ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX065546 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◣ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KCNJ15
SMCO1
BSDC1
ITGB3BP
EFCAB7
APOA1
CCDC200
C19orf18
WDR74
AADACL4
DEGS2
KRBA1
YPEL3
TBX6
UBE2F
MAMDC2
CBX1
RABGAP1
OPRL1
LKAAEAR1
ZFP30
TMEM89
DISP1
STC1
ZNF32
GBA
ZNF572
ZNF829
ZNF568
LCN8
RABGAP1L
PDE11A
MAPRE2
DNAJC25-GNG10
DNAJC25
PTDSS2
ANO9
ZNF623
PRSS38
MTF2
SAMD4B
SF3A3
MTRNR2L8
DUSP6
RBBP5
YWHAQ
COMMD2
RNF187
KRTAP5-1
COL23A1
TMEM229B
CANT1
COX16
DHRS2
UTP3
CLTB
NUF2
DBNDD2
CFHR4
MROH7
TMEM132A
COL18A1
ZNF292
GALNT1
ZSCAN22
TBC1D19
ATP5MC2
FAM209A
RPS7
TRMT5
SLC38A6
ZNF566
ACTL8
SOD2
WTAP
ANP32D
GTF2H4
TOMM20
TMEM41A
SSBP1
RWDD1
MMEL1
CCDC174
TSFM
ATP1A1
TARS2
IGFALS
HTR5A
RNF125
SELENOH
NEMF
MAN2A1
EPHA3
SLC24A1
RERE
CAT
TTI2
ZNF772
GPRC5C
CEP85L
ZNF570
ZNF569
PRRT1B
ZNF117
ATF7IP2
MAST4
SLC1A7
MED23
TRIP4
CWC25
DPYSL2
PNMA2
TIGD2
SLC45A4
DMAP1
SLC43A2
MRPL1
ZNF790
FBXW7
ZBED9
PEX3
ADAT2
NDUFB3
FAM126B
GLIPR1L2
GTF2H2C_2
GTF2H2C
MNAT1
TTLL1
TRIM41
BRAP
ACAD10
OSGIN1
LRCOL1
NDUFS7
NR1H3
ACP2
CFAP298-TCP10L
CFAP298
YJU2
MLPH
LARP1
ARHGAP39
MTR
PDCD6IP
SNRPE
FAM13A
CDC5L
C2orf88
PDE1A
GALNTL5
MMACHC
CCDC130
MAIP1
TXLNB
JMJD1C
TDP2
ACOT13
FAM184A
SMG7
RAB18
RAB30
BANP
PAFAH2
ZNF226
ERN2
TLR2
TMEM242
TTC32
RNF217
HDAC2
SUMO3
FGFBP3
TTC26
PPIH
RBBP9
SIKE1
TMEM44
PAXBP1
FRA10AC1
DNAJB12
PPRC1
APRT
SKP2
LMBRD2
MRPL48
NME1
TARS3
FAIM
ZMPSTE24
RAB5IF
PDGFD
EXTL2
TMEM14C
LRRC49
THAP10
RUNDC3B
GCGR
TMEM38A
SMIM7
METTL25
CCDC59
KDM3A
STAT3
MRPS18C
HELQ
TATDN2
EIF2D
NEU1
LURAP1L
RTTN
SAR1B
LRFN3
CHCHD6
PNPO
POMGNT1
LURAP1
REEP3
TACO1
HAX1
IARS1
SLC33A1
BMS1
CD14
CCDC107
TFPT
PRPF31
GABPB2
RCAN1
LIMK1
SLC35E3
CTAG1B
CTAG1A
ZNF391
PARP2
MRPS14
SMIM13
RANBP2
SLITRK5
ZNF540
ZNF571
MRPS23
ZNF350
HEXA
POLR3B
GALK2
COPS2
TPM4
PARK7
TRMO
NUP155
ATP6V0E2
ZNF687
RPL27
DEK
POLDIP3
TMEM43
CHCHD4
REXO4
ADAMTS13
RBM45
RPS3A
BAIAP2
ZNF165
STOML2
PUS10
PEX13
CALCRL
LRRC29
GOSR1
RPA2
ZNF354A
SYT1
SNCG
MMRN2
KANSL3
FER1L5
BORCS6
MYO1H
ZNF300
WDR11
CDK19
AMD1
METAP1D
GORASP2
DSTYK
NECAP2
PIH1D2
NKAPD1
RIF1
SAMD1
TTLL12
IL36RN
IL36B
SLC3A2
FAM199X
SGMS2
SYNPO2
CNN2
TMEM259
ZNF527
CCNL1
NRL
DCAF11
DCP1A
NME4
REN
MOB4
NCOA7
ABHD10
ZBTB8OS
RBBP4
PKIB
SERINC1
AURKAIP1
TEFM
