ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1047413 | hESC H9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◣ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

SACS
NES
PIPOX
SMARCA2
NAV2
PF4
PPBP
SOX2
HMGB1
ARHGEF38
RMND5B
SPATA45
DNMBP
MUC1
TALDO1
CDX2
SOCS3
HDAC9
LRRN1
GOLGA6B
OBI1
OTX2
DPPA5
NTRK2
AGO1
DNMT3B
GOLGA6D
TCF7L1
METTL11B
ADAM28
OR5AR1
GPRC5B
REST
RPH3A
ANKRD1
MTF2
FGF1
GOLGA6A
FAM227A
CBY1
CACHD1
ID3
MAMDC2
CYP2S1
ABHD11
FGF2
SLTM
FBXO40
POU5F1
CLDN9
GOLGA6C
LZTS1
NFE2L3
SLC7A5
SCGB3A2
CYP1A1
GIMAP5
PLPP2
SFRP2
PHF5A
ACO2
RAB17
SOX6
FGD3
DAGLB
SRRM4
FIGNL2
DUSP6
EDDM3B
PHC1
TNC
SHCBP1L
FAM222B
SAMD5
IFRD1
DHX32
TMPRSS11E
ZNF483
FBP1
NANOG
RASA1
DHDDS
LIN28B
TMEM47
GAD2
PPP1R16B
HBG2
LRRTM3
PARP1
PREX2
FAM180A
SOX5
BCOR
TNFRSF11A
NCDN
KIAA0319L
TUBB
MDC1
ZNF398
AASS
DDR1
PSMD9
HPD
LMCD1
CD99L2
ETS1
SHISA5
EXOSC9
ACVR1
SACM1L
MED25
FUZ
DEFB114
DEFB113
KDM2B
APOBEC3D
APOBEC3C
TCAF1
WDR74
CER1
CXADR
TRIB2
SLC39A8
TRIM24
GRK6
DDX17
PRICKLE1
SAMHD1
PTMA
HESX1
TOMM40
FGFR2
ERBB2
PGAP3
GTF2I
BTG2
MDN1
PXMP4
RFX4
NRXN1
LIPK
CAPZB
TSKS
AP2A1
SNRPN
ZFHX3
NADK
SORBS2
ZNF536
CACNA2D1
FAM24B
TGIF2-RAB5IF
TGIF2
ZNF296
GEMIN7
SLC2A14
SGMS2
C20orf96
SCAF4
GABRQ
MTHFD1L
ZNF304
MFSD4B
GNAI2
KCNJ1
ZSCAN2
PRR15
HES3
ICMT
GDF11
DOK7
NDUFB5
MRPL47
ZNF608
LRRTM4
TDGF1
HMOX1
RASGRF2
CARHSP1
SMIM3
NXPH2
USP44
ADA2
HGS
ARL16
ZSCAN10
ALDH7A1
MYSM1
CD2BP2
MTRNR2L8
IZUMO1
RTN4
CDC14B
FOXD1
S100A16
SLC46A1
FZR1
FAT1
ZNF428
TSPAN5
NRARP
RCN1
ZFC3H1
THAP2
RTBDN
MAST1
TNFSF8
C8orf58
SALL3
NDUFS5
ZSWIM3
ACOT8
RIIAD1
CELF3
UFD1
CDC45
TESK2
PGBD5
DMRT1
WFDC8
CCT2
FAM126A
SRCIN1
NECTIN1
NUAK1
ALDH1A2
CD200
TRAPPC8
TLL2
TLX3
IER5L
KIFBP
WDR49
LRIG1
PDPN
FGD4
BIN2
CDYL
GET3
GPSM3
MYCL
IFI16
PYDC5
RAX
PYGM
FXYD5
GADD45G
PCBP1
GDF3
DST
ATP6V1G1
ONECUT2
GALNT3
AEBP2
ARAP3
NRG1
LRRC47
HOXB1
PIF1
ARSD
FBXL19
FRAT2
CNMD
CHFR
EXOC7
BBS7
MAP6
SUCO
ANK2
TRIM13
CTNND2
IFITM2
CNOT11
RBFOX2
PDHA2
MOBP
HHIP
RAB30
CSF2RB
SULT6B1
ZNF781
HIP1R
FAM153B
TRIM22
TRIM5
YLPM1
DPH6
TCF4
BRINP2
ETV1
LLGL1
TTYH1
USP7
ABCB5
LEFTY1
DUSP29
MMP10
TRIM39
SYAP1
C7orf57
CHN2
ZNF195
LRAT
CPVL
TMEM41B
DCAF4L1
KIAA1522
RAD54B
FSBP
KLF3
SDCCAG8
CEP170
PNCK
ERMN
SLC6A8
FBXW11
ITGB5
