ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1177903 | HCT 116
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◣ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MAMDC2
FRG2C
PMF1-BGLAP
PMF1
FRG2
UNC45B
COL23A1
FANK1
PHB
KLHDC4
CCDC200
TTLL12
POTEH
PMAIP1
SUPT6H
SDF2
CBX1
LMLN2
SCGB1C2
SCGB1C1
ZNF264
MUC3A
NARF
CYBC1
CANT1
EEF1A1
PDXDC1
MRPS7
GGA3
NDFIP1
H3-3B
FAM117A
ATAD2
FH
CACUL1
TCF7L2
MPZL1
PHC2
ZSCAN25
SHOC2
BBIP1
TMEM71
PHF20L1
CYC1
BAG3
MTRNR2L8
AHI1
UBALD2
TRIM48
OXLD1
CCDC137
NBPF1
STX12
RPL38
ZFP91
LPXN
USP10
NOTCH2NLC
FRG1
NOTCH2
LEMD3
GRB2
TRAP1
WASHC5
NSMCE2
ABRAXAS2
DDX17
SLF2
CTAGE8
CTAGE4
ACSL3
KIAA1549
PDCD6
SMC3
REPS1
ZNF12
TRMT1
NACC1
CCDC30
ZMYND12
PPCS
THOC3
SMNDC1
UROS
BCCIP
DNAJB12
DHX35
FBRS
PAXBP1
TNFAIP8
ATG16L1
LOC100289561
PDE4DIP
SMAP2
CHORDC1
ABCD3
NME2
EXOSC2
EIF3F
WDR43
MUC1
CSNK2A2
ZNF717
SURF4
ZKSCAN1
VKORC1L1
ICE1
PCOTH
MIPEP
UBR5
MTRNR2L2
MSH3
DHFR
TACO1
DPP9
C8orf76
ZNF652
EXOC6
ATL2
IMMP2L
SPAG9
FBXO11
PLEKHA1
SEC61G
C10orf88
EPN1
MCMBP
MTMR4
NDUFAF6
CCDC186
SPATS2L
MTX2
PIGF
CRIPT
BICD2
TEX10
ZNF718
ZNF595
PPA1
C7orf25
C15orf40
PKD1
LRRC47
ABCA5
PRKACB
SERF1B
SERF1A
CPT1B
CHKB
ABL1
POMZP3
KLF5
MSANTD4
FBF1
USP7
EFR3A
TSPAN10
NPLOC4
MTHFD2L
RMDN1
TEPSIN
NDUFAF8
NOTCH2NLB
NOTCH2NLA
RPS15A
CLK1
GLI4
SAMHD1
KRTAP4-8
PANK2
KRTAP4-11
TADA1
ZNF326
SMAD5
SEPTIN9
DECR1
ARHGAP11A-SCG5
ARHGAP11A
BSPRY
ARHGAP39
CEBPG
HIPK1
ACADSB
EIF2AK3
WASHC1
IKZF5
ARHGAP29
IREB2
PREP
ASPH
EIF3A
E2F3
ZMYM3
PRIM2
ZDHHC6
VTI1A
TAF10
MSRB2
ALAS1
PKD2
ST14
SEC22B
WNT16
LATS1
DSCC1
MTDH
RDH14
RBM42
POM121C
MPP7
C8orf33
ECE1
PLEKHA3
FKBP7
GAN
CACTIN
ETNK1
VOPP1
PIK3CA
DYRK3
GPI
MYO5C
JMJD1C
COPG2
ADAR
NCBP2AS2
NCBP2
RPL13
LSM6
REXO2
C16orf87
PDCD4
FNBP1
RWDD2B
KRCC1
WAPL
SUMO2
RNASEH2C
MTRNR2L1
FAM13B
SEC62
BFSP1
PDXK
PDP1
TM2D2
ADAM9
DSTN
COL4A4
COL4A3
GTF2A1L
SCYL3
PIGC
OAT
CLTCL1
SIN3B
SMARCE1
TMX4
CCZ1
PIP4P1
FAM234B
GSTO1
FBXO31
SLC45A4
POMP
ARF6
CCDC138
RBM22
SEC11C
SAFB
SAFB2
MRPL20
CBX2
VAMP3
FAM169A
RECK
MEIS3
TMBIM4
PFKM
SENP1
SLC38A2
MRTFA
SBF1
USP36
TMEM139
CASP2
PARP8
ETS2
ACOX3
TRMT44
SMARCD2
NDUFAB1
ZCCHC8
YTHDF1
RALGAPB
RBPMS
EHD4
TPT1
DYNLL2
MICU3
MYBL1
ESCO2
CCDC25
MYD88
ACAA1
GSK3A
ELOB
PLA2R1
DGKZ
PREPL
CAMKMT
LEMD2
TESK1
PHAX
