ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX011616 | hESC H1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◣ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

TRIM24
SLTM
TDGF1
PF4
PPBP
FRAT2
LARP1
ARID2
PALM2AKAP2
HHIP
REST
SOX2
EXOSC9
ANKRD1
MRS2
NECTIN1
SHCBP1L
SRPK1
SNX19
PGBD5
SLC24A3
NRG1
SMARCA2
PHF3
OTX2
CCN2
SLBP
PSIP1
MTRNR2L1
CNOT6
RPH3A
COTL1
ACSL6
NANOG
SMIM14
DPPA5
HOXD13
HOXD12
SOX6
GDF11
C11orf58
ANKRD36
LRRN1
CCDC60
CACNA2D1
TNFRSF11A
TMPRSS11E
TALDO1
SOX5
NRXN3
PRRC2B
MEN1
SIX3
RAPGEF4
MTRNR2L8
GLIPR2
MIB1
SYN3
GABRB3
AFTPH
MAD2L2
DRAXIN
TMSB4Y
MTRNR2L10
PLAGL1
TULP2
NUCB1
LRRTM4
CPNE4
TMX1
TMEM107
CACHD1
RGPD1
RGPD2
TTLL6
SPDYE7P
MTRNR2L2
MSH3
DHFR
ARHGEF38
MOBP
SLC2A14
RAD54B
FSBP
FZD8
RASA1
TWIST1
C4orf50
RAG2
IFTAP
CDC42
DEFB114
DEFB113
SGMS2
MEGF10
MTHFD1L
ZFYVE1
NXPH2
ZNF781
ETV3
PXDC1
MYO1E
FGR
PLA2G4A
SDS
OR11H2
CELA2A
RCN1
PARP1
MDN1
HIPK3
SLC22A16
PDHA2
CCNT1
SFXN1
KCNH1
CYP27A1
FMO2
PITX2
CER1
RASGEF1B
BMPR1B
OBI1
SGMS1
ADD2
BCAT1
ZIC4
SLC2A12
BNIP3
MCC
HCK
KLK10
ZNF608
L1TD1
MAN1B1
FBXW11
BIN2
CTSF
TMCC1
POSTN
KLF5
TLE3
TAX1BP1
WLS
SALL3
TRPM3
LITAF
NSUN7
MVB12A
LRFN3
UBD
N4BP1
NCOR2
CASQ2
MTRNR2L6
SH3KBP1
SLC25A23
CRB3
ITM2B
FLAD1
THRB
NR2F2
RGPD6
ACCS
PHC1
FAM24B
RGS2
ILF2
FAM178B
SNRNP25
POLR3K
OAZ2
NKX1-2
CDH12
H2BC21
H2AC21
H2AC20
CDS1
UQCRHL
BCAT2
HES3
ICMT
INAFM2
MED12
GSN
GCNT2
GUCA1A
ETS1
ATAD2
ZNF620
VCAN
ZFAND6
NTRK2
HMOX1
PPP2R3A
ANGPT1
GALM
PIK3R4
NPAS1
IBTK
SLC13A3
JPT1
TMC5
LRGUK
CRADD
PHF8
TRANK1
MRPL20
SORT1
FOXN3
ZNF281
PCDHA10
PLAAT4
FGFR2
FBXL19
GABRQ
FRMD3
SLC6A11
QTRT1
POLQ
AMBRA1
CYP2S1
NEUROG3
ENOX1
ZBTB39
FGF1
CTBS
CLDN23
OR2H2
TSGA10
C2orf15
ARSA
KDM7A
ECI2
GPR85
RIF1
CIITA
RMND5B
DNAJC7
FRZB
SCGB3A2
ERBB2
RNF43
PGAP3
SERINC5
GPRC5B
UPF1
IFNA1
AK4
HOXD1
ANKRD36C
CASP7
NGF
GIMAP5
C1orf198
RBAK-RBAKDN
RBAK
P2RY14
RASGRF2
PRR5L
COMMD9
LRAT
TOX3
PRTFDC1
MFSD4B
CELF4
FOXP1
DDX17
RNASE9
LIMS1
LMCD1
GRHL2
MAPKAPK2
CHRNA9
PRICKLE1
TNRC6A
RDH12
CFTR
ZNF532
GCSAM
SIRT4
CNMD
SORBS2
LHX8
PTPRN
SLC2A10
TSKS
AP2A1
OR5AR1
ZSWIM3
ACOT8
BEND3
SPIRE1
SMPDL3B
MUSK
IDO2
WDR74
DSC2
NDUFAB1
NRARP
MTF2
DUX4
MAMDC2
CDX2
NES
NAV2
FAM227A
CBY1
SACS
FRG2C
PIPOX
ZNF483
METTL11B
DNMBP
MUC1
ID3
ZSCAN2
