ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX150543 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◣ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

LDHD
ZNF572
CCDC200
TATDN2
SUMO3
GORASP2
AADACL4
IL36A
RBM33
C1orf167
MAMDC2
KRBA1
AQP10
BCR
TMEM89
THEM4
IL21R
TXNRD2
IRAK2
ZNF32
FAM184A
ZNF623
YPEL3
TBX6
WDR74
SNCG
MMRN2
YY1AP1
DAP3
DKKL1
DBNDD2
COL18A1
MROH7
LONRF2
MON2
GSTM5
KCNJ15
PPIG
MAP1LC3B2
MBOAT4
UBE2F
TMEM44
POM121L2
PRRT1B
ARHGAP39
CEP85
AFAP1L1
FAM209A
ENG
ZNFX1
H4C8
LEP
ZNF562
APOL4
SLC27A5
ZNF263
MTRNR2L8
SLC1A7
ZNF317
RBPJ
ADCY10
ADI1
BAAT
ZNF761
IGFALS
EXTL2
GPRC5C
TDP2
ACOT13
SARS2
MRPS12
TMEM62
ZFP69
GRAMD4
FAAH
RNGTT
TRIM32
ASTN2
CACNG1
NOS3
CATSPERE
SYT3
CTAG1B
CTAG1A
BSDC1
LOC102724265
RTCA
MTRNR2L2
MSH3
DHFR
ZNF341
TNXB
C4B_2
C4B
GOLGA5
ZNF426
OPN1SW
HERPUD2
BCL7B
LCN8
EHHADH
LZTR1
CDYL
CFAP43
SCCPDH
S100A5
S100A4
S100A3
FEM1C
ADAR
APOL1
ATXN2L
DLK2
GAL3ST2
HEATR4
OR4K17
ZNF577
ANKFY1
ZNF57
LRRC61
ACTR3C
EFCAB10
PRSS38
DGKH
DUX4
ZNF780B
DEGS2
LOC110384692
C4A
MSRA
HSD17B6
ZSCAN31
C19orf18
FBXO8
CEP44
AGGF1
GUCA1B
ELFN1
IFT88
KRTAP10-9
AUH
ZNF438
CATIP
RABGAP1
RIC8B
NDUFS4
HYAL1
TRANK1
SPDEF
SPATA45
BCL7A
ZNF683
CYP17A1
ESR2
MATK
PPP5D1
CALM3
FAM227B
DTWD1
GAS2L3
EPHX2
GATAD1
UBAP2L
C1orf43
ZNF324B
ZNF669
KAT6A
APOBEC3B
SPSB1
ZNF439
GLO1
AIFM2
ACAA2
PSEN1
BANP
KDM3A
ST20-MTHFS
ACSM2B
PDRG1
C2orf88
TOP3B
PDE7A
C9orf153
L2HGDH
DMAC2L
SAMD1
CDCP1
TRIM48
CAB39L
FN3K
PLVAP
ZNF398
TRIM38
ZNF425
GTDC1
ADA
EPS15L1
LARP1
SMIM31
C1orf158
SNIP1
DNALI1
TMEM35A
FAT1
ST6GALNAC6
PARP15
SLC35G5
NDUFA8
MORN5
PDCD7
OSBPL8
CUL2
PPARGC1B
RBBP5
REN
TMEM42
LRRC34
CCR7
TMEM9
AADAC
MRPL34
ABHD8
MUC3A
ANP32D
OXA1L
DEK
TAAR9
TLCD4
NUDT9
TLR2
ACOX3
TRMT44
SWAP70
CCDC130
SDR42E1
ZNF211
TMEM107
AACS
LY6H
RSAD2
HDAC9
ERAL1
TNK1
RFC1
POLR2E
GPX4
ACYP2
MID1
DDX19B
HDLBP
POLE4
C1orf159
TIGD2
PTGS1
SSH1
SEC14L1
CNOT11
HSFX4
NME4
SLC35E2A
CEACAM21
PAFAH2
SMCO1
RGPD2
RGPD1
CCDC181
APOL3
NUP210L
ASS1
HTR3E
COL23A1
ZMYM6
JAGN1
VBP1
CD200R1L
LUC7L2
CEP72
ACTL8
PCP4L1
PDE6G
EPO
SEM1
SPAAR
RBM28
ZFP1
PACS1
SOAT2
OR2W3
FBXO17
UBLCP1
ZC3H10
RPL41
ZNF816-ZNF321P
ZNF816
ANKRD54
EIF3L
HIP1
TMPRSS12
SEL1L
ERICH3
GPAM
SAP130
C1RL
FANCL
FOXN2
SAR1A
SRL
NT5DC1
INSL6
FMC1-LUC7L2
FMC1
RSL24D1
ADAP1
