ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9823128 | GM12878
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◣ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

DUX4
STARD10
FRG2C
IPO13
CTU1
SCGB1C2
SCGB1C1
C1orf159
PHF13
TBC1D23
POLR2J3
RANGAP1
MTRNR2L1
DESI2
RAB5C
AURKAIP1
GTF2H4
SDCCAG8
CEP170
TNFAIP1
IFT20
INTS9
HMBOX1
LOC100289561
MEA1
EIF1B
DHX34
RPGRIP1L
FTO
TIMM22
HEXIM2
METTL25
CCDC59
PSMC4
IFRD2
JOSD2
ASPDH
PACC1
TIMM13
NOLC1
TMEM245
RTTN
PES1
SCNM1
LYSMD1
CLIC4
NOL11
ENDOG
UPK3BL1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TSSC4
RALBP1
MRPL24
ZNF565
ZNF146
PAFAH2
MMACHC
LRRC37A3
CFAP20
NUDCD1
CCDC174
TSN
FRG2
PANK3
FEM1A
ZNF286A
CDCA3
STXBP3
TXLNG
FBF1
PHB
EFCAB2
KPTN
L3MBTL1
ZNF56
RBAK-RBAKDN
RBAK
C19orf25
LRRC29
ZNF444
GNAI2
SNX27
CARM1
ZNF189
MRPL50
BTRC
DUS3L
CHMP4B
EEPD1
GORASP2
PSMD3
CIPC
KNTC1
CLPB
CHD8
CDK13
EML6
DHX16
MYO15B
RAD23B
FNTB
PNKD
AAMP
AHCTF1
CHFR
SNX3
TMEM115
ANO10
MRPS22
RMND1
ARMT1
GOLGA5
CHMP5
BAG1
ZNF559-ZNF177
ZNF559
SEC11C
RPL5
PRCC
ZNF585A
LANCL2
HYAL1
NAA80
HYAL3
LRFN3
MICOS13
HSD11B1L
TPR
ODR4
C11orf49
ACIN1
AP2S1
STK25
DNM1L
C14orf119
GSK3A
RAD52
PSMD8
SUGCT
MPLKIP
SH3GLB2
PSMD2
CXXC1
SERF2
ZNF235
SAC3D1
NPAS1
WBP1
INO80B
RNGTT
WDR62
THAP8
BOLA1
CACTIN
GALNT1
TMEM59
TCEANC2
NDUFV1
EPRS1
ZW10
SMUG1
ZSCAN22
SLC4A2
CDK5
SLC37A4
CLP1
MRPL48
SPHK2
RPL18
FAM83E
ZNF268
RETSAT
ELMOD3
BRMS1
B4GAT1
UBR2
QTRT2
CCDC191
BAX
FAM133B
ZNF527
COQ8A
ZFYVE1
C19orf67
ZNF566
TTC13
ARV1
THOC3
RPS27A
CLHC1
C16orf91
UBXN7
PRMT2
ZNF599
ATL3
SOX6
AP2M1
ZFYVE19
DNAJC17
C11orf58
SKP2
LMBRD2
TMEM127
CIAO1
MRPL17
MAP3K7CL
CCT8
FAF2
C12orf43
COX16
GFI1B
TSC1
MAD2L1BP
TAOK3
VPS26C
GTPBP2
SUDS3
RAB18
FIS1
TSNAX
DCAKD
C5orf24
ORMDL3
MAP2K7
NMT1
NUF2
INKA2
DDX20
MRPL11
PSD
FBXL15
TAF5
SF3B5
USP32
DIXDC1
ZNF420
CRYAB
IPO7
ZNF473
VRK3
PLCD1
IFT88
HEMK1
C3orf18
ZNF25
EEF1A1
GAL3ST3
ZC3H11A
ZBED6
POLK
CERT1
SF3B2
EEF2KMT
CDK12
SLC35B4
FBXL19
NFXL1
OCEL1
NUP205
SURF6
CBR4
RB1CC1
ZFP14
PHF12
KMT5A
RILP
GSPT1
SERBP1
GDAP1
FBXO46
PPP1R12B
MEIOSIN
CKMT1A
BANP
PRPSAP1
FBXO34
PCM1
TTC31
CCDC142
SERTAD3
ZNF586
CKM
SMIM13
RCOR3
ARRB2
SLC39A11
SYMPK
FOXA3
SH2D3A
VAV1
RELL1
DYNC2I1
AHCY
SCAF1
RRAS
WWOX
MRPL38
RPL26
ZNF79
UBQLN4
LAMTOR2
FZR1
SDR39U1
ZCCHC4
RIF1
TMEM18
ZNHIT2
MRPL49
FAU
