ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10407083 | Esophageal squamous carcinoma cell line
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◣ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
TGIF1
PYCR2
NAV2
MYEOV
SMIM3
SINHCAF
NDUFB5
MRPL47
MTF2
MED25
FUZ
FAM227A
CBY1
CDC42EP3
PTMA
CAPNS2
LFNG
PLPP2
PDE4DIP
CLCF1
HMGB1
FHL2
RFLNA
FBXL19
VWCE
ZSCAN2
NOTCH1
TMEM200C
OR7A10
WDR74
CDH13
MAP3K2
NEUROD1
NDST1
PHLDB2
SRI
DST
PTPRH
IQCH
AAGAB
VAMP5
PUS10
PEX13
GLI2
CUEDC1
KMT2B
ERGIC2
HNF4A
STK31
CYP1A1
PTGFRN
LYPD1
ARHGAP5
ABCC1
MBLAC1
CEP63
ANAPC13
ABCC2
DNM1L
TRPV4
CASQ2
MYL12A
F11R
VOPP1
CELA3B
MAST4
CLOCK
CPNE2
DDX17
GPR39
LRRC25
ID3
MAP3K20
WDFY2
PHACTR2
H4C14
SHISA7
HGS
ARL16
CHD6
SYBU
FGD3
ABLIM1
TMEM107
KRT6A
DPP3
GRK6
MAMDC2
LIMK2
IRAG2
ITPRIP
RALGDS
CBLC
IL1F10
MUC1
PLA2G6
PER2
MS4A2
HAO2
AGPS
TMEM205
CCDC159
RAB3D
IFRD1
NEBL
ISL2
CNP
MUS81
CFL1
OGA
DENR
CPT1A
LYRM1
DCUN1D3
SPRY4
MBP
FGF19
GREB1
MCM7
AP4M1
CA6
FAM220A
C16orf74
SLC33A1
ST8SIA1
PHF5A
ACO2
TRIM48
SPTSSA
FRY
TMEM88B
ANKRD65
OPHN1
ARIH1
RGS2
ZNF57
HIPK1
RHOBTB2
HES1
VIT
MCCC1
VAPA
HSD17B3
FAM50B
GFM2
SYT2
LOC100509620
DOCK5
KRT15
ZFC3H1
THAP2
NDUFS5
PSME3IP1
PIF1
H4C15
RSPRY1
TNFRSF21
AMN1
RNF13
BCAS1
DCLRE1B
AP4B1
SPHK1
ITGB1
NDE1
MARF1
HERPUD2
LOC105370980
MEF2C
CCDC88A
ST6GALNAC2
KIAA0040
DAPP1
RBFOX2
ZNF428
JMJD7-PLA2G4B
JMJD7
SLC7A5
PRR15
ALDH7A1
OGT
UNK
H3-3B
ACP3
TINAGL1
SLC12A7
DNAH5
DCTN1
CYP2S1
CHD9
FOXJ3
TAGAP
SMCO1
NTMT1
G3BP1
PKP2
TPRKB
TMCC1
ARNTL2
MRPL21
IGHMBP2
SPATS2L
FURIN
RTBDN
MAST1
SLC25A11
RNF167
ZNF37A
CCL26
VASH2
PTPRM
SPINT1
EIF2AK4
TNFAIP8
MELTF
MTRNR2L1
TLX3
PTCHD4
CDK12
DNASE1L2
IPO4
TMEM154
AHCY
NRCAM
EFHC1
MT1B
MYL12B
EGFR
FZR1
RBM39
XCR1
HDAC9
WBP11
C12orf60
NPIPB12
FAM107B
CLDN17
LECT2
CAPRIN1
TJP2
ZNF710
HID1
OLFML2A
COPS7A
CFAP54
NIBAN2
PTHLH
SIX2
MAP3K9
TSNAXIP1
RANBP10
EVA1A
BCL9
NCBP2AS2
NCBP2
ELFN2
FZD1
PRKAB2
DENND4A
NPIPA3
NPIPA2
SUFU
ACTR1A
OARD1
NFYA
ECT2
LAMP1
AHNAK2
GET3
SVIL
CCDC192
NR1D1
ARPC1A
COA6
RASA3
ESRP1
IFT80
KDM2A
SMC4
GDF5
CEP250
RAB5C
FAM83G
IL23R
KDM3A
PIK3C2G
SLC20A2
AKAP9
TTF2
HNRNPC
SLC25A45
FRMD8
OLFML3
OAZ2
TSPAN14
SLC16A13
TOMM40L
APOA2
N4BP1
CTNNAL1
SLC39A12
ZNF608
TIA1
MKKS
SLX4IP
KLRK1
NUP160
JUP
CNIH4
RAPGEFL1
SPATA12