YTHDC2
PDE2A
CABIN1
GSTT4
WRN
RAB40B
P2RX6
YBEY
MCM3AP
FRG2C
FRG2
MTRNR2L1
SNX16
ITGB3BP
EFCAB7
DUSP6
GBA
FAM153B
PDE11A
CBX1
TMEM229B
APOA1
NUF2
PAXBP1
MTF2
RPS7
BCAR3
SSBP1
STX16
DMAP1
NOTCH2NLC
AURKAIP1
NOTCH2NLB
NOTCH2NLA
SAMD4B
SF3A3
PUM1
MED23
NDUFS7
NME1
COX16
TTLL12
RPS29
DCP1A
PEX3
ADAT2
TMEM41A
RAB37
EIF2D
KMT2A
INTS12
GSTCD
ZNF117
YWHAQ
TMEM242
SATB1
CALCB
RPL27
ZMPSTE24
FRA10AC1
TMEM70
ELOC
GPD1L
DCAF10
JMJD1C
PLEC
MRPL44
MAPRE2
GDPGP1
CIB1
SULT1C3
HMGB1
NDUFB3
FAM126B
DSTYK
RABGAP1L
TTC32
NPAS4
CALD1
USPL1
SKP2
LMBRD2
NARF
TBC1D19
TRIP4
POLR2J3
ZFP30
GTF2H2
CLK4
STX18
TMEM43
CHCHD4
SELENOH
CFHR4
PNPLA7
SLC24A1
DPY19L4
PRELID3B
TMEM14C
ATP1A1
RPL37
DRG2
TOR1AIP2
TOR1AIP1
SMARCD2
SCGB1C2
SCGB1C1
COMMD2
GALNT1
SLC33A1
DNAJC25-GNG10
DNAJC25
NSFL1C
TARS2
MRPS31
ZNF561
POLR3B
PPIP5K2
ZNF792
RBBP9
RPS14
LIPA
GSTA4
METTL25
CCDC59
ZNF408
ARHGAP1
ALG10B
TFPT
PRPF31
TATDN3
NSL1
CYBC1
RERE
CLDN16
UTP3
SLC44A1
SLC25A51
DNAJB12
CAT
MAD1L1
GTF3C3
FRG1
IPO4
ZNF134
LMLN2
SFT2D3
SLC41A3
REEP3
PIK3R1
RAD54L2
EIF3F
GTF2H4
INTS5
VTA1
NMBR
TMEM68
TGS1
EPS8
ATF7IP2
SMG8
THAP11
NUTF2
LSG1
GTF2H2C_2
GTF2H2C
SUPT7L
SLC4A1AP
YJU2
CENPT
MRPL40
HIRA
GOLM2
FBXO31
HTR5A
BAIAP2
RPL11
STAT3
ITGA4
CAMK1D
REXO4
ADAMTS13
PDE4DIP
RTTN
INO80C
PPP6R1
KDM1A
WDR36
SEC22B
TEFM
GCNT3
EIF1AD
BANF1
FGD3
BMS1
DRAP1
C11orf68
ZNF841
C3orf14
CDK5RAP1
TACO1
GINS1
RNF187
ZNF829
ZNF568
PPP1R11
MMACHC
RILP
SNAP47
NEMF
SCAND1
PRIM2
PSMF1
ATR
USP30
THOC5
COPS7B
ORC4
MBD5
NBN
SLC2A7
FAM207A
SNX17
EIF2B4
MTERF4
MRPL21
IGHMBP2
SCMH1
CCSER2
JMJD4
SGCE
PEG10
TRUB2
COQ4
ZNF391
ZBTB45
WDR11
TMEM222
ILF2
MTRNR2L9
FGFBP3
CCDC97
ATP5MC2
KANSL3
FER1L5
POLR3E
SLC29A2
SUPT6H
SDF2
ZNF540
DUS1L
TTC26
SAR1B
MOB4
MRPS18C
HELQ
METTL8
DCAF17
FAM133B
MRPL1
ZNF571
LSS
HSPE1-MOB4
HSPE1
HSPD1
WDR43
AKAP10
SAMD4A
RMND1
ARMT1
DPP9
KLHL20
BNIP1
MRPS23
GALK2
ZNF226
C17orf75
NRBP2
IST1
LGR5
MTIF2
ZBTB40
SCNM1
LYSMD1
CLTB
GTPBP3
CD47
ANO8
MMP7
KIAA1549
GFM2
CPPED1
ATP9B
NFE2L3
OAZ3
TUT1
GABPB2
COLEC11
DUSP16
CANT1
ZNF609
HACL1
BTD
WDR55
C16orf54
COPS4
DDX18
CTNNB1
FASTKD1
TEX46
TMEM79
SMG5
CHD1L
GASK1A
SEC13
EXO5
GTF3C5
ZCCHC4
SNRPB
ANXA2
BRWD1
MRPL48
MAIP1
RUVBL1
C1GALT1C1L
POLG
GRPEL2
NDUFS3
KBTBD4
NR1H3
ACP2
NCOA7
OTUD7A
SERHL2
ATF7IP
TTI2
RPS20
NUP54
RMDN2
