ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6852810 | HCC95
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◣ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
SMCO1
MAMDC2
PYCR2
HES1
PAMR1
MBNL1
NDUFB5
MRPL47
SOX2
CAPNS2
LMCD1
VWCE
NAV2
FJX1
GRK6
PCCA
LYRM1
DCUN1D3
MTF2
RFLNA
ABCC1
ARSG
F11R
EVA1A
TES
TNRC18
LOC100129484
GADD45G
LCLAT1
LIMK2
ZNF775
PTMA
VIT
HMGB1
MED25
FUZ
CYP1A1
NWD1
ZNF341
PSPH
CCT6A
CDC42EP3
ITGB4
FAM227A
CBY1
SLC20A2
KMT2B
MANSC1
SYT2
ANXA11
HGS
ARL16
HERPUD2
EPB41L1
PLPP2
RAG2
IFTAP
ARID2
CNP
ARID5B
JMJD7-PLA2G4B
JMJD7
NFE2L2
FGD3
UNC13B
NOTCH1
MEOX1
WDR74
SH3PXD2A
NME1
ETV1
DDX17
CEP41
CYP2S1
FBXO27
PPP3R1
DST
WDFY2
TRMT2A
RANBP1
CYP21A2
C1QTNF7
PHF5A
ACO2
PXMP4
CEMIP
RNF13
JUP
TMEM17
ADH7
ZBTB34
ABCC10
IGFBP2
SCPEP1
ST6GALNAC2
SPDL1
MMP10
TMEM132A
LAMP1
SMAP1
IQCH
AAGAB
OGN
ETV4
NDE1
MARF1
SERPIND1
IKBKB
SMCO2
ZSCAN2
HOPX
PER2
UBTD2
IFRD1
IFT80
CUEDC1
MNT
TPM1
SMC4
SAR1B
NFIB
NIBAN2
PLD1
SEM1
NINJ2
MARCKS
SUN1
PIGX
CEP19
SLC25A25
KDM5B
AADAC
KCNN2
PHACTR2
SLC7A5
PPDPF
CLDN4
ABHD11
SIX2
SEMA3D
DDX5
CEP95
MTMR1
NUP153
KIF14
ABCC2
SPAST
EHF
LFNG
DGKH
SNRPE
FIGNL1
IER3IP1
TUT7
HDAC9
EXT1
MMP11
LGALS7
NAA35
DENND4A
ZFAND3
POLR2M
MS4A2
CCT2
GALNT11
ADGRL1
THG1L
SMARCA2
DHX8
MAST4
LPP
CSTA
BST1
SHF
ESYT2
NRCAM
MCCC1
YEATS2
TUBA1C
OGA
NKIRAS1
NR1D2
ALG9
KCNJ15
PTCHD4
FOXP1
P2RY12
CCDC200
DAGLB
CHST12
GSTO1
ZNF608
GGH
BFSP1
SAPCD2
UAP1L1
RNF152
MMP13
VDAC2
ATAT1
TMUB2
SMARCAD1
KRT74
CAPRIN1
KRTAP3-1
KLHL6
ONECUT2
GPR87
ADAM28
UNK
H3-3B
MUS81
CFL1
BAHCC1
VGF
NPIPB12
TRPV4
C20orf96
TP53AIP1
RPL27
RBM39
KIAA0040
SPIN1
C3orf20
OTOGL
EIF4A2
LAPTM4B
SPTSSA
FGF1
GET3
PLEKHG1
CCL26
HMGN1
IL1F10
OR7A10
TJP2
NTN5
NELFCD
SYNCRIP
EFNB2
SH3BP4
TRMT1
NACC1
PMEPA1
PRKAB2
CLSPN
VEZT
FGD6
CTTNBP2NL
TMX2
MED19
FMN1
N4BP1
LDLRAD3
CHD6
CDH13
RAPGEFL1
DLX5
EGFR
ETFB
ABLIM1
BAG3
LAMTOR4
KIF21B
CPN1
MSANTD4
GDF5
CEP250
MUC20
CLNS1A
ZFC3H1
THAP2
ECT2
SLC9A9
POLB
ACTR2
LCE3A
SLC7A11
UBALD2
CTXN3
ISL2
ETV5
CLUAP1
CDIN1
NPIPB8
GRAMD1C
COL23A1
ESRRA
CATSPERZ
ADRM1
KRT13
H4C3
H1-6
ITPKB
TAL2
RAPGEF5
DGLUCY
TNFAIP8
ETF1
KDM2A
SCNN1A
LTBR
SOST
CHMP4B
FNIP2
KRT15
SLC6A2
DUX4
ID3
DMRTA2
PIN4
TCF12
MCM7
AP4M1
MTRNR2L8
ARHGEF19
GGT1
GSN