SLC22A23
ADGRG1
TMUB2
PRUNE2
CDCP2
KNTC1
TBC1D17
AKT1S1
NDUFS2
ADAMTS4
HNRNPDL
ENOPH1
RPS6KB2
ANKRD36C
MTHFD1L
TFB1M
ATXN1
PSME2
EMC9
ITGBL1
RBBP8NL
NINJ2
FIGNL1
CDHR2
SHF
AADAC
KPNA4
TMEM41B
ZSCAN9
FLNB
ANO1
ADGRF4
PDIA4
KLHL24
MTMR1
CLSPN
ABCC10
CD2BP2
SH3GL3
VGF
SPRED2
EIF1AD
BANF1
APOBEC3B
SMAD3
ZNF195
POLG
POLDIP3
G3BP2
C2CD5
EXPH5
ETV1
ACSL1
MTUS1
NFIB
CFAP20
KRTAP3-1
MAP4
ZNF775
SOX6
PLEKHG1
C11orf58
MTRNR2L8
CYTH2
BORCS6
TBX4
BCAS2
LMNTD1
ALKBH8
ASB5
ETV4
FOXP1
ING4
MOB3C
OTUB2
STAMBP
ZNF785
SPAG4
LGALS8
DVL3
CCDC33
SIPA1L1
H4C12
ADH5
LDHB
NCOA4
METRN
IL4R
PKM
MMP10
PGBD2
CTXN3
PIN4
SPAG9
ZBTB6
SUN1
GNAL
SRGAP2B
MICAL2
PRDM10
CTSV
RIN1
SOX9
PACSIN2
SAPCD2
CSDE1
UAP1L1
NEK10
CDCA4
CCDC30
SPINK1
ENSA
FAM83B
DHX8
PSMD3
HMGCS1
DGKZ
YLPM1
INPP4B
PHAX
WDR36
SDCCAG8
CEP170
SFPQ
SIGLEC15
MTRNR2L2
MSH3
DHFR
SNAP23
ZNF106
LTBP2
MAN1A2
NUTM2F
RNF43
SIRT4
KLK6
UBR2
IRF2BP2
GUCA1B
KSR1
DCUN1D2
MSANTD4
ETV5
INTS9
HMBOX1
ZCCHC14
LNX1
H2AJ
YARS2
SCNN1A
LTBR
RIPOR3
NDUFS8
DMRT2
SH3RF3
CNKSR1
TBC1D31
EIF3E
ASCC2
IL31RA
TUBB8
ARSG
FJX1
LRRC23
PPP1R3G
FGF1
GBA
H4C9
NFE2L2
ATG2A
TOMM40
PCCA
NCEH1
ATP1A1
KRT33A
SESTD1
NPB
WBP1L
LMNA
RPL27
HSPA13
SLC25A25
WDR33
SFR1
ZNF268
AP2B1
CWC22
SART1
TCTEX1D2
GPR150
ST6GALNAC4
CDK5RAP2
STON1-GTF2A1L
STON1
LOC100505841
GPR68
DIABLO
PGM2L1
MIA3
NPIPB6
WFDC3
DNTTIP1
UFD1
CDC45
SMO
PTCRA
BAHCC1
ANKRD36
NUDT19
BCL9L
GPR87
HSPH1
UQCRQ
GDF9
CCDC146
PHB2
COMMD2
TLE3
SRP54
CTTN
VWA5B2
CNKSR3
ZCCHC8
TRIP4
NPDC1
ANXA2
OR10S1
NFKBIA
TUT1
C1QTNF7
VDAC2
C12orf71
KBTBD6
CCT2
PIK3R3
EPHB3
KIAA0895L
ATAD2
NDUFS7
PRORP
PPP2R3C
ANKRD13D
CLDN16
DNAJB1
MAP3K7
MYO6
TECR
SLC25A32
DCAF13
UPP1
DDX5
CEP95
LOC105372977
PARP2
TENM2
ZFX
EGR3
HEXIM2
CLCN3
TMEM221
C19orf33
YWHAG
OSCP1
MTMR11
PRMT5
MAP2K1
GGT1
MIOS
GSN
KCNJ15
H2BC8
H2AC8
DAD1
SOST
MRPS23
EMP1
GOLGB1
GLI3
ASB2
TRDMT1
MAGT1
COX7B
PUS7L
IRAK4
COX8A
RFFL
PLD1
MLPH
TTC6
FOXA1
EPB41L4B
PLK3
SMPD3
CAPS
ARSD
BAZ1B
MTA3
KCNG3
C11orf65
ABCC3
ALOX5AP
SNRNP35
KLF1
GCDH
H4C3
H1-6
CREBL2
PTPN6
C12orf57
PTPN3
NKIRAS1
NR1D2
TSKS
AP2A1
DUX4
SMARCA2
REST
CDX2
SOX2
NES
TMPRSS11E
DPPA5
SACS
ARHGEF38
FRG2C
PIPOX
OTX2
ZNF483
METTL11B
DNMBP
CACHD1
AGO1
DUSP6
NRG1
TCF7L1
RMND5B
ANKRD1
CD99L2
LRRN1
SFRP2
GOLGA6D
NTRK2
SOCS3
MUC3A
GIMAP5
