ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6852814 | LK-2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◣ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
PTMA
FAM227A
CBY1
KIAA2012
RIIAD1
CELF3
GABPB2
STC1
ALDH1A1
SRP68
MTF2
VWCE
BCL9
NOTCH1
EPYC
NTN5
APOD
LFNG
NAV2
GEMIN4
NDUFB5
MRPL47
CDX2
ARID2
MATR3
MED25
FUZ
PRSS23
PYM1
DGKA
RGS2
EPHX3
ANKHD1-EIF4EBP3
ANKHD1
LINGO4
STK31
MAMDC2
ZSCAN2
SLC20A2
LMO3
CTNNA1
LRRTM2
SMARCA2
PRR15
GGH
FOXP1
GRK6
KRTAP19-2
KRTAP19-1
CDH12
IQCH
AAGAB
DUX4
ANKRD6
TJP2
PIPOX
C1QTNF7
HDAC4
HMGB1
SLC12A7
IFRD1
SH3GL3
CYP1A1
CLEC4F
TMEM17
ZNF750
VAV3
SNAPC3
ABCB10
CEP85L
SLCO5A1
TPRG1
CLEC9A
PLEKHG1
ETV3
LRP12
TLX3
DDX17
C2CD4D
TARS3
LIMK2
PLPP2
HAUS6
EHD4
ETV1
TMCC1
ANKRD44
GCNT1
ID3
HGS
ARL16
TES
ZDHHC3
EXOSC7
KCNA6
PER2
POLI
H3C6
AMN1
ARIH1
HAO2
ADAM28
PGRMC2
SOX14
AP1M1
WFDC13
WFDC10B
KMT2B
HOXA9
LYPLAL1
UNK
H3-3B
PLA1A
MLLT11
CDC42SE1
PHF5A
ACO2
ESYT3
UGT1A5
KRTAP3-1
BAHCC1
FBXL19
OR4N4
CEMIP2
ZNF775
PPFIBP1
GLI2
CCPG1
C15orf65
NUP160
TRIB3
SINHCAF
SH3BP4
CSTB
TRIP11
H4C14
GRAMD4
DPYSL3
NPY4R2
NPY4R
RTBDN
MAST1
CAST
NARF
TMEM68
TGS1
ESRRA
CATSPERZ
NADK
LINGO1
LAMC1
MARCKS
C3orf20
PRDX1
CLRN3
TRPC3
CLUAP1
YEATS2
H4C15
HDAC9
WFDC8
MSANTD4
KIAA0040
ZNF335
TSKU
PRKAB2
KDM2A
HPS4
ARHGAP24
MAD2L1BP
GTPBP2
GTF3C3
ZFC3H1
THAP2
CCT2
MAST4
AUH
LMNA
LOC100506422
RNF217
CHRM3
RFLNA
RORC
IL21
SYNE2
ONECUT2
SLC33A1
RNF20
KRT23
PTGR1
NRCAM
ESRP1
ZSCAN10
SEPTIN9
PLK2
ROCK2
GOLPH3L
TLE1
KDM3A
AKIRIN2
C6orf132
ZNF428
PTCH1
MUS81
CFL1
MAP3K9
RFX5
MTUS1
MFSD4B
SHC3
ID2
ECT2
HNRNPLL
NDUFS5
BORCS6
PPME1
C2CD3
LRATD2
SPRY4
ZNRF3
RAB23
HES3
ICMT
NACAD
TBL1XR1
ZNF195
ITGB4
DISC1
EGFLAM
POLB
HMGN1
ZMAT4
ZNF687
HCRTR2
CEP68
CDC42SE2
SIX2
NRP2
KLF6
HOXB9
CDH18
TPD52L1
LCE3A
FRA10AC1
FIGLA
CAV2
FOXP2
ZBTB6
C1orf100
SRGAP2B
ATXN1
SRGAP2C
RIN2
SH2B2
LRP1B
SLC39A8
LTBP1
NDE1
MARF1
PI4KB
CGN
IL31RA
MEX3D
PLCH1
TRIB1
UBTD2
ZBTB45
USP39
AGPS
LTK
PDZRN3
KCNN2
PDP1
JMJD7-PLA2G4B
JMJD7
CLCF1
COX20
KNTC1
BCL2L11
DUSP12
CYTH2
ADD2
FTH1
ZFP69B
PDIK1L
EIF4EBP1
PGK1
AKAP6
NUCKS1
ZNF608
MACROH2A1
OAZ2
GOLGB1
PSMB7
VCAM1
SYBU
STON1-GTF2A1L
STON1
CEMIP
ABHD11
TPST2
TNFAIP2
FIGNL1
SCNM1
LYSMD1
CRTAP
SLC25A36
DPP3
TIAL1
ST6GAL1
SRI
DDAH1
TAS2R50