AGO1
HMGB1
NDUFB5
MRPL47
LFNG
DUSP6
TCF7L1
CD99L2
SFRP2
PTMA
GOLGA6D
HDAC9
SOCS3
MUC3A
FAM222B
SPATA45
IFRD1
BCOR
SNRPN
SAMHD1
SRRM4
BTG2
GAD2
CLDN9
MED25
FUZ
POU5F1
EDDM3B
APOBEC3F
SMCO1
GRK6
PLPP2
NOTCH1
FRG2
DNMT3B
ZFHX3
ABHD11
HESX1
SHISA5
ETV1
SLC7A5
VENTX
ZNF398
NADK
NFE2L3
ZNF775
RIIAD1
PMEPA1
DDX43
FGD3
UTF1
WFDC8
PSMD9
HPD
ZNF343
ETV4
COL23A1
GOLGA6B
CCDC200
SNX16
NCDN
KIAA0319L
FGD4
LEFTY2
GOLGA6A
CELF3
TRAPPC8
FZR1
LZTS1
IER5L
CYP1A1
DAGLB
USP44
GADD45G
MYSM1
ADAM28
FAM120B
PHF5A
ACO2
FIGNL2
FBP1
NRCAM
LIN28B
FGF2
TRIM48
KMT2B
GNAI2
PPP1R16B
SNURF
GOLGA6C
SLA2
ESRP1
GPSM3
IL34
MCCC1
CYTH2
KIFBP
CDC42EP3
LEFTY1
SAMD5
FBXO40
PER2
TRIM2
TRIP4
DHDDS
DND1
SLC35A5
MACROH2A1
TMEM41B
ATG3
AMN1
PRDM14
FZD2
CCDC169-SOHLH2
CCDC169
HGS
ARL16
WNT5B
IQCH
AAGAB
LIPK
LRRTM3
CRYGB
SPIC
SNAPC3
ECE1
ZFC3H1
THAP2
LINGO1
TRIML2
PDPN
ITPRIP
GJA1
APOBEC3D
APOBEC3C
GXYLT2
CCT2
SCAF4
LIMCH1
SPRY4
PREX2
SYT2
ST18
UNC13B
PDCL
RFX4
CDC14B
PRR15
DHX32
SOX14
CEP41
DGLUCY
ECT2
CHFR
PCBP1
TGIF2-RAB5IF
TGIF2
TUBB
MDC1
ALDH1A2
NDUFS5
AASS
DCAF4L1
WBP1L
BFSP1
PCLAF
ONECUT2
ZNF436
DDR1
FAM180A
ITGB5
VOPP1
MTM1
ZNF335
EEF1A1
GDF3
CAPRIN1
KCNN2
FAM200B
DLL1
PIN4
VWCE
TES
ZSCAN10
TIMP4
WDFY2
DPH6
FOXD1
SRCIN1
SRSF7
OLFML3
HBG2
IFT80
RTN4
GET3
ADA2
SH3BP4
TNRC18
TBC1D16
ARIH1
CARHSP1
ITGB3
NDUFV1
KDM2B
PEAK1
HMG20A
KDM2A
NEBL
LOC100129484
CCDC130
MOG
TJP2
SLC39A8
MAST4
STK31
ISOC2
TIAM2
SENP2
WDHD1
SOCS4
EXT1
ZNF304
PUF60
SASH1
DENR
TGIF1
MMACHC
DUSP12
AHCYL2
USP7
C8orf58
TNC
WDR49
PYCR2
DDX3X
GTF2I
PNRC1
DST
LYPD6B
UGT1A6
SLC46A1
CHN2
KCNJ1
ALDH7A1
RGS3
RBFOX2
C10orf95
SINHCAF
NDST1
PLEKHG1
UNK
AEBP2
AKIRIN2
H3-3B
PTAR1
ACVR1
ZNF536
TNFSF8
KRT8
ANK2
ABCB5
SEC22B
CAPN3
ADAR
ZCCHC3
TOMM40
TMEM47
VANGL2
TTYH1
SLC20A2
PACSIN2
DOK7
ABL2
LRIG1
ESR2
CAMTA1
EMSY
C20orf96
PGPEP1
ZNF296
GEMIN7
C1orf127
PSME3IP1
SHF
LIN28A
FZD5
UFD1
TRIB2
CDC45
RASAL2
PXMP4
KDM3A
KLF3
CHD6
UBAP2
PDE1B
FXYD5
HES1
REV3L
AASDH
ZNF565
PITPNM2
DIDO1
AUH
SMAD3
RTBDN
MAST1
SIX2
ZBTB45
CCL26
GLDC
SLC33A1
NPSR1
LMNA
TPST2
DET1
TMEM43
CHCHD4
TIAM1
TESK2
PRKAG2
PDIA4
FAM20A
INSM1
ZNF600
TRPC4AP
SLAMF1
MYCL
SLC3A2
TCF7L2
SLC23A2
TFE3
TSPAN14
ZNF649
KLF7
SLFN12
TMUB2
DPPA4
ZNF195
RPL8
BCL9
ATP6V1G1
ZNF664-RFLNA