UNK
H3-3B
SDCBP
GCLC
ACSM6
QSER1
DRD1
NOXRED1
ETV4
FZD7
B3GALT5
TRIML2
RNF213
DLST
SYNDIG1L
PSIP1
ETFB
QPRT
ZNF763
PES1
TCN2
LEFTY2
KLRC1
KCNN2
TKT
AKIRIN1
NMNAT3
ACCS
KMT2B
CELSR3
NFE2
CYTH2
PRDM14
ARHGAP42
HECW1
LINGO1
LEKR1
ROR1
CCDC88C
TARBP2
MAP3K12
TBC1D16
BCL9
PRPS1
PILRA
WDR33
PAN2
IL23A
PMEPA1
ACSL6
AJAP1
SASH1
CTSF
PXDC1
CCDC124
SLC16A13
SLC33A1
SMIM14
CSGALNACT1
PCBP4
ESRP1
ESRRA
CATSPERZ
KCNIP4
ZNF775
GJA1
GABRB3
GPR146
ETNK2
CDX1
FZD8
RAB3GAP2
CD4
ST18
CCDC85A
KNTC1
SLC2A12
GSN
VCAN
NEUROG3
CAVIN3
SHKBP1
PACSIN2
BBC3
SPATA22
RASAL2
SLC2A10
SH3BP4
TJP2
WNT6
ZNF317
EPHB3
GCSAM
ARSG
BORCS6
C1orf167
ARF4
FIBCD1
PDCL
MOSPD3
RBM39
ZNF506
ARHGEF19
ZNF665
AQP5
CPS1
RNF186
RAB15
PLA2G3
ZNF474
DDX43
AMN1
PLCH1
EGR3
WDR36
ZNF518B
ARMC3
OLFML3
AASDH
DPPA4
TBC1D1
PAIP2
SMAD3
PLEKHB1
REV3L
ZNF664-RFLNA
ZNF664
CCDC92
FAM110D
NFAT5
KDM2A
TFE3
GUCA1A
CNKSR3
SUFU
ACTR1A
SRSF7
TMCC1
SENP2
ZNF101
ATP13A1
ACSL1
PDHB
ITPRIP
CDH10
RARG
CCDC33
SDE2
RIF1
FZD2
CHD9
EPB41L3
PAK4
DGLUCY
YPEL3
TBX6
FAM155A
BEND3
BFSP1
SORT1
ART3
MUC3A
NOTCH1
EMSY
RPL27
GOLGB1
ST6GAL1
TEX50
PLEKHG5
NDST1
RNF19A
EBF3
LRGUK
SLC25A11
RNF167
NRCAM
GCNT2
PLEKHG3
ZNF484
PRR14L
ZNF202
SNX19
PTGS1
PHF23
GABARAP
TMEM31
UTF1
PTPN2
PSME3IP1
RSPRY1
SPRY4
ARMH4
STEAP3
ARID2
MAD2L2
DRAXIN
CDON
SNURF
CACNA1S
TSGA10IP
L1TD1
TGIF1
MRPL20
KLKB1
ADAR
CRYBG2
LIMK1
ARIH1
ZNF532
TFAP2A
ETV6
COX8A
MOG
TRDMT1
AUH
PCDHB8
PCDHB16
LMOD1
ZBTB45
MAGEB2
CDK17
ZCCHC3
UQCRQ
GDF9
SGCA
LOC107986453
HEY2
TRAPPC3
MAP7D1
MCM10
PBXIP1
TMC5
KDM3A
WASF1
CDC40
SEMG1
CAPRIN1
OAZ2
SCOC
KIF26A
SYT12
SPAG11B
SPAG11A
JAK2
FRS2
INTS9
HMBOX1
MTA2
PDIA4
GSAP
GSPT2
TTF2
SAXO1
RRAGA
KRT6A
ZNF35
RGS3
DTX2
ZNF436
RAG2
IFTAP
ZNF3
TES
GET4
RCAN3
MSANTD4
ESR1
PLAGL1
MTM1
ILF2
INO80D
TIA1
ZNF438
MICAL3
SALL4
ALPL
N4BP2L2
UNC13B
DUSP12
ACOXL
TIAL1
MAP3K9
LRMDA
MEX3D
TRPM3
UBD
TTC39B
ABCC2
EIF4E3
ARHGEF4
C1orf127
SLC25A36
PWWP2A
ZIC4
PDZK1IP1
NTN1
FAM200B
MARCKS
CCDC167
SPHK2
RPL18
ZNF180
PIN4
MMACHC
SH3GL3
FERMT1
SNX16
GLDC
DHX8
TRIM38
SLC24A3
NRL
OR51H1
RTKN
PCK2
RBM20
RAB36
RSPH14
FOXP1
WBP1L
SYNPO2
SF3A2
PLEKHJ1
HDAC2
DUSP13
AMOTL2
HTR1A
SFPQ
ATAT1
SHF
CPT1A
PSME2
EMC9
CTBP2
GLI2
ANAPC15
FOXN3
RAI14
SLN
NGRN
DPP10
PREP
PCYT1B
VOPP1