SRGAP1
ACTR2
FGF1
ETV4
SDHC
CPT1A
ELF1
UTP25
WBP4
TRAK2
STRADB
RSF1
AAMDC
CDK5R1
POGZ
RPS11
PIF1
TLR4
GADD45G
SHF
F11R
SNX27
HHIPL2
DCSTAMP
MBLAC1
SNRPN
SNURF
SNAP23
ZNF106
TMEM132A
ADH5
TMEM211
DST
CRISPLD1
LIMCH1
CAPRIN1
LMCD1
PIK3R3
TLE3
CUEDC1
FOXJ3
FNBP1L
H3C8
H2BC10
S100A10
RHOJ
CTSV
SPATA12
IGF1
SNTB2
CHN2
CPVL
HSPA1B
PDIA4
KANSL1L
PHIP
SC5D
LAMP1
STX6
DMRT3
ATP13A3
ZNF304
HACL1
BTD
MDM4
ARNT
MIOS
CDKN2B
ZBTB40
SCN1A
MYEOV
SPRED2
TLN2
TM4SF20
ANAPC15
CEP63
ANAPC13
TNRC18
LOC100129484
JUP
PCDHB8
PCDHB16
MANSC1
ZNF736
RAP2B
TRMT2A
RANBP1
OR2H2
ANKK1
CORO7
HMOX1
ACSL6
MRO
FBXO48
APLF
SLC30A8
PADI1
ETV6
PTPRO
AKR1C2
SEMA6C
ALDH1B1
ITPRIP
DLX5
CNIH4
FGF3
KLF7
TCF12
POLR2M
TMPRSS4
NAA40
DNAJB2
LMNTD1
SLC25A11
RNF167
SDHD
CITED2
TMCC3
RAET1L
GSN
GATA3
CDC42EP3
VANGL2
TTI2
AGTPBP1
ICOS
PMEPA1
EMSY
TMEM88B
ANKRD65
OR10S1
CHMP4C
NPTX2
RCC2
POC1A
RPA3
TIA1
FGF19
SHROOM3
ALDH3B1
AGPAT3
SELENBP1
SYT2
HES1
PIMREG
VGF
OR2T1
ST7
MNAT1
CHKB
CACHD1
MCCC1
TWIST2
LNX1
SH3D19
AMELX
PRKX
CCDC187
BBS7
ARHGAP5
EIF4A2
OR5AP2
SERTAD4
FGF18
VASH2
NEFH
OTUD7B
HSF2
UBOX5
FASTKD5
FAM83A
KCNH8
MUC15
ZDHHC5
RAI14
MID1
ZNF292
SEC24B
H3C15
H3C14
H2AC19
H2AC18
RPL27
RBM20
HSPB3
HCN4
BRD4
SCT
CDHR5
ARID5A
ADRM1
MCM7
AP4M1
VDAC2
PTP4A3
TRIM61
ZNF395
ABLIM1
KLHL24
RRBP1
NFIX
LDB1
PRDM10
ETS2
SST
TMEM41B
PIN4
SPHK1
AFAP1
LOC389199
PDE7A
ZNF184
GRAMD2A
ST8SIA1
TDRD1
METRNL
SMCO1
RCN1
FGFR2
UPF1
WASF1
CDC40
GBX2
MFSD6
DENND4A
KDM5B
SF3A2
PLEKHJ1
NDUFS8
PRUNE1
MINDY1
RASAL2
CHD6
TRIM13
FILIP1L
TPM1
ZNF346
LMO4
ANP32E
CD59
CXCL13
IFT80
CTTNBP2NL
MIDEAS
SMC4
EMP1
ZNF680
RNF187
MYPN
SYNCRIP
RABGAP1L
CEP164
OTULINL
PCBP1
OGA
TCF4
AKAP9
IP6K2
C18orf21
BHLHE40
FANCI
ANXA2
MRPL42
LY6G6D
MS4A2
CLK3
PAK6
TBC1D31
SPRING1
RNFT2
CPSF4L
CHST12
OPN3
CHML
ZSCAN9
CSRNP2
CHRNA9
THEMIS
INSM1
G3BP1
GFM2
EYA1
QSOX2
MT1X
KRT8
ZBTB2
LYRM1
DCUN1D3
LPP
SLC7A11
CDIN1
SLC26A8
MAPK14
ARHGAP39
PTGES2
MAP2
HEBP2
INTS9
HMBOX1
PFKFB3
OR13C2
PHF14
VGLL4
FOXO6
CNP
VPS50
HEPACAM2
KNL1
DMRTA2
ZNF718
ZNF595
GPER1
ZBP1
WDR74
SLC3A2
MTHFD1
GABRR2
RTRAF
ZNF268
RNF152
CBLC
NOBOX
PIP4K2C
FUCA1
IRF4
NEBL
SFPQ
C1orf54
APH1A
SLC45A4
C1orf116
AURKB
TBC1D16
TMUB2
MT1B
SGK3
PDS5B
MT1F
SACS
FZR1
ETV5
CNKSR3
TAX1BP3
EMC6
RIC8B
KDM7A
LMO2