RAB30
ZNF566
MLEC
CBWD5
TPR
ODR4
ZSCAN25
C18orf21
STAU1
MAN2C1
OPA1
FBXL12
CFAP298-TCP10L
CFAP298
NOTCH2
CASP4
TMEM114
MRPL30
MITD1
ARID1A
TPM1
DCLRE1B
AP4B1
C8orf37
CCNC
PIN4
DGKZ
ADNP
CD14
CBWD3
TMEM101
TTC4
MNAT1
PRPF18
FAM228B
SLC45A4
B4GALT7
KLRD1
ADRM1
SLTM
KLHDC9
CCAR2
C8orf58
ANK3
TMBIM4
BCL9
TSGA10
NOP16
HIGD2A
ADPRS
METTL9
SLC39A13
TLNRD1
HNRNPD
EPRS1
CLDN4
EIF3E
RNASET2
TPK1
SF3B6
CCDC150
COX7A2
GMPS
TMX2
MED19
PSRC1
PDE6D
TEKT2
PSMD6
MTBP
MRPL13
CCNI
SUGCT
MPLKIP
SDHAF3
BRF2
TSFM
SLC38A9
SLC35A3
PSMD3
SRRM3
HUS1
IAH1
CASC3
CCNT1
INPP5F
POLR1H
ALKBH3
ING2
COPS2
MED18
PHIP
TIPARP
REM1
DEFB124
PIGW
MYO19
PARP2
FABP6
NAA20
CENPV
SMU1
NCBP3
SNRPD1
RANBP1
AGK
CRKL
CDC73
ZNF772
TGFBR2
TTLL1
MRPL3
LRRC37A3
CLUAP1
GFI1B
SNRPB2
MTR
PLEKHM3
PRDX3
KRTAP10-8
TRMT2A
ZNF292
NFAT5
SMG7
SRSF7
NECAP2
TIMM22
N4BP2L2
VIRMA
WWOX
SACM1L
CCR6
FAM98B
MTOR
CNOT3
TRMT5
SLC38A6
SESN1
LNPEP
AARS2
ZNF165
CBWD6
ZNF280D
RBM45
RAB18
RPL26L1
TTC13
PRKAB2
ARV1
SEC23B
TTC5
CDK19
AMD1
HAX1
ZSCAN30
SNRPE
TIGD1
EIF4E2
ZNF76
TEX50
PPIAL4F
PPIAL4E
PPIAL4D
WWTR1
PIP4P2
MAGOH
CLTC
R3HCC1
TMED1
PDCD6IP
LRIG2
CASP10
LRP6
FBXO38
COA6
RNF125
RPS15
MYCBP2
FOXN1
C2orf15
PIH1D2
NKAPD1
STOML2
CADM2
PUS10
PRRC1
PEX13
MRPS14
U2SURP
VPS13B
ZNF554
ALG10
PRKAG2
WBP1
INO80B
NBPF1
TEX9
RFX7
H4C12
LSM5
TIAM1
ANKRD40
C10orf88
ZSCAN22
CALCRL
CEP120
DHRS2
AAR2
KMT2D
RPL5
STX6
MSL2
LPIN1
CEP57L1
DLAT
MRPL16
SMIM13
TBCK
AIMP1
SUGT1
RCHY1
GSPT1
AVL9
CEP85L
CCDC88A
DDX1
NOXA1
MRPL39
ARRDC2
GABPA
ATP5PF
HLA-E
TARS3
CASS4
CLUL1
NMNAT1
LZIC
RNF6
PPP2R5B
NDFIP1
FAM234A
MAPK1IP1L
IQSEC3
KRR1
DHX16
MFF
ZZZ3
PRMT5
MEMO1
GCNT1
WDFY1
ITGAL
ATG101
PFKM
SNRPD3
GUCD1
SRP9
H4C11
MRPS33
PCBP2
SLC35E2B
YTHDF2
CREM
ABHD11
EPB41
ABCC10
ZNF512B
PTPN4
ZNF385A
ZNF546
FBXO22
RESF1
TRAM1
TMEM65
GNB2
RRP15
CDIPT
CNN2
HNRNPA1L2
RPS19
GLIPR1L2
SGMS2
DHTKD1
SOD2
NUP107
ELAVL3
MRPL19
C2CD5
PRPSAP1
MED4
TSC1
MTMR6
RPS3A
ASF1A
PPP1R3B
SDCCAG8
CEP170
TMEM259
TRDMT1
STK19
DXO
KNL1
EEA1
TBL1X
ZNF3
DNAJC11
RABGGTA
KIF2C
MUC1
LRRC59
OR2AP1
SETD1A
ZNF383
LTA4H
SLC35B1
ZNF846
SLC9A1
HEXIM1
MIS18BP1
PES1
MMEL1
CPLX2
ATXN7L2
ARMH3
XKR7
ASNS
COG2
CCDC174
ERCC6L2
ATG4C
ZNF296
GEMIN7
RTN4
INTS4
TPM3
EIF2B3
PAK1IP1
C6orf52
WDR70
RPS26
NR1H2
RCAN1
CDK12
CRBN
POLR3GL
IFI44
ANKRD34A
SHF