CRLS1
WAC
ZNF706
DUSP5
NPC1
FERMT1
GPS2
PAWR
PLEKHF2
FAM124A
ZNF623
TIGD2
GFI1B
TSC1
SEC22C
SS18L2
MKRN1
PRDM4
MYLK4
TMEM131L
WRNIP1
IGSF3
RAB4A
TMEM245
PIAS4
DNMBP
USP33
RFT1
LRCH3
METTL23
JMJD6
CALCOCO2
RGS22
KDM1A
TEX46
FAM83D
OXR1
FLYWCH1
CLTA
GJB2
ARL8A
DENND10
ATP8B1
SDR42E1
EFHB
RAB5A
OSBPL5
DCUN1D2
ADIPOR1
HGS
ARL16
HPS6
TMOD3
YPEL2
INTS8
TBC1D31
SLC25A37
RAB11B
ELOVL7
TBL2
HMHB1
RUVBL1
RAB18
RPL7A
MED22
EEFSEC
SOCS5
HERC3
MEST
UHRF2
WWP1
UBE3A
UTP18
MBTD1
ANKLE2
ATP2A2
ACVR1B
ANAPC7
EXT1
MCL1
RAPGEF5
ZNF775
FEM1C
PRELID3B
ABI1
PAG1
RFC4
PRDM2
RCN2
PCNX2
ZBTB10
ARSB
SCN8A
P4HB
DOCK5
AKIRIN1
OCIAD2
SRSF5
MCAT
C2CD2L
TSPAN3
FBXO33
FANCA
KRT19
C11orf97
PM20D2
NF1
UBE2G2
TMEM160
EGFR
COBL
LBR
ANGEL1
TAF5
ANTXR2
RP9
ANKRD18B
PEX7
MFSD12
RNF169
RB1
DOCK1
CTNNAL1
ACTL8
TBPL1
SLC25A28
KIAA1586
SPG11
PARP6
HMGCR
TERF2
RC3H2
RAB5B
VIPAS39
AHSA1
PELI1
HSP90AA1
CTAGE6
RC3H1
NSF
ANAPC11
ALYREF
TMEM175
GAK
AGO2
SLC38A10
EPS8
CYREN
TIMM23
COX18
UBN2
RPS27A
CLHC1
ELOVL5
TRAPPC3
PLGRKT
MARCHF6
SUFU
ACTR1A
GMCL1
TBC1D30
PDPK1
MAP7D1
GNS
PSME1
FITM1
LSM11
ZFYVE27
LPGAT1
FADD
FARP2
DYRK1A
APPBP2
HNRNPM
CDC25A
USP43
PALM2AKAP2
RPS20
PRPSAP1
BMT2
MRPL38
ANKRD46
NUDT4B
NUDT4
VPS13C
FDX1
NAMPT
NFATC2IP
URB1
RRAS2
MAPK9
CDR2L
HNRNPAB
ALDH4A1
FRMD5
UBN1
GLYR1
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
CRKL
ARID2
HEBP2
RAB6A
UBE2Z
URGCP
XPA
BZW1
E2F6
MAP3K3
PGAM5
NEDD1
LRPPRC
DENND1A
TOB1
SMARCB1
PDIA5
ILKAP
URGCP-MRPS24
YWHAH
ITPRIP
GPN2
GOLGA7
ARFGEF1
CPT2
SART1
ARL5A
SSRP1
P2RX3
P2RX4
CNKSR3
DENND2B
PPP1CB
TMEM131
NT5C3A
OST4
ZNF607
UBE2S
NHLRC2
DCLRE1A
SIRT7
PCDHB15
PARK7
APEH
VPS26C
ABHD10
GATM
SPATA5L1
MIS18A
MAP1LC3B
GPRIN1
XPNPEP1
CD81
PLCG2
GPC1
ATP1A1
STAT3
AGK
CLTC
EPB41
PNPO
RNF145
GPX1
YWHAZ
FAM86B1
LRRC58
SMAD1
TM9SF3
ITM2B
SPATA6L
PLPP6
KRTAP4-12
MATN2
TYRO3
LRRC37A3
TMEM202
ACSF3
EEF1AKMT2
MAPKAPK5
NUDCD1
SMAD3
DNPH1
SYT1
AGTPBP1
HSPH1
MGRN1
CENPC
STK3
ANK2
DOCK9
HEXB
CRELD1
FZD6
CYTH1
STIP1
SINHCAF
CXCL1
MORC4
MKI67
RALYL
KLK2
LRGUK
POLE4
CTNNB1
LRRC59
RTN4
OSBPL8
DYNLRB2
EFCAB14
RNF168
HASPIN
NSD2
DNAJC1
SYBU
MICOS10-NBL1
MICOS10
FCHO2
DCAF12
NT5C2
RABL6
USP6NL
SEMA4D
CLSTN1
CLYBL
KRT10
TMCO4
KLHL20
SOD2
WTAP
PHB2
STX1A
SCARB1
MARK2
CISD3
GTSE1
PSTPIP2
C10orf95
