ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX12813813 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◣ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

FRG2C
CCDC200
FRG2
SNX16
WDR74
MUC3A
DUX4
KRBA1
COL23A1
PCNP
SMCO1
RNF169
KCNJ15
THEM4
MTRNR2L1
RPL10L
FAM209A
UBB
GAPDH
DSE
TSPYL4
DNAJB14
H2AZ1
OSGIN1
CYBRD1
RPS14
GSTM5
SCCPDH
TUBA1B
IL21R
MON2
KMT2A
RPS27A
CLHC1
TPTEP2-CSNK1E
PRRT1B
C3orf14
IL36A
RPL26
RPL30
ST20-MTHFS
GSTM1
LEP
ACAA2
TTLL12
PSMD6
IGFALS
ANP32D
ST6GALNAC6
MTRNR2L2
MSH3
DHFR
MYL6
DEGS2
PNPLA7
TATDN2
ZFP37
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
PARL
TXNRD2
RUNDC3B
UBE2F
SEC23B
USP17L20
USP17L22
SERHL2
FAM227B
DTWD1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
CEP41
ARHGAP39
FAM184A
HEATR6
PDCD7
MUC12
SKP2
LMBRD2
CYP4F8
STMN3
RTEL1
NKIRAS1
RPL15
PUS7
TUBA1A
ZNF641
MYO5A
ANKRD54
EIF3L
KRTAP10-9
TNS2
SYPL1
ZNF217
AFG3L2
PDE11A
GNMT
BMP7
BANP
ZNF572
SCGB1C2
SCGB1C1
ARFGEF2
EFCAB10
PLCG1
ACOX3
TRMT44
ZFP1
CCDC130
NUDT4B
NUDT4
IRAK2
FZD1
PPP1R9A
DVL3
C2orf88
EIF5A2
PPP1R3E
BCL2L2-PABPN1
BCL2L2
GAS2L3
H3-3B
LONRF2
GRM4
STX16
KAT6B
XXYLT1
SATB1
PARP15
SFTA2
ZNF317
APOL4
TARS3
FBRS
CERS2
EPS8
PFDN4
DNAJB12
ZNF282
ZNF324B
PPM1D
CLDN18
DMXL2
TMEM229B
BAAT
PRELID3B
OR2AP1
DPY19L4
MAD1L1
SLC7A5
EFCAB13
CFAP43
CUL1
SLC25A48
PLD4
LRP12
MAPK6
CALCB
IQSEC3
HSPA8
MUC1
TRIM37
FLT3LG
ATXN7
MAN1A2
ACAP2
TNFRSF11A
CRY1
FAM217B
SYCP2
PAXIP1
CLK4
THOC3
ELOVL2
DOCK7
LPIN2
CADPS
PRSS38
HYAL1
NAT8
TMEM65
RANBP17
NEDD9
DSTYK
ITPK1
LSS
CD14
IL36RN
IL36B
TCTN3
SAYSD1
PARD6B
SLC27A5
MIS18BP1
ATXN7L1
ZMYND8
DNAJB1
TARM1
RBPJ
SYNM
SAMD4A
PDE8A
ACSF3
PTPA
CRAT
NR2C2AP
C20orf204
CACNG1
GMFB
PLEKHA1
LYSMD2
SLC26A4
CEP72
RSRC1
SHOX2
FBXL5
FBXL18
CTAG1B
CTAG1A
ANKRD36C
DTD2
CAPN7
BCAP29
BAIAP2L1
SNCG
MMRN2
BFSP1
BCAS2
TPM1
PARP16
PAG1
TBX2
TMEM41A
CAMK2D
RASL11B
FAM91A1
CYP17A1
BCAR1
HEATR4
CPLX2
IMPA2
GABPB1
TRIM33
SNIP1
DNALI1
SESN1
CEP57L1
WIZ
CCDC149
CCDC74A
ARL2
FN3K
CSF1
METTL8
DCAF17
HOMER1
CAPN5
MYBPC3
ELK4
SOGA1
KRTDAP
SFT2D3
DNASE2
KLF1
TUBD1
RPS6KB1
PCDHB10
PCDHB11
RNGTT
MROH7
PSEN1
CPPED1
SERBP1
NOXO1
GFER
TERF1
VPS13B
SRI
TTC30A
SKOR2
TADA3
ARPC4-TTLL3
ARPC4
P3H4
FKBP10
INPP5A
ITGB1BP1
CPSF3
ATP1A1
BCAS4
GTF2IRD2
GTF2IRD2B
DGKE
C17orf67
PRKAR2B
MYL12B
USP32
PREX1
PRKCZ