CUL5
RPL7A
MED22
SURF2
SURF1
SULT1C2
MTRNR2L2
MSH3
DHFR
NUP54
EPRS1
INTS2
RPS13
SDR42E1
CLPTM1
SLC35B4
ZNF324B
POLG
CDC73
TIGD1
EIF4E2
RRP1
RPS29
PNPLA7
CCNC
RPL5
ISY1-RAB43
ISY1
FAM174A
DCLRE1B
AP4B1
BORCS7
VPS45
ZNF20
SARS2
MRPS12
PPIP5K2
GTPBP3
ANO8
COX7A2
NUP107
ZNF556
SLAIN1
STX16
ZNF841
MRPL30
MITD1
SLC35A3
SNRPD1
PIGC
ECHDC1
LUC7L2
FMC1-LUC7L2
FMC1
TMEM114
EPB41
ZNF791
ZNF490
PCDH15
GABRR2
MRPL40
HIRA
NOP16
HIGD2A
SLC25A16
ARHGEF16
MSRA
KRR1
DYNLRB2
TTC3
TOGARAM1
KLHL28
MRS2
FDPS
SLTM
LRP6
NBPF1
DCT
KRTAP10-9
EFHD1
SF3B5
THEM4
OR4K17
COPS4
SMIM31
MRPS33
TAF12
N6AMT1
TRIM46
KRTCAP2
APOBEC3B
RPL37
DRG2
RPS14
MIER1
EP400
DNAI4
EXO1
SPANXB1
PPIG
GSTA4
NOL12
ZMYND8
FAM13B
NOS3
SEL1L
STXBP3
POLR1F
ZNF793
STX18
EIF3F
SLC2A7
CCDC97
OAZ3
ZNF385A
ATG5
UBOX5
FASTKD5
LAMTOR5
CCDC33
SPG7
OSGEP
APEX1
WDR36
METTL9
ZSCAN30
ZNF383
RPS12
TMEM107
P2RX6
ZNF56
SPRR2F
LRRC59
CDKL2
CDK5RAP1
PRDM1
CSNK1E
ACYP2
ST6GALNAC6
CLDN16
ZNF134
ADNP
TGFBR2
SLC30A5
FOXO3B
TMEM72
FBXO44
FBXO2
TSTD3
HAPLN2
MUC3A
ARID1A
TBL1X
NMRAL1
HMOX2
ERMARD
HIGD2B
BBS4
SRP54
ACTRT2
IRAK2
ATF7IP
LPIN1
DCP1B
POLR3G
MBLAC2
CHEK1
SUPT3H
SNX14
PXMP2
POLE
ZNF561
ALG10
ALG14
UBR2
DAXX
GPN2
ZSCAN31
TPR
ODR4
ALDH9A1
MTMR9
ZKSCAN3
CLN5
DPYSL3
CCDC120
CPPED1
GABPA
ATP5PF
DHX16
TRDMT1
ZNF846
DDX41
NUP205
PPOX
HBS1L
ADCY10
CALD1
NARF
CYBC1
C3orf14
GRPEL2
GOLGA5
BRF2
ATG4C
B4GALNT2
TMEM106B
CCDC124
SLC2A4
H2BU1
H2AW
INPP4B
SULT1C3
TPK1
PHIP
TIAM1
SRP9
GPR137
FOXP1
DNAJC19
WBP11
C12orf60
MAD1L1
C8orf37
RIMBP3C
RIMBP3B
ZNF335
MRPL24
CRNKL1
CFAP61
SLC17A5
CHD1
FAAH
SNIP1
DNALI1
DHTKD1
RSL24D1
GTF2B
CNIH4
PLS1
TRMT11
GOLPH3L
PNISR
ASCC1
ANAPC16
NMT2
ENG
SUPT7L
SLC4A1AP
PDE4DIP
ZSCAN25
TMEM101
WBP1
INO80B
SYNCRIP
LGR5
MTIF2
TMBIM4
LOC102724265
SEC23B
PES1
HEATR1
DNAJC24
DCDC1
TAF13
IRF9
DUSP12
ANKRD36B
LOC100129484
CEP85
HMGB1
USPL1
TNPO3
ABCB10
EIF3D
BAG6
APOM
PLCH1
SLC25A21
RUFY4
CYP17A1
VTA1
NMBR
CATIP
TMEM116
ERP29
ARL14EP
COMMD6
UCHL3
INSYN2B
ZNF285
ZNF408
ARHGAP1
IPO4
RAD54L2
WDR55
COG2
GRM4
ARID3B
ABCA3
UBE3B
KCTD10
DEDD
MICU2
KLHL32
CYCS
JOSD1
GTPBP1
TXNRD2
SEC22B
LSM5
AVL9
ATG101
CCDC115
ZNF501
UBE2L3
MFSD8
ABHD18
HECTD1
TXN2
VPS25
RNF144B
CFAP20
C6orf89
MRPL45
OSGEPL1
ZCWPW2
AZI2
FBXO28
HIPK1
ZNF589
SMAD3
PARPBP
NUP37
ELFN2
IPO7
KLF16
PBX3
EXOSC10
TMEM222
OPA1