TIMP4
ENO1
PLAAT4
PALM2AKAP2
FOXO6
STRA6
SMPDL3B
LRFN3
ECE1
CCN2
PKNOX2
ETFDH
C4orf46
VMP1
PTRH2
AHSG
PTX3
BAZ2A
SFRP1
VEPH1
RNF24
RGCC
ZNF682
SLC29A1
MYMX
TSPAN14
SMARCAD1
GADD45A
SMCO1
DHRS3
STAC3
HELLS
WBP11
C12orf60
ZNF254
PITX2
CTBS
KDELR2
TBCA
NAT1
POLB
CCL2
IP6K2
EMD
PCDH8
CLDN23
CNN3
TMEM258
FEN1
TNFSF4
TLL1
SLC16A12
WNK3
MYO18A
FIBP
CCDC85B
ANKRD40
RHBDD2
TMEM33
CEP131
SP8
PRKRIP1
SAPCD1
PLA2G1B
C1R
TSC22D1
ASMT
SLC25A18
TTBK1
DISP3
MRPL34
DDA1
PANK2
IL34
OGA
DNAJC7
NKIRAS2
PTCD2
MRPS27
PPP2R3A
VPS37B
MTHFD1
NEMF
ANP32B
CDKL1
MACROH2A2
VASH2
CALD1
RND1
SYT16
USO1
RND2
WLS
ZNF737
LIN28A
RERE
ZCCHC14
PQBP1
TIMM17B
MCCC1
MAST4
OSTM1
MYT1
INSM1
ZNF85
AGFG2
MYBPH
C9orf62
ZNF486
TOX3
CANT1
SELENOP
ITGB3
GGPS1
ARID4B
SNAPC3
TSNAXIP1
RANBP10
HNRNPUL1
HNRNPC
ERICH6B
PACSIN3
DGKB
CSNK1A1L
HMGN1
ITM2B
EIF3F
CXCR1
TSEN2
CFAP20
LOC390877
GTF2F1
POSTN
TMEM43
CHCHD4
SHROOM3
ATXN3
MYH9
PUM1
CBR4
FAM13A
RIPK4
RGSL1
DSCC1
CDK16
TMEM237
GAST
ZFP36L1
BTBD3
ZNF561
STK3
OSR2
PEX5L
CAMTA1
NKX1-2
HSPA13
NUP205
MKKS
SOD2
SLX4IP
WTAP
FAM98A
VCP
SLAMF1
TLE1
DACT3
ERGIC2
POMGNT1
POU2F1
SPEF1
ESX1
BCAT1
AKIRIN2
CHMP7
KIAA0895L
PAG1
EFCAB8
SLC25A21
RAB4B
MIA
FAM185A
ABCB1
AFF1
BAMBI
ZNF677
VN1R2
ZNF792
ZNF814
HSBP1L1
BLOC1S4
INSYN2B
GNA13
SYN3
GPR179
LAMP5
CDHR3
CAPN3
TMUB2
UXS1
ENOX2
CELA3B
CCNB1IP1
GXYLT2
KATNAL2
CERS5
ZNF627
OR5F1
TRNP1
CCDC200
ABLIM1
FZD9
CRB2
ZSCAN12
MAPKAPK2
LCK
MACROH2A1
LIMCH1
AIFM1
PTPRZ1
PGAP2
TP53AIP1
FAM110B
ZNF43
FBLN1
DISP1
PAK1
ERVH48-1
RGS12
FAM76B
CEP57
KPNA2
CCDC77
KRTAP10-2
HNRNPDL
ENOPH1
STX16
LRRC23
REC8
OARD1
NFYA
OSGEP
APEX1
PDE7A
PTPRF
YAF2
LITAF
TPCN1
ACYP2
PSME4
PRRC2A
AIF1
PER2
SIX2
ZMAT2
ADNP
ATN1
PGAM1
WFDC1
TPST2
PPME1
C2CD3
LBP
GTF2H4
CHCHD3
ZBTB26
ZNF630
MEF2D
ZCCHC12
MRPS30
GRIN3A
KXD1
ACADM
CNNM4
ZSCAN9
G3BP1
EPB41L4B
HEXIM2
GDF5
SPIRE1
CEP250
TSPAN19
LRRIQ1
CEP164
IKZF2
IP6K1
CCDC130
CTTNBP2NL
SPAG9
EEA1
ZNF184
SELENOF
HS2ST1
SERPINA11
PELI1
KLHL4
RNF20
IGF2BP3
PRKCA
ZNF589
TRADD
HSF4
FBXL8
VRTN
HOXD13
HOXD12
ISL2
ZBED5
ZNF268
XPC
LSM3
NONO
SPEG
RNASE9
PBLD
HNRNPH3
SCD5
SUGP2
ARMC6
SOX14
WDR44
TFDP2
ATAD2
ZNF548
PRICKLE3
PPP2R5A
SHC1
CKS1B
SLCO5A1
HIP1
H4C9
MEF2A
PIAS2
UBA1
FOXL2NB
FOXL2
IGSF8
GCNT4
MED12
SPAG4