ZFPM1
TM9SF3
ADORA2B
NIN
FAM110B
TTC39C
SH3YL1
TMX4
YPEL3
MAMDC2
AADACL4
BSDC1
MBOAT4
TMEM89
ZNF562
EXTL2
MTRNR2L8
ITGB3BP
EFCAB7
DUSP6
GBA
FAM153B
DBNDD2
GORASP2
SARS2
MRPS12
RABGAP1
TBX6
CBX1
FEM1C
APOA1
NUF2
COL18A1
PAXBP1
RBBP5
APOBEC3B
MTF2
RPS7
BCAR3
BCR
SSBP1
ZNF761
DMAP1
AURKAIP1
SUMO3
OR4K17
LUC7L2
FMC1-LUC7L2
FMC1
TLR2
SAMD4B
SF3A3
PUM1
GPRC5C
ACYP2
RFC1
MED23
FAAH
NDUFS7
NME1
SDR42E1
SLC1A7
CEP85
COX16
ADCY10
RPS29
DCP1A
PEX3
ADAT2
RAB37
SEM1
EIF2D
INTS12
GSTCD
ZNF117
YWHAQ
ZNF623
TMEM242
RPL27
ZMPSTE24
FRA10AC1
TMEM70
ELOC
PPIG
GPD1L
DCAF10
RBM33
IFT88
JMJD1C
PLEC
MRPL44
ZNFX1
MAPRE2
GDPGP1
CIB1
POLE4
SULT1C3
ZNF577
HMGB1
NDUFB3
FAM126B
NOS3
RABGAP1L
TTC32
NPAS4
CALD1
USPL1
C19orf18
HERPUD2
NARF
TBC1D19
TRIP4
POLR2J3
ZNF426
ZFP30
GTF2H2
STX18
TMEM43
CHCHD4
SELENOH
CFHR4
TOP3B
SLC24A1
ENG
TMEM14C
RPL37
DRG2
TOR1AIP2
TOR1AIP1
ZSCAN31
SMARCD2
COMMD2
GALNT1
ADI1
SLC33A1
PAFAH2
DNAJC25-GNG10
DNAJC25
NSFL1C
TARS2
MRPS31
ZNF561
POLR3B
PPIP5K2
ZNF792
TMEM62
RBBP9
LIPA
NME4
GSTA4
METTL25
CCDC59
ZNF408
ARHGAP1
ALG10B
TFPT
PRPF31
YTHDC2
TATDN3
NSL1
CYBC1
RERE
KDM3A
CLDN16
UTP3
SLC44A1
SLC25A51
CAT
TDP2
ACOT13
GTF3C3
FRG1
IPO4
ZNF134
LMLN2
SLC41A3
REEP3
TIGD2
PIK3R1
RAD54L2
EIF3F
GTF2H4
INTS5
VTA1
NMBR
TMEM68
TGS1
ATF7IP2
YY1AP1
DAP3
SMG8
AUH
THAP11
NUTF2
LSG1
GTF2H2C_2
GTF2H2C
ZNF341
SUPT7L
SLC4A1AP
CATIP
YJU2
CENPT
ACTL8
ZNF32
MRPL40
HIRA
GOLM2
FBXO31
HTR5A
BAIAP2
RPL11
STAT3
ITGA4
TMEM44
CAMK1D
REXO4
ADAMTS13
PDE4DIP
RTTN
INO80C
PPP6R1
KDM1A
WDR36
SEC22B
TEFM
GCNT3
EIF1AD
BANF1
GLO1
FGD3
MSRA
BMS1
DRAP1
C11orf68
ZNF841
CDK5RAP1
TACO1
GINS1
RNF187
ZNF829
ZNF568
PPP1R11
MMACHC
LCN8
RILP
SNAP47
NEMF
SCAND1
PRIM2
PSMF1
ESR2
ATR
USP30
THOC5
COPS7B
ORC4
MBD5
NBN
SLC2A7
FAM207A
SNX17
EIF2B4
REN
DEK
MTERF4
MRPL21
IGHMBP2
SCMH1
CCSER2
JMJD4
HSD17B6
SGCE
PEG10
TRUB2
COQ4
ZNF391
ZBTB45
WDR11
TMEM222
ILF2
LARP1
MTRNR2L9
FGFBP3
CCDC97
ATP5MC2
KANSL3
FER1L5
POLR3E
SLC29A2
SUPT6H
SDF2
ZNF540
DUS1L
TTC26
SAR1B
MOB4
C1orf167
MRPS18C
HELQ
FAM133B
MRPL1
ZNF571
HSPE1-MOB4
HSPE1
HSPD1
WDR43
AKAP10
RMND1
ARMT1
DPP9
KLHL20
BNIP1
SPAAR
MRPS23
GALK2
ZNF226
C17orf75
NRBP2
IST1
LGR5
MTIF2
ZBTB40
SCNM1
LYSMD1
CLTB
GTPBP3
CD47
ANO8
MMP7
KIAA1549
GFM2
ATP9B
NFE2L3
OAZ3
TUT1
GABPB2
COLEC11
DUSP16
CANT1
ZNF609
HACL1
BTD
WDR55
C16orf54