SUCLG1
ABI1
SLC33A1
C10orf88
PEMT
ELMOD2
RPS6KB2
MTCH2
SEMA4F
INTS4
WDFY2
OGA
HNRNPA3
DDX11
ZC3H3
STMN3
RTEL1
TIMM10
ZNF773
POLR2H
CLCN2
CCDC146
PPP4R3B
R3HCC1L
RPS12
ZCCHC8
KLHL12
ERCC4
CNPY2
SCAI
CPT1B
CHKB
ZBTB45
PLD3
C19orf47
P4HA1
ALAD
B3GAT3
PPP1R12C
TRIM28
MRPS31
EMILIN1
NOP14
GRK4
FHIT
ZNF225
TSNAXIP1
RANBP10
INPP5A
INTS10
TMTC3
CEP290
CMTR1
COX14
HARBI1
ATG13
ECSIT
THYN1
ACAD8
PHF23
GABARAP
SMPD3
NOL6
ENOX2
ESRP2
ZNF461
GOSR2
ZNF891
ZNF10
NEURL4
ZC3H4
DDX47
ACP6
TCOF1
GBA
ATP5MPL
SIRT4
PLK3
FAM187A
EFTUD2
CCDC103
RNF14
SERP1
EIF2A
ZHX1-C8orf76
ZHX1
ZBTB37
SRRM2
TMUB2
CEP20
SLC25A20
COPS4
CBWD5
MARK2
TMED4
LARS1
MIGA2
SMU1
PCBP2
ZNF350
TRIM59
ZNF416
CDK5RAP3
ERICH4
DMAC2
MAK16
ZIK1
NACA
PFKFB4
SAFB2
SAFB
CHAC2
SIX5
ZNF331
PA2G4
POLE3
C9orf43
PDCL3
YWHAG
CAPG
CEP97
SH2D6
SLC25A11
RNF167
MTIF2
POLR2E
PPP6C
THRAP3
LYRM7
STYX
DOP1B
PLAUR
MCCC1
B9D1
THNSL1
MAPK7
ASNSD1
ASDURF
EEF1G
MEN1
RAB1B
ZNF408
ARHGAP1
EIF3F
TSGA10
C2orf15
CYP20A1
SRCAP
LOC730183
VPS50
HEPACAM2
STRIP1
FAM72C
ATP6V1FNB
ATP6V1F
FAM72D
SESN2
SMG1
NDUFS7
CBWD3
CBWD6
MRPS14
PRKCSH
CCDC151
DNAJC16
CASP9
CEP164
SKIV2L
NELFE
MFN2
UBTD1
MMS19
SF3B1
VDAC2
ALKBH5
CTNNBL1
SETMAR
CAPN10
TSEN34
MBOAT7
CEP128
TMEM222
CCAR2
C8orf58
PARP2
ZNF585B
TIAL1
PSMD1
OSCAR
NDUFA3
TMEM143
SYNGR4
TMEM199
POLDIP2
ZNF576
IRGQ
RPL7
RDH10
NBEAL1
TARS2
DCLRE1B
AP4B1
BRF2
AAAS
RAB1A
ZNF451
KBTBD7
FAM126A
CDK8
SYCE3
CNIH1
RNF43
NHEJ1
RPL18A
ZNF284
ZMAT5
UQCR10
FYCO1
CCDC130
RAD51AP1
C12orf4
CDK11B
CDK11A
UBXN4
TAOK2
UTP6
UTP23
TMEM229B
NME1
ZNF772
MUC1
SH2B1
C7orf25
TUFM
SPTBN4
SCAMP3
SLC25A19
BLVRB
PSMD12
USP14
C6orf136
CPPED1
MRPL45
BORCS7
MVB12A
CAAP1
TPRKB
HSPBP1
BRSK1
MYORG
C9orf24
TIMM17A
THOC6
HCFC1R1
TNFRSF12A
PPP2R5D
DNAJB12
TMED1
GLIPR1L2
ZNF337
RRP9
PARP3
COX8A
TMED7-TICAM2
TMED7
SETD3
CCNK
METTL9
SESN1
CEP57L1
ARMH3
CCDC77
EIF3D
IARS2
BPNT1
RPS11
TERF2
TFB2M
CNST
STAT2
APOF
PIK3R2
DCAF1
ZNF7
WDTC1
RPL27
CDC73
CUL2
EFHB
RAB5A
PKN2
ZNF589
FAM220A
UBFD1
EARS2
ESCO2
CCDC25
CD82
CLPX
POMT2
GSTZ1
WDR87
SIPA1L3
HSPA13
GPANK1
CSNK2B
C6orf47
NTAQ1
LY6G5B
SPEGNB
GMPPA
HTRA2
DQX1
SNAPC3
GSN
SIVA1
MRPS35
ZNF419
TBCB
POLR2I
OVOL3
RAB14
ZNF787
RPL35
ARPC5L
GFM1
ERI1
CTDP1
UBE4A
DDX23
SDHB
SRPRA
THEM4
ATG5
RPL29
PARD6B
L3MBTL2
CCDC200
LUC7L2
FMC1-LUC7L2
FMC1
TIPARP
LRIG2