RNF6
FBXO22
SLC25A53
PSMD11
PACSIN2
MED11
MYO18A
CFAP410
PGM1
AQP4
IST1
GPAM
PSMD6
DDX46
NUDT15
PPDPF
CYB5R4
MRPL53
WDHD1
SOCS4
FBXL19
SMPDL3A
POLR2J3
PDCD7
HACL1
BTD
SUGCT
MPLKIP
ACBD6
GTPBP10
UFL1
TM2D1
GYPC
MAST2
ELFN1
TNFRSF19
RIOK1
CAGE1
C15orf61
NLGN1
INO80C
DDX18
FAM228B
SF3B6
ALKBH3
MED18
RPS26
CSDE1
C17orf50
TAF3
DCAF8
ATL1
ATG9B
ABCB8
MZT1
BORA
IRAK1BP1
CORO2B
SPON2
INTS5
PPP1R11
CCNI
C2CD5
SIRT4
ZDHHC6
VTI1A
RFXANK
BORCS8-MEF2B
BORCS8
RPTOR
RPS18
VPS52
ESCO1
HMGCR
B3GALT4
GPR89B
LCA5
HMGCLL1
RAB37
ACOX3
TRMT44
TOR1AIP2
TOR1AIP1
MRPS31
ALG10B
WARS2
ZNF518A
NDUFA12
EIF2S1
ATP6V1D
TMEM59
TCEANC2
VPS26C
BOD1L1
CREBL2
GPATCH3
LRRC10B
SFXN2
ARL3
PLD4
SULF1
SNX17
EIF2B4
ZNF582
PAAF1
COA4
WDR62
THAP8
ZNF2
RIMBP3
SNAP47
JMJD4
TEX50
FAM234A
CIZ1
AASDH
THG1L
IPP
MTRES1
COL4A5
PDSS2
COL4A6
DRG1
PABPN1
ZNF3
SAYSD1
LTF
SFN
MMUT
CENPQ
C11orf65
PPP1R9A
SPATA7
C6orf118
ZNF345
GFM2
TMBIM6
TMA16
HMGN4
BCKDHB
H4C14
MRAP2
GSR
KBTBD3
AASDHPPT
PEAK1
HMG20A
ASCC3
GPATCH4
SULT1C4
DPY19L4
SCGB1C2
SCGB1C1
MRPL21
IGHMBP2
SMU1
R3HCC1
RALBP1
ZNF529
ARHGAP19
ZKSCAN2
ZNF461
ZKSCAN8
SPAG9
TYW3
CRYZ
NUDT5
CDC123
PCDH9
SUMF1
DYNC2LI1
GASK1A
CBWD5
CBWD3
CCNT1
LTA4H
PPIL3
NIF3L1
IPO13
ZNF331
ZNF839
GMEB2
FDXACB1
C11orf1
TMEM33
TRUB2
COQ4
VPS13B
TMEM138
CYB561A3
FITM2
C15orf40
FBXL17
ST6GALNAC2
SEM1
HSD17B6
EPN1
GOT2
NEK2
PPWD1
CENPK
EIF2S3
CNIH3
SCCPDH
FAM133B
EIF3E
AARS2
FANCI
CCR7
PCNA
WNK1
RBM34
RAG2
IFTAP
BBS5
MLIP
TIPARP
MRPL3
FBXO38
MSL2
PIKFYVE
DNAJC16
CASP9
MDM4
MRPS16
NOLC1
ZNF33B
DPH6
TXNDC12
BTF3L4
LMO7
PUM1
H4C8
DNAJB13
PPP4R3B
ETFDH
C4orf46
PLEKHA3
FKBP7
COX18
MRPL54
APBA3
THRAP3
C2orf42
EDEM3
GAR1
TSG101
NDUFS3
KBTBD4
CUL2
NDUFC2-KCTD14
NDUFC2
PSMA1
SNX5
MGME1
GCLM
UFC1
VPS33A
MDP1
CHMP4A
RNF207
RCAN2
GNE
IMPACT
CTH
NOXO1
GFER
MAP2K7
DUS3L
CNOT2
SHC3
TAFA3
PPM1J
MBOAT4
ZBTB45
TMEM79
SMG5
SRSF7
DHRS13
TMEM69
GPBP1L1
RARRES1
LOC100421372
HSPA14
CDNF
NDUFB2
RNF182
MRPL42
NAT10
TTC37
ARSK
ROBO3
DUS2
DDX28
SYMPK
FOXA3
DNAI3
ZNF362
HSPE1-MOB4
HSPE1
HSPD1
DPP9
PSMD3
CACNG1
OGT
TRIM59
CMSS1
ATP5MF-PTCD1
ATP5MF
FAM71E1
EMC10
NSUN4
HLCS
CNTRL
KIF15
KIAA1143
C5
BCL2L13
ZNF23
RCCD1
C16orf92
ZNF184
LYRM2
PLAC8
HNRNPR
TXLNG
DCUN1D5
TFIP11
MXD3
PHTF1
CALCB
RBM33
ZNF577
FBXO31
C18orf21
HIP1
CLEC12A
GCFC2
CCDC77
CATSPERE
C1orf53
COL14A1
CYP27B1