CRISPLD1
SNAPC3
VRK2
SPRED2
IQGAP1
MTHFD1L
RABGAP1
MEF2C
ZNF277
DOCK4
OSCP1
CERS3
RIMKLB
ALDH3A1
ZBTB40
KLHL5
PELO
ITGA1
TMEM254
TJP1
LNX1
HNRNPUL1
PALMD
SFR1
GPAT4
MTUS1
CASD1
TP63
SPRY4
TSKS
AP2A1
RNF43
RBBP9
POLR3E
STK31
DSC2
UFD1
CDC45
SPO11
NPIPB13
DNAJB1
KMT5A
TECR
LTBP2
SFXN1
RBM47
CELA3B
GNA13
ESRP1
SPTLC2
FAM83G
IL1A
PDIA4
BCO1
TIA1
CCDC43
HBP1
HLTF
EHD4
CC2D1B
COL7A1
TPST2
ABTB2
SCOC
PROSER1
NHLRC3
LOC100505841
AMN1
COA6
TGIF1
KIAA1549
SLC25A11
RNF167
STARD7
BCL2L13
ATP6V1E1
STON1-GTF2A1L
STON1
CAV1
RTP1
ALDH7A1
PHAX
ZMIZ2
ENAM
TUT1
REST
CDX2
NES
TMPRSS11E
DPPA5
SACS
SOX6
ARHGEF38
FRG2C
PIPOX
OTX2
ZNF483
METTL11B
DNMBP
MUC1
CACHD1
AGO1
DUSP6
NRG1
TCF7L1
RMND5B
ANKRD1
CD99L2
LRRN1
MTRNR2L1
SFRP2
GOLGA6D
NTRK2
SOCS3
MUC3A
GIMAP5
FAM222B
SPATA45
PF4
GDF11
BCOR
PHC1
PPBP
SHCBP1L
MFSD4B
SNRPN
PRICKLE1
OBI1
SAMHD1
RPH3A
SRRM4
BTG2
OR5AR1
GAD2
FLAD1
ZSWIM3
ACOT8
CLDN9
POU5F1
EDDM3B
SLTM
APOBEC3F
FBXW11
TALDO1
FRG2
DNMT3B
MED12
ZFHX3
TDGF1
HESX1
MOBP
SHISA5
RASGRF2
VENTX
ZNF398
MRPL20
NADK
ETS1
NFE2L3
RIIAD1
SCGB3A2
DDX43
UTF1
WFDC8
PSMD9
HPD
NANOG
VCAN
ZNF343
RCN1
GOLGA6B
SNX16
NCDN
KIAA0319L
FGD4
LEFTY2
GOLGA6A
CELF3
TRAPPC8
FZR1
LZTS1
CER1
CELF4
IER5L
USP44
MYSM1
TRIM24
FGFR2
FAM120B
HES3
ICMT
FZD8
FIGNL2
FBP1
GPRC5B
LIN28B
FGF2
MTRNR2L2
MSH3
DHFR
TRIM48
GNAI2
PARP1
PPP1R16B
SNURF
GOLGA6C
SLA2
RIF1
SOX5
GPSM3
IL34
CYTH2
KIFBP
FRAT2
MRS2
SGMS2
FBXL19
LEFTY1
SAMD5
FBXO40
TRIM2
TRIP4
PALM2AKAP2
TMCC1
DHDDS
DND1
SLC35A5
MACROH2A1
TMEM41B
ATG3
RASA1
PRDM14
FZD2
HOXD13
HOXD12
CCDC169-SOHLH2
CCDC169
WNT5B
LIPK
LRRTM3
ZNF532
PLAGL1
CRYGB
SPIC
SLC2A14
ECE1
MDN1
LINGO1
JPT1
TRIML2
PDPN
ITPRIP
GJA1
APOBEC3D
APOBEC3C
GXYLT2
MAD2L2
SCAF4
LIMCH1
PREX2
ST18
POSTN
BEND3
PDCL
RFX4
TMC5
CDC14B
PRR15
DHX32
SOX14
CHFR
PCBP1
TGIF2-RAB5IF
TGIF2
TUBB
MDC1
ALDH1A2
NDUFS5
AASS
DCAF4L1
WBP1L
PCLAF
ZNF436
DDR1
FAM180A
ITGB5
VOPP1
DRAXIN
MTM1
SALL3
ZNF335
EEF1A1
GDF3
LRRTM4
FAM200B
DLL1
L1TD1
HMOX1
GABRQ
ZSCAN10
TIMP4
DPH6
FOXD1
SRCIN1
SRSF7
OLFML3
HBG2
RTN4
ADA2
TBC1D16
ARIH1
CARHSP1
ITGB3
NDUFV1
KDM2B
PEAK1
HMG20A
SORBS2
NEBL
CCDC130
MOG
SLC39A8
ZNF781
ISOC2
TIAM2
SENP2
CACNA2D1
WDHD1
SOCS4
SYN3
ZNF304
PUF60
SASH1
DENR
MMACHC
DUSP12
AHCYL2
USP7
NDUFAB1
C8orf58