WDPCP
MDH1
RSRC1
APEH
SHOX2
VCPIP1
C8orf44-SGK3
CBX8
ORC4
MBD5
HSPE1-MOB4
HSPE1
HSPD1
RBM28
RWDD1
TAF12
ABL1
YIPF2
TIMM29
UBE2J2
ICE1
ARNT
MPI
DIMT1
ECH1
IRF7
DRG2
ADSS2
TMEM41B
CDK5RAP2
BCAS2
DNAL1
RPL23A
RAB34
CREB1
SKAP2
ZFHX2
THTPA
RALGAPA2
PPRC1
PSMD11
CD55
GAPVD1
C12orf29
SRP54
ZNF573
GATB
ZFAND2B
BARD1
ZNF417
NRTN
ZFPM1
HINFP
HMGB1
USPL1
GTF2H2C_2
GTF2H2C
SLC35E2A
MAPKBP1
VKORC1
PPP4R3A
CC2D1B
ZDHHC12
NIPSNAP1
ZMPSTE24
BNIP1
CCDC150
PSMB7
STRADA
MKNK1
IBA57
MARCHF2
ZNF567
SGCA
MYBBP1A
AOPEP
AFG3L2
MZF1
SAMD8
DUSP13
EIF3E
CMC1
APC
FAM160A2
CNGA4
MBD1
TTLL12
LSG1
ALG10
COMMD1
HPCAL1
USP35
KCTD21
MORC3
EP300
VTA1
NMBR
SNX17
EIF2B4
LZTR1
ADPRS
TEKT2
RRP15
MGST3
PGRMC2
PLEKHB1
SPATA25
CTSA
NEURL2
SNF8
ZNF468
ATP5PO
PARS2
PREB
PRR30
ZNF212
ATP6V0D1
AGRP
ATAD2B
CCDC6
ZNF180
NKIRAS1
EIF5A
RPL15
RHBDD3
EWSR1
TSACC
CCT3
UHRF2
TSPAN17
REXO1
MIB1
LIN52
ALDH6A1
NR1H2
PPOX
TOMM20
TIMM50
PKD1
RTL10
GNB1L
SPAST
YPEL5
TVP23B
PMM1
ZNF845
TMEM70
ELOC
ZFC3H1
THAP2
MINDY2
DCP1B
RABIF
DEDD
PUSL1
ACAP3
TRAPPC4
RPS25
USP19
NME4
CCNT1
MFSD8
ABHD18
MTIF3
XPC
LSM3
NOL7
CFAP410
TMEM14B
TOGARAM1
KLHL28
KMT5C
ZNF274
PITPNB
DECR2
POLD1
SPAG1
CCDC24
POLR2J
TOMM40
TRAPPC3
LEPR
ZNF133
INVS
ERP44
LEPROT
PPP1R35
DELE1
RIN1
SMG8
YTHDF2
CSTF2T
RBM25
KIAA0895
TESK1
MGRN1
SPRYD3
TCF19
CCHCR1
TMEM214
TOR1AIP2
TOR1AIP1
DNAJC25-GNG10
DNAJC25
BDH1
NUDT5
CDC123
SLC17A5
PPA1
PABPC1
THOP1
SGTA
GRSF1
DYNLT1
ST20-MTHFS
N4BP2L2
KIF2C
MRPL42
NUDT15
MEIG1
RAB10
MBTPS1
NRDC
GPER1
LRRC42
GALK2
SLC39A13
COPS2
PITRM1
MAN1B1
HSP90AA1
MVK
ZNF749
ZNF140
WDR20
PAXBP1
POLE4
HOXC6
KIFC1
RPS6
S100A13
PGM2L1
C2orf42
NAMPT
MATR3
COX5B
LCORL
CHTOP
IPMK
CISD1
HOXC4
ZNF134
GOLGA3
ARL6IP1
FAM200B
ZSCAN32
ZNF174
TXNDC17
KIAA0753
FAM135A
GATAD2A
MESD
ASH2L
ABCA3
TASOR2
ELOF1
NIFK
ZNFX1
DDX41
SIRT6
ANKRD24
GINS3
ZCWPW2
AZI2
KIF20A
BRD8
SMARCAL1
ETFB
TTC12
SHPK
CTNS
NKG7
CLDND2
HNRNPD
PRRG2
NOSIP
ITSN1
CRYZL1
FBXL12
GMPS
EIF2S2
CMSS1
H3-3B
UBALD1
UNK
GABPA
ATP5PF
MRPS15
HNRNPH3
PBLD
PTK6
SHBG
TEX22
FXR2
SRSF11
LRRC40
SETDB1
SMARCAD1
GFUS
ELP5
CTDNEP1
DNAJB1
MCM3
SNAPIN
DNAJC18
TECR
ZER1
SLC10A7
NDUFS3
KBTBD4
COG2
SLC17A7
ANKRD39
RHEBL1
SACM1L
ERGIC3
N4BP2L1
KDM3A
MRPS23
SRRT
ERCC5
LPCAT3
FBXL18
MYPOP
MED23
ASNS
SMIM26
CCS
CCDC87
EIF3C
EBAG9
EIF3CL
CSNK1A1
DDOST
ELP6
SPATA24