COPS4
DDX18
CTNNB1
SMIM31
FASTKD1
TEX46
TMEM79
SMG5
CHD1L
GASK1A
SEC13
EXO5
GTF3C5
ZCCHC4
SNRPB
ANXA2
BRWD1
MRPL48
MAIP1
RUVBL1
C1GALT1C1L
POLG
GRPEL2
NDUFS3
KBTBD4
NR1H3
ACP2
NCOA7
OTUD7A
ATF7IP
TTI2
RPS20
NUP54
RMDN2
RAB30
ZNF566
MLEC
CBWD5
TPR
ODR4
ZSCAN25
C18orf21
STAU1
LZTR1
MAN2C1
OPA1
FBXL12
CFAP298-TCP10L
CFAP298
NOTCH2
CASP4
TMEM114
MRPL30
MITD1
RTCA
ARID1A
DCLRE1B
AP4B1
C8orf37
CCNC
PIN4
DGKZ
AFAP1L1
ADNP
GPAM
CBWD3
TMEM101
TTC4
MNAT1
PRPF18
FAM228B
SLC45A4
GOLGA5
B4GALT7
KLRD1
ADRM1
SLTM
KLHDC9
CCAR2
C8orf58
H4C8
ANK3
PCP4L1
TMBIM4
BCL9
TSGA10
NOP16
HIGD2A
ADPRS
METTL9
SLC39A13
TLNRD1
HNRNPD
EPRS1
CLDN4
EIF3E
RNASET2
TPK1
SF3B6
CCDC150
COX7A2
GMPS
TMX2
MED19
PSRC1
PDE6D
TEKT2
ZNF398
CDYL
MTBP
MRPL13
CCNI
SUGCT
MPLKIP
SDHAF3
BRF2
TSFM
ADAR
SLC38A9
SLC35A3
PSMD3
SRRM3
HUS1
LOC102724265
IAH1
CASC3
MATK
CCNT1
INPP5F
POLR1H
ALKBH3
ING2
COPS2
MED18
PHIP
TIPARP
REM1
DEFB124
PIGW
MYO19
PARP2
UBLCP1
TRIM38
FABP6
NAA20
CENPV
SMU1
NCBP3
SNRPD1
RANBP1
AGK
SLC35E2A
CRKL
CDC73
PPP5D1
CALM3
ZNF772
TGFBR2
TTLL1
MRPL34
MRPL3
LRRC37A3
CLUAP1
GFI1B
SNRPB2
MTR
PLEKHM3
PRDX3
KRTAP10-8
TRMT2A
ZNF292
NFAT5
SMG7
SRSF7
SPSB1
NECAP2
TIMM22
KAT6A
N4BP2L2
VIRMA
WWOX
SACM1L
CCR6
FAM98B
MTOR
CNOT3
TRMT5
SLC38A6
LNPEP
AARS2
ZNF165
CBWD6
ZNF280D
RBM45
RAB18
RPL26L1
TTC13
PRKAB2
ARV1
TTC5
CDK19
AMD1
HAX1
ZSCAN30
SNRPE
ZNF438
TIGD1
EIF4E2
ZNF76
TEX50
PPIAL4F
PPIAL4E
PPIAL4D
WWTR1
PIP4P2
MAGOH
CLTC
R3HCC1
TMED1
PDCD6IP
LRIG2
CASP10
LRP6
FBXO38
COA6
RNF125
RPS15
MYCBP2
FOXN1
C2orf15
RBM28
ACSM2B
PIH1D2
NKAPD1
STOML2
CADM2
PUS10
PRRC1
PEX13
MRPS14
U2SURP
ZNF554
ALG10
PRKAG2
WBP1
INO80B
NBPF1
TEX9
RFX7
H4C12
LSM5
TIAM1
HIP1
ANKRD40
C10orf88
ZSCAN22
CALCRL
CEP120
DHRS2
AAR2
KMT2D
RPL5
STX6
MSL2
LPIN1
DLAT
MRPL16
SMIM13
TBCK
AIMP1
SUGT1
RCHY1
GSPT1
AVL9
CEP85L
CCDC88A
DDX1
POM121L2
NOXA1
MRPL39
ARRDC2
GABPA
ATP5PF
HLA-E
CASS4
CLUL1
NMNAT1
LZIC
RNF6
TMEM42
PPP2R5B
NDFIP1
FAM234A
MAPK1IP1L
KRR1
DHX16
MFF
ZZZ3
PRMT5
MEMO1
GCNT1
WDFY1
ITGAL
ATG101
PFKM
SNRPD3
GUCD1
SRP9
H4C11
MRPS33
PCBP2
SLC35E2B
ZNF425
YTHDF2
CREM
ABHD11
EPB41
ABCC10
ZNF512B
PTPN4
ZNF385A
SEL1L
ZNF546
SEC14L1
FBXO22
RESF1
TRAM1
GNB2
RRP15
CDIPT
CNN2
HNRNPA1L2
RPS19
GLIPR1L2
SGMS2
PDRG1
DHTKD1
SOD2
NUP107
ELAVL3
SLC35G5
MRPL19
C2CD5
PRPSAP1
MED4
TSC1
MTMR6
MAP1LC3B2
RPS3A