE6D
VPS72
NDUFB7
HAGH
FAHD1
MRPL3
SACM1L
ASNS
MRPL42
STX4
ATP5MC2
MYCBP2
MOB3A
IZUMO4
FOS
ZBTB40
SRP9
TAF12
EFCAB2
MPI
ATP5IF1
SNRPB
ZNF335
PEMT
ARL4A
DNLZ
MIS18A
BZW1
IGSF9
SELENOW
PDE4A
SMN2
SMN1
GTF2H3
EIF2B1
FBXW8
STX7
NFAT5
TSPAN10
NPLOC4
NDUFC2-KCTD14
NDUFC2
ANKRD13C
PRR14
NCSTN
COPA
LOC112694756
HOOK1
LUC7L2
FMC1-LUC7L2
FMC1
NECAP2
SRI
B4GALT3
RPL31
GPATCH3
CCDC43
THNSL1
CD164
COMMD2
EDC4
UFSP2
C4orf47
SRP68
GALR2
TRUB2
COQ4
RMDN2
CCAR2
C8orf58
DCTN4
C2orf42
STT3B
HDAC4
GALK2
PSMD6
COPS2
RPS3A
ACBD6
ZC3H6
NUP133
CHPF2
KAT7
ZNF2
ABCF2-H2BE1
ABCF2
DENND6A
PTTG1IP
BLOC1S2
HDAC1
MRPL55
EXO1
GTPBP4
MRPS18C
HELQ
ARID3B
SF3A1
CCDC157
MARCHF8
SLMAP
MRPS5
TCP11L1
ZNF396
DAZAP2
HTR5A
ADPRS
TEKT2
MRPL58
TIMM23
EIF3G
CRNKL1
CFAP61
USP35
KCTD21
RBM34
ACTR8
IFNGR1
TIGD5
EEF1D
PEPD
CDC73
DHRS13
SPECC1
XPNPEP3
ST13
DNAJB7
STARD3
CHMP3
RAB18
ATP5MPL
PGBD2
MDM4
THUMPD1
RPAP3
NCAM1
KDM3A
KLHL12
VPS36
CKAP2
AP5S1
RPS14
MAIP1
RIF1
INTS2
CCDC15
PPIP5K2
CCDC107
S100A13
GIT2
ANKRD13A
XPA
LRRFIP2
PRPF40A
ARL6IP6
VANGL2
CHTOP
STK38L
C1orf232
ZNF593
ZNF3
DCT
GARS1
CSTF2T
ANKRD36C
CMTR2
RWDD3
RPAP2
GLMN
GSPT1
NMNAT1
LZIC
CHEK1
RPS6
ZBTB17
XRCC2
OPA1
ARHGEF12
HINT3
C7orf25
CATSPERE
GUSB
HNRNPH1
ZNF461
RPS12
NCOA5
ZNF398
ZNF425
STAM2
LAMP1
VPS33A
REX1BD
MGAT1
VPS16
PCED1A
WASF1
CDC40
ANO5
C1GALT1C1
ROR1
TSSC4
PSMC2
DNAJC2
RAMAC
RAB39B
CBWD5
CBWD3
HNRNPD
MTBP
MRPL13
CBWD6
MRPS14
GNB2
ELAVL3
ZSWIM7
TTC19
NDFIP2
EIF4A3
CREM
RBSN
ZNRF4
HIPK1
YWHAE
MYL12B
RNF138
TTLL7
HYAL2
BCAR3
PUM1
ZKSCAN2
TMEM230
ZNF180
MYH7B
GSS
BDP1
SEC22B
TMEM167B
AP1G1
MAP3K2
LATS1
RBM17
CACTIN
NDUFA10
OR6B2
TRIP10
EIF3B
ZCCHC9
GPR108
CPLX2
MTMR9
RBM39
ZBTB37
ESYT2
ASH1L
MRPL38
TOX4
RAB2B
DUS3L
TSG101
TBC1D4
SLC2A12
TPK1
PSMD3
NBPF15
MRTO4
EMC1
RNF32
SLC25A5
FAM227B
DTWD1
TMBIM6
AIFM1
NET1
CYCS
ANGEL2
TXNDC17
KIAA0753
TUBD1
RPS6KB1
NAGPA
TTC13
ARV1
ANKRD36
PRKAR1A
CPEB4
MIA2
AKAP1
GLUL
CENPBD1
TRIM16
RTTN
GBE1
LRRC49
THAP10
STK25
DNAH14
TAF1B
GOPC
C12orf66
ZFP30
EIF2S2
HOMER1
ZNF473
VRK3
SPC24
FAM228B
SF3B6
ADPGK
SNRNP70
IFRD2
ZMYM1
LETMD1
ABRAXAS1
SLC37A3
FUS
ZMYND10
NPRL2
CYB561D2
RGS9
TTI1
RPRD1B
NDUFB1
CPSF2
WWOX
PCBP2
CSDE1
TMEM128
PIGK
RUSF1
STAMBPL1
HSPA9
LMBR1
IL10RA
DUS1L
RARS1
GPR84
MTHFS
HMGCL
CASZ1
RTL8C
PDE11A
RBM45
GOT2
EXOC2
TMEM106B
GTF3C6
TMEM131
SMC3
RPL11
KMT5B
DHDDS
VPS45
MED11
ALG9
BRMS1L
SPAG16
TANGO6
ZNF627
MAPK8
UBE3C
ZNF70
VPREB3
RABGAP1L
CLUAP1
MEMO1
ZNF556
C16orf90
TXNDC9
EIF5B
ZNF564
FAM120B
DIMT1
MRPL37
CYB5RL
HBS1L
YIPF2
TIMM29
CCDC124
C6orf226
ZSCAN32
ZNF174
P4HA1
FUCA2
RBM14-RBM4
RBM14
DKK1
TMBIM4
SRSF11
GLIPR1L1
CAPS2
LRRC40
BAZ2A
ATG9B
ABCB8
RIOK1
CAGE1
TARBP2
MAP3K12
GPHN
WDR26
FBXO31
MRPL1
DPP9
SLC35B1
MARCHF7
RAB5IF
ZNF555
EGLN1
THBS4
MTX3
ZNF429
DCLRE1B
AP4B1
MAGOH
PPP1R8
DAB1
OMA1
CNPY3
STARD4
QTRT2
CCDC191
BAX
PKNOX1
ANKRD46
ADGRL1
IQCH
AAGAB
INVS
ERP44
MAP3K3
DGAT2
C2orf49
BORCS7
TIAL1
DOHH
LYRM4
FARS2
KMT2D
GDAP1
TTC37
ARSK
CDC25C
FAM53C