ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6750797 | MDA-MB-231
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◣ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

FRG2C
TNFRSF6B
NRARP
MUC1
FRG2
FAM227A
CBY1
SPATC1L
MTF2
COL23A1
MTRNR2L1
TSPAN19
LRRIQ1
CCDC200
EEF1A1
TMEM217
TBC1D22B
RTRAF
GALR1
CYP4F11
SDHAF4
HGC6.3
PERM1
EPN1
COX18
TMTC3
CEP290
ATP5F1E
TFB1M
WASHC4
NUDT4B
NUDT4
TICAM2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
FAM153B
FAM240C
CBWD5
CBWD3
C6orf89
PPIL1
THOC3
UBR2
NBPF1
FAM120B
RBM7
C11orf71
SRBD1
EBAG9
PPARD
SOX2
ZSCAN9
SNTB1
KIFAP3
ZFAND3
CTBS
MTMR2
ZNF322
BNIP5
CBWD6
E2F7
RAB18
CNTN5
SLC36A4
PPP1R12A
SCFD1
MAST4
FRA10AC1
TMEM71
PHF20L1
ZNF718
MOCS1
CMTR1
UTP23
GORAB
PARPBP
NUP37
RNLS
LIPJ
CHMP3
USP49
DYNC2H1
PHACTR2
OPRL1
LKAAEAR1
HMGN3
PRKG2
MTRR
FASTKD3
E2F6
TES
SNRPB2
DLST
PDE4DIP
HFM1
ZNF518A
PDGFD
LRRCC1
OR1F12
FILIP1L
TMEM14B
MAPK1IP1L
MBIP
ME3
COL19A1
POLR2J3
BPHL
WDR35
PAG1
CEP126
ANGPTL5
BAG2
SH3TC2
JRKL
CCDC82
AARS2
HDDC2
STARD4
COMMD8
OARD1
NFYA
DPYD
TDP2
ACOT13
TMED8
SAMD15
RBBP8
LMBRD1
NOTCH2
EXOG
ZHX3
TMEM260
GPAM
WDHD1
SOCS4
FANK1
C2orf73
TIMM23B
PARG
TDRD7
HLA-DRB1
SSH2
EFCAB5
ARHGAP39
ZNF451
HEATR5B
GPATCH11
DYNLRB2
METTL25
CCDC59
UTP20
GLRA3
CD83
COL6A6
SRPK1
BTBD9
PELO
ITGA1
FZD6
SMIM14
MYL12A
HLA-A
PHLDA1
NBN
ZNF330
PTCD2
MRPS27
ANKRD36B
DYNC2I1
EFHC1
CXCL2
NPDC1
ENTPD2
RIOK1
CAGE1
EIF2AK3
ZNF76
INTS7
DTL
CGRRF1
MRE11
ANKRD49
TOMM34
LAMC2
CAP2
TNFRSF11B
COLEC10
POLN
HAUS3
SAYSD1
DR1
HPS5
GTF2H1
SLC44A3
ARL14EP
RAD21
COQ2
CCDC34
VRK2
SRP9
CTNNB1
MCL1
KRTAP2-4
CCDC15
PIK3R1
HTR7
PGBD1
ACYP1
ZC2HC1C
HDGFL1
RNF150
LYPLAL1
IP6K2
CAST
SLC13A3
MRPS18A
TP53RK
PIGC
RAD51AP2
KRTAP4-3
CEP55
DPH6
SESN3
TMX1
DDX10
TAF7
PIP4P2
TIMM23
NUP133
ACTR8
ABCD3
SEL1L
FER
NOL8
CENPP
ATG14
PELI2
RALGAPB
PRELID3B
DSCC1
DEDD
MAP3K13
DDX60
UBE2N
WBP1L
TUT7
PTPRK
EHBP1
ZNF583
YTHDC2
MSANTD4
TBCA
ZNF326
FBXO34
SCO1
ADPRM
ZNF337
RFESD
FBXO4
ZNF557
ARHGAP24
RIC8B
UTS2B
CCDC50
FAM122A
LSM6
MTCH1
EIF5A2
MOCS2
STIMATE-MUSTN1
STIMATE
OXNAD1
DPH3
CD55
KIAA1586
ETAA1
CXCL3
DNAJC9
SYS1
DAAM2
CFAP299
ARG2
SECISBP2L
L3HYPDH
JKAMP
KRCC1
FAM135A
ZBTB40
ZNF438
ZSCAN16
TCAIM