CYP17A1
UBE2QL1
SOX6
GAD2
ERMN
TUBA1C
C11orf58
ICE1
ERV3-1-ZNF117
ERV3-1
ST3GAL4
WBP1L
KIAA0895L
CCDC88A
UXS1
CTH
HSD3B1
RGS7BP
DDX41
RHBDL2
BMERB1
RAB30
SYTL2
RADIL
POFUT1
PLAGL2
SAPCD2
ZFAND3
METTL9
RHOBTB2
PRSS56
FLNB
SERP1
EIF2A
TGIF1
PXDC1
SH3PXD2B
ALDH3A1
GFOD1
SPO11
GPSM3
KPRP
EPB41L4B
HBP1
ZNF277
DOCK4
WIPI1
RNF122
CRYGS
CAMK2N1
DDX43
ECE1
GET3
UFD1
CDC45
SEC16B
KRTAP15-1
CRCP
EIF3F
H2AZ2
EBAG9
TPGS1
TPM4
ZBTB10
MAB21L4
MALT1
SENP8
MYO9A
GOLIM4
TUBG1
RETREG3
MSRB3
BNIP2
TMEM254
GPX6
UBQLN4
LAMTOR2
SDCCAG8
CEP170
PELI1
RPS6KA2
TADA1
GAL3ST4
CADPS
OSBPL1A
ZSCAN31
PRCC
ACSS3
EP300
CDC7
SH3PXD2A
TANC1
MCC
CLDN24
CLDN22
ABHD12B
NXPE2
COL1A2
TOMM40
FRY
UBE2G1
RPL23A
RAB34
CDK5RAP2
NLK
FLACC1
CD2BP2
WDFY2
PSME2
EMC9
VEZT
FGD6
MNT
RNF31
STAP2
MPND
OR4C6
LRATD1
TBXT
CCDC200
RARB
IFITM1
IFITM2
MYO1B
PHF3
NUPR1
MOSPD3
GP5
HSPA13
GORASP2
OARD1
NFYA
TTF2
TTC23L
EXPH5
TMEM60
PHTF2
KRT6B
NKIRAS1
SLC25A25
TSPAN13
ZBED5
MEGF9
NR1D2
CLCN4
C2orf73
C7
UBALD2
INTS4
LGALS3BP
ADAMTS19
CENPC
PAFAH2
FAM72C
FAM72D
IGSF10
ZBTB8OS
RBBP4
FBRS
RDH5
BLOC1S1
ASCL4
WDR36
EGFR
PLA2G6
ZNF8
KCNK15
DNAAF1
HOXA3
COX8A
MTMR11
CDC14B
ARHGAP42
THEM4
FOCAD
ADGRL1
CYTH1
SERPINB8
EEF1A1
DEDD
ATL1
GTF2H4
CDR2
TDP2
ACOT13
IQCA1L
H2BE1
BAIAP2
RNF19B
MMP10
EEF1AKNMT
ZNF708
TGM3
MEA1
STK32B
APTX
DNAJA1
CLDN16
MOBP
PDE4DIP
SNRPC
CIART
BACE2
AKAP10
NFYC
ATR
BAZ2A
ASPM
PNRC1
PCNP
RAPGEFL1
RAI1
MAT1A
FRG2C
MIA3
TIMM10
ZNF189
MRPL50
EID1
STK32C
LRRC27
CKAP5
KIAA1217
OR2AE1
REST
SOX2
NES
TMPRSS11E
DPPA5
ARHGEF38
OTX2
ZNF483
METTL11B
DNMBP
MUC1
MTRNR2L8
AGO1
DUSP6
NRG1
TCF7L1
RMND5B
ANKRD1
CD99L2
LRRN1
MTRNR2L1
SFRP2
GOLGA6D
NTRK2
SOCS3
MUC3A
GIMAP5
FAM222B
SPATA45
PF4
GDF11
BCOR
PHC1
PPBP
SHCBP1L
PRICKLE1
OBI1
MTHFD1L
SAMHD1
RPH3A
SRRM4
BTG2
OR5AR1
FLAD1
ZSWIM3
ACOT8
CLDN9
POU5F1
EDDM3B
SLTM
APOBEC3F
FBXW11
TALDO1
FRG2
DNMT3B
MED12
ZFHX3
TDGF1
HESX1
SHISA5
SLC7A5
RASGRF2
VENTX
ZNF398
MRPL20
ETS1
NFE2L3
SCGB3A2
FGD3
UTF1
PSMD9
HPD
NANOG
VCAN
ZNF343
COL23A1
GOLGA6B
SNX16
NCDN
KIAA0319L
FGD4
LEFTY2
GOLGA6A
TRAPPC8
LZTS1
CER1
CELF4
IER5L
DAGLB
USP44
MYSM1
TRIM24
FAM120B
FZD8
FIGNL2
FBP1
GPRC5B
LIN28B
FGF2
MTRNR2L2
MSH3
DHFR
TRIM48
GNAI2
PARP1
PPP1R16B
GOLGA6C
CYP2S1
SLA2
RIF1
SOX5
IL34
KIFBP
FRAT2
MRS2