FAM222B
SPATA45
PF4
GDF11
BCOR
PHC1
PPBP
SHCBP1L
MFSD4B
SNRPN
PRICKLE1
OBI1
SAMHD1
RPH3A
SRRM4
BTG2
LMCD1
OR5AR1
GAD2
FLAD1
ZSWIM3
ACOT8
CLDN9
POU5F1
EDDM3B
SLTM
APOBEC3F
FBXW11
TALDO1
FRG2
ARID2
DNMT3B
MED12
ZFHX3
TDGF1
ABHD11
HESX1
MOBP
SHISA5
RASGRF2
VENTX
ZNF398
MRPL20
NADK
ETS1
NFE2L3
RIIAD1
SCGB3A2
PMEPA1
DDX43
UTF1
WFDC8
PSMD9
HPD
NANOG
VCAN
ZNF343
RCN1
COL23A1
GOLGA6B
CCDC200
SNX16
NCDN
KIAA0319L
FGD4
LEFTY2
GOLGA6A
CELF3
TRAPPC8
LZTS1
CER1
CELF4
IER5L
DAGLB
USP44
GADD45G
MYSM1
TRIM24
FGFR2
ADAM28
FAM120B
HES3
ICMT
FZD8
FIGNL2
FBP1
GPRC5B
LIN28B
FGF2
GNAI2
PARP1
PPP1R16B
SNURF
GOLGA6C
SLA2
RIF1
SOX5
GPSM3
IL34
KIFBP
FRAT2
MRS2
SGMS2
LEFTY1
SAMD5
FBXO40
TRIM2
PALM2AKAP2
DHDDS
DND1
SLC35A5
MACROH2A1
ATG3
RASA1
PRDM14
FZD2
HOXD13
HOXD12
CCDC169-SOHLH2
CCDC169
WNT5B
LIPK
LRRTM3
ZNF532
PLAGL1
CRYGB
SPIC
SNAPC3
SLC2A14
ECE1
MDN1
LINGO1
JPT1
TRIML2
PDPN
GJA1
APOBEC3D
APOBEC3C
GXYLT2
MAD2L2
SCAF4
LIMCH1
PREX2
ST18
POSTN
BEND3
UNC13B
PDCL
RFX4
TMC5
CDC14B
DHX32
SOX14
CEP41
DGLUCY
CHFR
PCBP1
TGIF2-RAB5IF
TGIF2
TUBB
MDC1
ALDH1A2
AASS
DCAF4L1
BFSP1
PCLAF
ONECUT2
ZNF436
DDR1
FAM180A
ITGB5
DRAXIN
MTM1
SALL3
ZNF335
EEF1A1
GDF3
LRRTM4
KCNN2
FAM200B
DLL1
L1TD1
TES
HMOX1
GABRQ
ZSCAN10
TIMP4
DPH6
FOXD1
SRCIN1
SRSF7
HBG2
RTN4
ADA2
SH3BP4
TNRC18
TBC1D16
CARHSP1
ITGB3
NDUFV1
KDM2B
PEAK1
HMG20A
SORBS2
LOC100129484
CCDC130
MOG
SLC39A8
ZNF781
ISOC2
TIAM2
SENP2
CACNA2D1
WDHD1
SOCS4
SYN3
EXT1
ZNF304
PUF60
SASH1
MMACHC
DUSP12
AHCYL2
USP7
NDUFAB1
C8orf58
TNC
AK4
WDR49
DDX3X
GCNT2
GTF2I
PNRC1
LYPD6B
UGT1A6
SLC46A1
CHN2
KCNJ1
RGS3
C10orf95
SNX19
AEBP2
AKIRIN2
PTAR1
ACVR1
ZNF536
TNFSF8
GABRB3
KRT8
ANK2
ABCB5
SEC22B
CAPN3
ADAR
ZCCHC3
TMEM47
VANGL2
TTYH1
DOK7
ABL2
LRIG1
ESR2
CAMTA1
EMSY
C20orf96
PGPEP1
ZNF296
GEMIN7
C1orf127
FAM24B
PSIP1
LIN28A
FZD5
TRIB2
NECTIN1
RASAL2
PXMP4
HHIP
KLF3
UBAP2
CCN2
PDE1B
FXYD5
REV3L
AASDH
ZNF565
PITPNM2
DIDO1
AUH
ZBTB45
GLDC
NPSR1
TPST2
DET1
TMEM43
MVB12A
CHCHD4
TIAM1
TESK2
PRKAG2
FAM20A
INSM1
ZNF600
TRPC4AP
SLAMF1
MYCL
SLC3A2
TCF7L2
SLC23A2
TFE3
ZNF649
KLF7
SLFN12
DPPA4
RPL8
ATP6V1G1
ZNF664-RFLNA
ZNF664
CCDC92
SUCO
PPP2R3A
PRRC2B
RMND1
ARMT1
NTN5
MARCKS
PXDC1
PRODH
LOC102724788
ZNF875
VPS37B
SMIM14
TLE1
CDH10
SLC25A36
FOXO6
CHMP7
MAGEB2
NEUROG3
PGBD5
TRPM1
CNOT11
LRAT