ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8026055 | hESC WIBR3
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◣ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

DUX4
CDX2
REST
SOX6
FRG2C
ARHGEF38
NTRK2
SMARCA2
OTX2
TMPRSS11E
RPH3A
NES
MTF2
DPPA5
SOCS3
ZNF436
SACS
GIMAP5
FIGNL2
SOX2
AGO1
FAM227A
CBY1
NAV2
GOLGA6D
PIPOX
TCF7L1
CACHD1
FRG2
CER1
PPP1R16B
CD99L2
METTL11B
OBI1
LRRN1
DNMT3B
ZNF775
FZD5
SRRM4
EMD
MTM1
LMCD1
PF4
PPBP
EDDM3B
FGD3
STRA6
AIFM1
DNMBP
TNC
RMND5B
PHC1
SFRP2
MUC1
MTRNR2L8
FBXW11
FAM222B
CARHSP1
USP44
LIMCH1
ERBB2
PGAP3
ACSL1
KDM2B
NFE2L3
CCDC169-SOHLH2
CCDC169
BCOR
LIN28B
TRIB2
ID1
ADAM28
SP5
ZNF483
LEFTY1
ITPRIP
SHCBP1L
MTHFD1L
SLTM
LLGL1
COL23A1
SHISA5
CEP41
KLHL4
CLDN9
PLPP2
ANKRD1
ECE1
TGIF2-RAB5IF
TGIF2
TRIM24
TTYH1
RAX
CLCF1
FAM126A
OR5AR1
KLF6
SLC7A5
BTG2
RNF213
RARG
HESX1
BFSP1
LEFTY2
DHX32
ZFHX3
ID3
MRPL20
TLL2
GXYLT2
RFX4
FBP1
ESRP1
FRAT2
IER5L
FZD8
PPME1
C2CD3
NFE2
FGFR2
PRICKLE1
POU5F1
RCN1
LRMDA
SOX14
RAB25
MDN1
DUSP6
SAMD5
L1TD1
GAD2
SGMS2
PNCK
SLC6A8
NANOG
ARHGAP10
GPSM3
TRIML2
PTPN12
ABHD11
AKIRIN1
NRG1
NEUROG3
FGF1
NDUFS5
NRCAM
GLIPR2
SAMHD1
TALDO1
FGF2
SLN
CYP2S1
HDAC9
SASH1
ROR1
PILRA
PDE1B
ESX1
PTMA
AHCYL2
GSN
VENTX
FZD2
TRAPPC8
PRDM14
PES1
TCN2
DDX17
BRINP2
KCNJ1
GSPT2
EPHA4
GNAI2
SDCBP
PRKCA
DMTN
IFRD1
LIPK
WBP1L
GCSAM
MAD2L2
DRAXIN
MOBP
GADD45G
MYSM1
RGS3
FOXD1
DOK7
NDST1
FAM24B
SMAD3
ZCCHC12
ALPL
XPNPEP2
SNRPN
WFDC8
SNURF
DENR
USP7
ADA2
SELPLG
ERMN
MBNL3
DPPA4
APOBEC3F
BBC3
LRRTM3
PLAGL1
OLFML3
WDR36
SET
PHF3
USP17L15
MFSD4B
ACCS
ZSWIM3
ACOT8
DHDDS
AEBP2
PTGS1
EEF1A1
DPH6
SPATA45
ETV4
SALL3
PREP
BEND3
SRCIN1
FZD10
ARSD
LFNG
GJA1
ISOC2
DCLK1
DLX6
PSMG3
ZNF438
PPP1R18
NRM
FGD4
TACC2
RPSA
DAGLB
RHBDD2
TMEM132B
NEDD9
TRPM3
FZR1
FAM180A
NADK
DUSP12
CEP131
WASF1
CDC40
GPR149
SLFN12
DTX2
MACROH2A1
RTN4
MAP6
PKNOX2
NTN1
FAT1
TFAP2A
LZTS1
TIMP4
KDM3A
ARMC12
NECTIN1
PRND
GOLGA6A
AMN1
SLC4A2
CDK5
CHFR
PDPN
UTF1
RASGRF2
MYCL
RSPO1
PMEPA1
BFAR
ST18
SYNPO2
PODXL
AFF1
RIF1
USP17L20
USP17L22
PDCL
ST6GAL1
PSMD9
HPD
WDR74
ACVR1
ANK2
PCDH8
MYBPH
ETV1
SLC2A14
HOXD13
HOXD12
TBC1D16
NDUFAB1
TMEM43
CHCHD4
USP17L21
USP17L18
USP17L12
USP17L11
PIN4
TSPAN14
IL34
WDR49
BAHCC1
RPRM
AASDH
MRS2
NDUFV1
SYAP1
LYPD1
PRRC2B