ZNF664
CCDC92
SUCO
RMND1
ARMT1
NTN5
MARCKS
PRODH
LOC102724788
ZNF875
VPS37B
F11R
TLE1
CDH10
SLC25A36
FOXO6
CHMP7
MAGEB2
TRPM1
CNOT11
WDR36
SOAT1
CTNNA1
SPHK1
LRRTM2
PYGB
FAM153B
PDGFA
ESX1
LRRC47
LIMK2
ABCC10
DISP3
VASH2
MSANTD4
SAPCD2
BFAR
KLF6
H3C15
H3C14
H2AC19
H2AC18
CNGA1
STMN1
STOX2
B3GALT5
NUP160
CFLAR
ZSCAN9
ZBTB18
TFAP2A
SLC16A13
MUS81
CFL1
PGK1
MAP6
OSBPL1A
MMP10
ZNF428
EPB41L1
CRISPLD1
ACSL1
MTHFD1
KCNIP4
ZMAT2
SELPLG
YIPF4
ZFP3
CSF2RB
BRINP2
PAK1
INO80D
PLPP3
TET3
ZNF552
ZNF517
DACT3
CDYL
PNCK
GSAP
ARHGAP42
APOBEC3G
NIPAL1
GAST
CCDC85A
S100A16
PIK3R3
ACOXL
CFAP20
G3BP1
ETV6
CPT1A
YAF2
KRTAP3-1
SACM1L
DICER1
ZNF202
CELSR3
TNFRSF6B
DTNA
ABCC2
F11
BORCS6
TRMT2A
RANBP1
SYNCRIP
BBC3
DPP3
IFI16
ZNF814
TKT
GLI2
TP53
ASIP
GPC4
OR2T1
CXADR
RFLNA
TACC2
SLCO5A1
OGA
SAXO1
POLB
MRPL18
CAAP1
DHRS3
NUAK1
MBOAT2
SDCBP
SDHC
UBQLN4
LAMTOR2
DDX39A
CD200
SALL4
NEPRO
EPHB3
HMGN1
BAHCC1
ARSL
CTNND2
ANAPC15
PSME2
CD2BP2
HOXB1
KNTC1
ERMN
GALNT8
SLC6A8
MEX3D
SNAP23
TRIM13
ID1
C22orf39
MEIS2
SPTLC2
PREP
PIF1
MYEOV
HSPH1
DHX8
HES5
PANK4
CSRNP2
PPP1R18
NRM
AJAP1
AIRE
LEKR1
ESRRA
CATSPERZ
EMC9
TIAL1
TSPAN5
NKIRAS2
SH3GL3
LLGL1
DCLK1
EPHA4
SHC3
STRA6
STAC3
SMARCAD1
RABGAP1L
GADD45A
SLC25A11
RNF167
ABLIM1
LONRF3
WASF1
CDC40
TPCN2
OR6C3
VEZT
FGD6
PLCH1
YLPM1
AFF1
ARID5A
RAB30
DPYSL3
CCL2
CAPZB
TBC1D23
ADGRL2
MSL2
IL7R
GABBR1
NACAD
TUT1
CNR2
SDCCAG8
CEP170
CHD7
KRBA2
TCHP
PTPN12
NWD1
ISL2
HELLS
TLL2
LRTM1
SPATC1L
TLX3
RAB23
SLC10A2
SYBU
PROM1
ANKRD40
ERGIC2
OCSTAMP
CTBP2
RNF213
PIK3C2A
PAFAH2
EXOC7
CTTNBP2NL
PLEKHB1
CCDC33
ARMC12
KLHL24
OSBPL2
PRAC2
PRAC1
DUSP29
JUP
PPME1
C2CD3
SMAGP
SP5
AP2B1
NCOA7
HSBP1L1
COPZ1
KIAA1522
LGR6
IL17RD
LNX1
VSIG10
SRP68
TMEM114
CHCHD3
TAGLN3
GJA10
ZBTB40
LHFPL4
MEF2C
SET
SPATA22
ATG9B
TRDMT1
RARB
ANKRD6
ST6GAL1
CCDC88C
C1R
ASH2L
LYPLAL1
RPL27
ZFAND3
RAB17
RRAGA
DLST
IFIT3
SFPQ
RAX
THEM4
STK32C
LRRC27
ARSG
SLC25A16
EGR3
ERVH48-1
SPATA12
CLCF1
LYPD1
H4C14
CACNA1S
CCDC167
PLEKHG5
PEA15
YEATS2
PRPS1
PDE4D
DTX2
TCAF1
PWWP2A
PRND
PES1
ITGB1
RBM20
PCDHB8
ANP32A
TCF4
SCOC
ITPK1
NEDD9
NCBP2AS2
NCBP2
ETFB
PCYT1B
MBNL3
CDC25A
ZNF627
C1QTNF7
GOLGB1
RAPGEF5
PHLDB2
AKIRIN1
FAM126A
CEP63
ANAPC13
SEC14L5
E2F7
TMEFF1
RESF1
CMTM4
CUEDC1
NR6A1
ROR1