BANK1
CNTRL
PAQR3
C5
CARMIL1
LRRC37A3
C1orf53
EDEM2
ZC3H12C
MPHOSPH6
ADRB2
TRIM68
WIPI1
ADGRB3
SLC25A3
RBM19
SPATA4
FAM76B
CEP57
PDXDC1
SCAND1
ZNF397
RBM12
CPNE1
UTP15
ANKRA2
C4orf3
GABRB3
PTGS2
RGS2
CLEC12A
NUF2
CFAP58
LSM4
ERO1A
NAALAD2
NIPSNAP3A
PRPF38B
NET1
MROH9
FOXP1
ECT2
CA2
SMC3
GNPTAB
TDG
APC
PRICKLE2
CCDC66
SLC25A32
DCAF13
HSD17B7
ERMARD
IMMP1L
ELP4
SNAPC1
ZSCAN31
APPL2
WDPCP
MDH1
RGL1
FDXACB1
C11orf1
MTHFD2L
GCH1
GRPEL2
EEF1E1
NT5E
POLE4
SUMF2
SPTLC2
AKIRIN1
ANKRD36C
SMG5
GSTA4
MANBAL
TMEM79
CETN3
C5orf51
FANCE
TOMM20L
TTC12
NDFIP1
ARIH1
SLC3A2
VEZT
FGD6
SELENOK
WDR77
ATP5PB
CLGN
IL6ST
RNF8
CPOX
CCDC6
DENR
NELFCD
SECISBP2
USP6NL
IFT57
DTNB
BBS10
LONRF2
ZNF333
ERO1B
BRAP
ACAD10
SYNE2
DGUOK
MAP9
ACTA2
XRCC4
TMEM167A
MAL2
TEX10
RALGAPA2
MED13L
SLC35B3
ISOC1
MND1
UROS
BCCIP
CDC5L
SAV1
OXR1
FAM204A
CEP120
TBC1D19
LIMA1
MCM3
SH3RF2
EREG
ACAT1
PTP4A1
H2BC15
H2AC15
ZNF25
CSRP2
GBP2
CREBZF
PXT1
KCTD20
MFAP3
FAM114A2
NEDD1
RAD54B
ARHGAP19
TNFRSF21
CSDE1
CLIP4
CEP295
METTL15
KIF18A
MSRB2
SLC17A5
ZNF215
FAM8A1
FDX1
MYLIP
ZFPM2
CXCL1
PDRG1
EFCAB13
TFIP11
KDM3A
RFX1
HMGCS1
MED17
LUZP1
CLTC
ANKRD46
CUL5
TMED7-TICAM2
TMED7
PIGF
CRIPT
RABGGTB
MAPKAP1
STAC
PRKD3
TTI1
RPRD1B
ZNF302
RASGRF2
EXT1
CHD6
SDE2
H2BC4
H2AC6
GNPNAT1
KIF3B
AARD
RAB33B
UGGT2
ZNF772
SAMD13
RTCA
SERINC3
DERA
PACRGL
BIRC2
CDC7
NME7
BLZF1
ACOX3
C5orf63
CPE
HELB
SEMA3C
RPP30
C6orf226
TTC29
ARL4A
CCDC39
RPF1
MAD2L1
RABEP1
EIF3C
REV1
HYDIN
MTPN
LUZP6
CCNH
EIF3CL
SMIM12
C12orf66
PTMA
TNC
RPL5
GMFB
LPCAT3
MAML2
POLR2K
FBXO43
ATOH7
TBC1D7-LOC100130357
TBC1D7
ATP6V1C1
CHIC2
SPATA17
GPATCH2
MTX2
AUH
CDK17
TNPO1
OTUD7B
CLASP2
TMEM242
STK38
ZBTB17
ZNFX1
PCNX4
EDEM3
MRPL33
ANXA4
AAK1
NME6
CFL2
CRYBG3
NBAS
MALT1
ISCA1
ACTRT3
CHRM3
HSP90AB1
KLHDC9
CTR9
ARL6
CLDND1
PIGM
TAF9
RAD17
AK6
ZNF543
RAB32
CR1L
ATP6V0A1
RBBP9
MOV10
TMEM17
VPS8
DNAJC25-GNG10
DNAJC25
SUCLG1
ARMC4
H4C1
H3C1
H1-1
PPIP5K2
MYEF2
CTXN2
RIPK2
HEATR5A
CDC42BPA
TANC2
C4orf19
UBE3B
KCTD10
UQCRFS1
PPFIA2
TAP1
PSMB9
GXYLT2
RAB23
RNF19A
SLC35D1
RNF217
TUT4
CHD1
CHST10
SLU7
PTTG1
MED20
BYSL
ANAPC10
ABCE1
ARFGEF2
PRR16
RBMXL1
KYAT3
UBA6
ENDOD1
CTNNBL1
PRICKLE4
NT5DC3
FRS3
TMEM38B
TRPC4AP
MRPL17