DGLUCY
TLE1
PIK3R3
PALM2AKAP2
TRIM71
CRX
NRARP
MAMDC2
ZSCAN2
HMGB1
NDUFB5
MRPL47
MTRNR2L1
MUC3A
GDF11
FLAD1
MED25
FUZ
SMCO1
GRK6
NOTCH1
ARID2
MED12
ZNF608
TDGF1
ZNF398
ETS1
RIIAD1
SCGB3A2
DDX43
VCAN
ZNF343
GOLGA6B
CCDC200
SNX16
NCDN
KIAA0319L
CELF3
CELF4
CYP1A1
FAM120B
HES3
ICMT
PHF5A
ACO2
GPRC5B
MTRNR2L2
MSH3
DHFR
TRIM48
KMT2B
PARP1
GOLGA6C
SLA2
SOX5
MCCC1
CYTH2
KIFBP
CDC42EP3
FBXL19
FBXO40
PER2
TRIM2
TRIP4
TMCC1
DND1
SLC35A5
TMEM41B
ATG3
FOXP1
RASA1
HGS
ARL16
WNT5B
IQCH
AAGAB
ZNF532
CRYGB
SPIC
SNAPC3
ZFC3H1
THAP2
LINGO1
JPT1
APOBEC3D
APOBEC3C
CCT2
SCAF4
SPRY4
PREX2
SYT2
POSTN
UNC13B
TMC5
CDC14B
PRR15
ECT2
PCBP1
TUBB
MDC1
ALDH1A2
AASS
DCAF4L1
PCLAF
ONECUT2
DDR1
ITGB5
VOPP1
ZNF335
GDF3
LRRTM4
CAPRIN1
KCNN2
FAM200B
DLL1
VWCE
TES
HMOX1
GABRQ
ZSCAN10
WDFY2
SRSF7
HBG2
IFT80
GET3
SH3BP4
TNRC18
ARIH1
ITGB3
PEAK1
HMG20A
SORBS2
KDM2A
NEBL
LOC100129484
CCDC130
MOG
TJP2
SLC39A8
MAST4
STK31
ZNF781
TIAM2
SENP2
CACNA2D1
WDHD1
SOCS4
SYN3
EXT1
ZNF304
PUF60
TGIF1
MMACHC
C8orf58
AK4
PYCR2
DDX3X
GCNT2
GTF2I
PNRC1
DST
LYPD6B
UGT1A6
SLC46A1
CHN2
ALDH7A1
RBFOX2
C10orf95
SINHCAF
SNX19
PLEKHG1
UNK
AKIRIN2
H3-3B
PTAR1
ZNF536
TNFSF8
GABRB3
KRT8
OAZ2
ABCB5
SEC22B
CAPN3
ADAR
ZCCHC3
TOMM40
TMEM47
VANGL2
SLC20A2
PACSIN2
ABL2
LRIG1
ESR2
CAMTA1
EMSY
C20orf96
PGPEP1
ZNF296
GEMIN7
C1orf127
PSME3IP1
SHF
TSKS
AP2A1
PSIP1
LIN28A
UFD1
CDC45
RASAL2
PXMP4
HHIP
KLF3
CHD6
UBAP2
CCN2
FXYD5
HES1
REV3L
ZNF565
PITPNM2
DIDO1
AUH
RTBDN
MAST1
SIX2
ZBTB45
CCL26
GLDC
SLC33A1
NPSR1
LMNA
TPST2
DET1
MVB12A
TIAM1
TESK2
PRKAG2
PDIA4
FAM20A
INSM1
ZNF600
TRPC4AP
SLAMF1
SLC3A2
TCF7L2
SLC23A2
TFE3
ZNF649
KLF7
TMUB2
ZNF195
RPL8
BCL9
ATP6V1G1
ZNF664-RFLNA
ZNF664
CCDC92
SUCO
PPP2R3A
RMND1
ARMT1
NTN5
MARCKS
PXDC1
PRODH
LOC102724788
ZNF875
VPS37B
F11R
SMIM14
CDH10
SLC25A36
FOXO6
CHMP7
MAGEB2
PGBD5
TRPM1
CNOT11
LRAT
SOAT1
CTNNA1
SPHK1
LRRTM2
PYGB
FAM153B
PDGFA
RNASE9
TNRC6A
LRRC47
LIMK2
ABCC10
DISP3
VASH2
MSANTD4
SAPCD2
KLF5
H3C15
H3C14
H2AC19
H2AC18
CNGA1
STMN1
STOX2
B3GALT5
NUP160
CFLAR
ZSCAN9
ZBTB18
SLC16A13
MUS81
CFL1
PGK1
OSBPL1A
BIN2
BCAT1
MMP10
ZNF428
EPB41L1
CRISPLD1
MTHFD1
KCNIP4
ZMAT2
YIPF4
ZFP3
CSF2RB
PAK1
INO80D
PLPP3
TET3
ZNF552
ZNF517
DACT3
CDYL
NXPH2
GSAP
ARHGAP42
APOBEC3G
NIPAL1
GAST
CCDC85A