ZCCHC14
MTMR12
ANKRD28
RPL7
RDH10
VRK1
NOP9
DHRS1
COPRS
KIRREL1
ZNF577
TGFBR2
STAMBPL1
MIF
SRPRB
HNRNPU
ZC3H4
FUCA2
FAM53B
FBXL13
ARMC10
PGM2
PDCD5
CXCL2
EIF3B
EXT2
OTUB1
MTAP
ERO1A
CCNJ
SDHA
CCDC127
CHL1
SNX16
MTR
TRAM1
UBQLN1
DGKH
TSPAN14
PTPRF
RNASEH1
STPG1
NIPAL3
PTBP3
ARPC1A
SRSF2
MFSD11
C9orf85
ABHD17B
RRS1
ADHFE1
HIPK3
STX17
GALNT12
MIEF1
RHOC
NELFCD
FAHD2A
AP3D1
HMGB1
NFAT5
PTPN4
DOCK7
PLEKHG1
COX6C
C22orf39
SLC26A6
COP1
TPMT
KDM1B
PINK1
NDUFV3
PPP6R2
KLHL5
C1GALT1C1L
CCDC88A
IQCF2
RPL22
ADPGK
MRPS36
DNAJB14
H2AZ1
SOCS3
HSPA4
CTPS1
TPD52
UNKL
DBNDD1
CNN3
PTP4A2
CNNM2
MSH6
TMEM51
SLK
GAS8
TICRR
ERRFI1
FAM110C
FOXJ3
KDM3B
HDAC1
SH3BP5L
CDK11B
CDK11A
TBC1D5
PISD
MARCHF8
HACD2
NDUFS6
MRPL36
DEF8
PLA2G2A
PROSER1
NHLRC3
NANOGP8
TTBK2
ZC3H7A
EYA1
C2orf69
SBK1
RPL14
ARHGEF35
PANK1
FAM91A1
DUT
ENTPD7
MTFMT
SCD5
DUSP6
SCAND1
NT5DC1
KLHL41
NLE1
B9D1
FBXW8
C1QBP
EMC8
COX4I1
OTULIN
EIF4H
B4GALT4
CSNK2A1
FAM104A
EXOSC10
C17orf80
MRPL52
PSMG4
SCRN3
CIR1
COA8
BAG5
RBM12
CPNE1
CDCA7
ODF2
MLYCD
UVRAG
CCDC178
STMND1
POPDC3
DSTYK
ARL17B
ABLIM1
PRRC2B
PDCD2
YES1
NUS1
EIF2S2
C6orf226
MAGEF1
PRPF19
UBFD1
EARS2
SPG7
RAD23B
OSBP
FBXO42
CAPN2
POLR2D
PI4K2B
BPHL
RAB2A
TSNAXIP1
RANBP10
TANC2
PIGN
H2AX
STX3
TEAD1
SLCO4A1
FEZ2
ELK3
TADA2B
CCDC96
LGALS3
DPYS
CD9
SH3GL2
CYP2A13
MRPL30
MITD1
GATAD1
WASHC2C
PSMD1
DTD2
IWS1
MEF2D
TOMM34
PPP1R9B
SPOPL
MPP5
POMT2
GSTZ1
RCL1
NCOA2
PDZD8
UAP1
ROCK2
RHNO1
FOXM1
DHRS11
SLC12A5
PLBD2
SERINC2
SLC25A31
HSPE1-MOB4
HSPE1
HSPD1
PLEKHM1
RANGAP1
USP1
RNF139
TRIB1
PKIG
AEBP2
SCN11A
WDR48
CPOX
DLG4
TBXAS1
HIPK2
UBALD1
RAI1
ACADVL
GFPT1
SLC25A25
STIMATE-MUSTN1
STIMATE
UBAC1
ERI3
ARHGAP17
SOHLH2
SRP72
TGFB3
IFT43
ARNTL2
NAIF1
CHD5
CELF1
TMEM183A
MS4A1
TMEM106B
SLC35A5
DERA
STRN
NANP
BIN3
WIPI2
FAM122A
GPT2
GSKIP
ATG2B
NAF1
DLG1
DCTN1
CUX1
KLHL9
ARHGEF3
RBM26
COG6
KDF1
SMC4
IFT80
FAAP100
DAP
JPT1
RHPN1
SMIM43
CCNY
NBEA
KCTD9
CDCA2
CHIC2
RBM17
HECTD3
NEK7
STRIP1
RTRAF
IGF2R
MBNL1
ARF1
MIF4GD
DDT
IDE
UBE2D1
FAM204A
PEX2
CERS6
TAF9
RAD17
AK6
PLEKHO2
MNT
EIF5
PATJ
FKBP4
LDLRAP1
SLC38A9
CYRIB
DFFB
CEP104
RNF19A
SLC35F2
THAP12
GVQW3
TBC1D14
CCT2
PPM1D
ITGA3
PPP4C
FAM135A
FAM177A1
SDCBP
SYNJ1
GKAP1
EZR
MXD1
SRPK1
STX7
ACTR5
SETD7
ZNF704
HSD17B1
PTS
PEA15
SH3D21
SH3PXD2B
IRAK2