TNC
AK4
WDR49
DDX3X
GCNT2
GTF2I
PNRC1
LYPD6B
UGT1A6
SLC46A1
CHN2
KCNJ1
RGS3
RBFOX2
C10orf95
SINHCAF
NDST1
SNX19
AEBP2
AKIRIN2
PTAR1
ACVR1
ZNF536
TNFSF8
GABRB3
KRT8
OAZ2
ANK2
ABCB5
SEC22B
CAPN3
ADAR
ZCCHC3
TOMM40
TMEM47
VANGL2
TTYH1
PACSIN2
DOK7
ABL2
LRIG1
ESR2
CAMTA1
EMSY
PGPEP1
ZNF296
GEMIN7
C1orf127
FAM24B
PSME3IP1
PSIP1
LIN28A
FZD5
TRIB2
NECTIN1
RASAL2
KDM3A
HHIP
KLF3
UBAP2
CCN2
PDE1B
FXYD5
REV3L
AASDH
ZNF565
PITPNM2
DIDO1
AUH
SMAD3
RTBDN
MAST1
ZBTB45
GLDC
SLC33A1
NPSR1
LMNA
DET1
TMEM43
MVB12A
CHCHD4
TIAM1
TESK2
PRKAG2
FAM20A
INSM1
ZNF600
TRPC4AP
SLAMF1
MYCL
SLC3A2
TCF7L2
SLC23A2
TFE3
TSPAN14
ZNF649
KLF7
SLFN12
DPPA4
ZNF195
RPL8
BCL9
ATP6V1G1
ZNF664-RFLNA
ZNF664
CCDC92
SUCO
PPP2R3A
PRRC2B
RMND1
ARMT1
PXDC1
PRODH
LOC102724788
ZNF875
VPS37B
SMIM14
TLE1
CDH10
SLC25A36
FOXO6
CHMP7
MAGEB2
NEUROG3
PGBD5
TRPM1
CNOT11
WDR36
LRAT
SOAT1
CTNNA1
SPHK1
LRRTM2
PYGB
FAM153B
PDGFA
RNASE9
TNRC6A
ESX1
LRRC47
DISP3
VASH2
KLF5
BFAR
KLF6
H3C15
H3C14
H2AC19
H2AC18
CNGA1
STMN1
STOX2
B3GALT5
NUP160
CFLAR
ZSCAN9
ZBTB18
TFAP2A
SLC16A13
PGK1
MAP6
OSBPL1A
BIN2
BCAT1
ZNF428
ACSL1
MTHFD1
KCNIP4
ZMAT2
SELPLG
YIPF4
ZFP3
CSF2RB
BRINP2
PAK1
INO80D
PLPP3
TET3
ZNF552
ZNF517
DACT3
CDYL
NXPH2
PNCK
GSAP
ARHGAP42
APOBEC3G
NIPAL1
GAST
CCDC85A
S100A16
PIK3R3
ACOXL
CFAP20
G3BP1
ETV6
CPT1A
LRGUK
YAF2
SACM1L
DICER1
ZNF202
CELSR3
TNFRSF6B
DTNA
F11
SORT1
DEFB114
DEFB113
BORCS6
BBC3
DPP3
IFI16
EXOSC9
ZNF814
TKT
GLI2
PTPRN
TP53
ASIP
GPC4
OR2T1
CXADR
TACC2
SLCO5A1
TOX3
SAXO1
MRPL18
CAAP1
DHRS3
NUAK1
MBOAT2
SDCBP
SDHC
UBQLN4
LAMTOR2
DDX39A
CD200
SALL4
NEPRO
EPHB3
ARSL
DNAJC7
CTNND2
ANAPC15
PSME2
CD2BP2
HOXB1
KNTC1
ERMN
GALNT8
SLC6A8
MEX3D
SNAP23
TRIM13
ID1
C22orf39
MEIS2
ACSL6
PREP
UPF1
PIF1
MYEOV
HSPH1
HES5
PANK4
CSRNP2
PPP1R18
NRM
AJAP1
AIRE
LEKR1
EMC9
TIAL1
TSPAN5
NKIRAS2
SH3GL3
LLGL1
DCLK1
EPHA4
SHC3
STRA6
STAC3
RABGAP1L
GADD45A
LONRF3
WASF1
CDC40
TPCN2
OR6C3
PLCH1
YLPM1
ERBB2
AFF1
ARID5A
TLE3
RAB30
DPYSL3
CCL2
CAPZB
TBC1D23
ADGRL2
MSL2
IL7R
GABBR1
CNMD
NACAD
ZFYVE1
CNR2
SDCCAG8
CEP170
CHD7
KRBA2
TCHP
PTPN12
HELLS
TLL2
LRTM1
SPATC1L
TLX3
GUCA1A
RAB23
SLC10A2
SYBU
PROM1
ANKRD40
FOXN3
ERGIC2
OCSTAMP
CTBP2
RNF213
PIK3C2A
PAFAH2
EXOC7
PLEKHB1
CCDC33
C1orf198
ARMC12
KLHL24
OSBPL2
PRAC2