S100A16
ACOXL
CFAP20
G3BP1
ETV6
CPT1A
LRGUK
YAF2
KRTAP3-1
SACM1L
DICER1
ZNF202
CELSR3
TNFRSF6B
DTNA
ABCC2
F11
SORT1
DEFB114
DEFB113
BORCS6
TRMT2A
RANBP1
SYNCRIP
DPP3
IFI16
EXOSC9
ZNF814
TKT
GLI2
PTPRN
TP53
ASIP
GPC4
OR2T1
CXADR
RFLNA
SLCO5A1
OGA
TOX3
SAXO1
POLB
MRPL18
CAAP1
DHRS3
NUAK1
MBOAT2
SDHC
UBQLN4
LAMTOR2
DDX39A
CD200
SALL4
NEPRO
EPHB3
HMGN1
ARSL
DNAJC7
CTNND2
ANAPC15
PSME2
CD2BP2
HOXB1
KNTC1
GALNT8
MEX3D
SNAP23
TRIM13
C22orf39
MEIS2
SPTLC2
ACSL6
UPF1
PIF1
MYEOV
HSPH1
DHX8
HES5
PANK4
CSRNP2
AJAP1
AIRE
LEKR1
ESRRA
CATSPERZ
EMC9
TIAL1
TSPAN5
NKIRAS2
SH3GL3
SHC3
STAC3
SMARCAD1
RABGAP1L
GADD45A
SLC25A11
RNF167
ABLIM1
LONRF3
TPCN2
OR6C3
VEZT
FGD6
PLCH1
YLPM1
ARID5A
TLE3
RAB30
DPYSL3
CCL2
CAPZB
TBC1D23
ADGRL2
MSL2
IL7R
GABBR1
CNMD
NACAD
ZFYVE1
TUT1
CNR2
SDCCAG8
CEP170
CHD7
KRBA2
TCHP
NWD1
ISL2
HELLS
LRTM1
SPATC1L
RNF43
TLX3
GUCA1A
RAB23
SLC10A2
SYBU
PROM1
ANKRD40
FOXN3
ERGIC2
OCSTAMP
CTBP2
PIK3C2A
PAFAH2
EXOC7
CTTNBP2NL
PLEKHB1
CCDC33
C1orf198
KLHL24
OSBPL2
PRAC2
PRAC1
DUSP29
JUP
SMAGP
AP2B1
NCOA7
HSBP1L1
COPZ1
KIAA1522
LGR6
IL17RD
LNX1
VSIG10
SRP68
TMEM114
CHCHD3
TAGLN3
GJA10
ZBTB40
LHFPL4
MEF2C
SPATA22
ATG9B
TRDMT1
RARB
ANKRD6
CCDC88C
C1R
ASH2L
LYPLAL1
RPL27
ZFAND3
RAD54B
RAB17
RRAGA
DLST
IFIT3
SFPQ
THEM4
STK32C
LRRC27
ARSG
SLC25A16
RGPD1
EGR3
ERVH48-1
SPATA12
H4C14
CACNA1S
CCDC167
PLEKHG5
PEA15
YEATS2
PRPS1
PDE4D
TCAF1
PWWP2A
ITGB1
RBM20
PCDHB8
ANP32A
TCF4
SCOC
ITPK1
NCBP2AS2
NCBP2
ETFB
PCYT1B
CDC25A
ZNF627
C1QTNF7
GOLGB1
RAPGEF5
PHLDB2
NKX1-2
CEP63
ANAPC13
SEC14L5
E2F7
TMEFF1
RESF1
CMTM4
CUEDC1
NR6A1
TMEM107
MATR3
ZDHHC5
GABPB2
RBM39
ZSWIM4
NATD1
ETV5
FGF4
RNF19A
TRIM22
MTUS1
KRT6B
TRIM5
GALNT3
PCDHB16
MDK
OAT
FZD7
ARHGAP19
ZNF318
SPAG9
EPB41L4B
UHRF1BP1L
RBBP9
ABCB8
ZBTB8OS
RBBP4
ENO1
ADRM1
RGPD2
ZFP64
WDR44
IGBP1
TMX2
MED19
MANSC1
HEXIM2
FAM181A
NFYC
CNP
ZFAND6
ZBTB2
RASSF8
CDC42EP4
HEY2
NRXN1
TIA1
ZFP36L1
THRB
JAG1
CNKSR3
MOSPD3
TBL1XR1
ARF4
MIDEAS
PIMREG
KIAA0895L
FGF19
SKIDA1
PHC2
SULT6B1
HNRNPDL
GATA3
EP300
ENOPH1
PYGM
FSBP
TSNAXIP1
RANBP10
ANKHD1-EIF4EBP3
ANKHD1
NARF
DNAJB1
SUFU
ACTR1A
PDHA2
TP53INP1
ATAT1
IPO11
CYB5R2
SCHIP1
TRIT1
HBP1
LHFPL5
CLPS
EPB41L2
PCDHB5
HECW1
PCDHGB2
PCDHGA5
SLC38A9
GDF5
HLTF
ZNF90
STX16
CNN3
AGL
SPRY2
TMPRSS9
ZIC4