ILVBL
WDR27
C6orf120
VAMP4
TSGA10
GLTP
CCDC112
MRFAP1
ERGIC3
SUCO
PDP1
GOLIM4
ALS2
SF1
FAM13C
NCOA3
MTRF1L
CPD
PRPF39
ABCF1
EIF2AK2
COG6
ATRN
KNTC1
TMEM229B
VSNL1
LYSMD3
RPUSD4
FAM118B
NCOA5
VPS37C
CYRIB
TTC13
ARV1
KAT7
ATL1
SMPDL3A
SHOC2
BBIP1
NAXE
RFX3
BIRC3
SGPL1
MAP4K5
DERL1
MCOLN3
DYNLRB1
STK17B
NHLRC1
LPAR1
PLEKHH1
KDM3B
CACHD1
ETS1
DYNLL1
EXPH5
GRIA4
ZNF124
FRMD6
FANCF
PPP1CC
TMEM170B
MSMO1
RNF182
CDC73
RDH14
CUL7
TTC17
STAMBPL1
C12orf45
SLC25A51
MRS2
UNC13B
TNFAIP8
ATXN1
TMEM123
NSRP1
TXNDC12
BTF3L4
RPIA
LGALS3
CHMP4C
HARBI1
ATG13
F13A1
ANKRD31
GBE1
OGFRL1
PSTK
TGDS
SACM1L
RBM17
PRDM2
YAP1
STX12
DELE1
CENPE
C12orf29
FERMT2
SRSF11
FBXW2
TASOR2
HMGCLL1
ZNF596
UQCC2
NFYB
SEC24D
PAPSS1
SMAD5
EXOC2
NAA20
SLC8B1
CCDC130
SNX19
ATP6V1G1
MEF2C
TRDMT1
AGL
EXOC5
AP5M1
ACYP2
CTNNA3
MRPS30
SFXN1
CEP135
INTS12
GSTCD
PHF3
PRDM1
CRB1
NUCKS1
YTHDC1
XRN2
ENTPD7
ACSS3
GDAP1
HSPA5
LOC100996750
KRTAP4-7
TTC14
SNRPF
VAMP3
ASCC3
H3C3
H2BC3
GMDS
AKT3
MMUT
CENPQ
LYRM4
FARS2
CYB5R4
CCN3
SUCLG2
SPIN4
SHQ1
MAK
THUMPD2
PAWR
CFAP70
TRIM32
ASTN2
COL8A1
RASSF6
LRRK2
LOC441155
MICU2
ZNF266
HECTD1
TSHR
VWDE
PLCXD3
DEFB112
AGBL4
PPME1
C2CD3
RAD18
ARHGAP5
RNF13
CSNK1G3
ROCK2
BOD1
POFUT1
PLAGL2
FANCL
PPP1CB
ELMOD2
TRIQK
ZNF700
USP38
ZNF32
SART3
ISCU
ZNF445
TOR1AIP2
STAM2
KIF5B
NDUFAF2
ERCC8
SVBP
ERMAP
ZSCAN26
C14orf28
C7orf25
PPIC
LSM11
ARF4
CCDC88A
ZCCHC4
RORB
NUDCD1
PEX3
ADAT2
FAM149A
TET2
TRPS1
CTSC
ZFYVE9
TBC1D3L
TBC1D3K
TBC1D3J
TBC1D3I
TBC1D3H
TBC1D3G
TBC1D3F
TBC1D3E
TBC1D3D
TBC1D3C
TBC1D3
TM9SF3
H3C12
H2BC17
H2AC17
IKBIP
APAF1
OR2L13
OR2AJ1
AK2
BMT2
DNMBP
ZNF391
C2
PTPN2
PHF20
CGGBP1
FAM83B
BRINP3
EHMT2
DNAH14
EIF2B2
TDP1
GPCPD1
PIH1D2
NKAPD1
HAPLN1
SEC31A
RAB38
EIF2D
ZBTB12
DDX46
TAF11
ANKS1A
LAMTOR3
RNF180
LRRFIP2
DHRS4
EFCAB11
KTN1
UHMK1
ANKEF1
RAB11FIP2
ZNF654
WWP1
DEPTOR
TMEM19
USP2
KRBA2
RERE
HNRNPUL1
COPS3
CLK4
PPP1R11
RWDD1
SESN1
H2BC11
H2AC11
DDX1
MIPOL1
CMTM6
TFAM
CEP57L1
GABRB1
ZDHHC13
RIOX2
DUSP6
NKIRAS1
RPL15
LDAH
SULT1B1
CNIH1
ZNF706
NDUFV2
ILKAP
CRY2
ZPBP2
IKZF3
NEK7
ZKSCAN4
SPCS3
HIF1A
DTWD2
PCED1B
AMIGO2
ARHGEF37
TRIM39
WLS
SYNRG
FBXO48
APLF
HECTD2
FBXO9
CILK1
ZNF704
NUDCD2
HMMR
C18orf21
OPN3
CHML
MRPS5
MYL12B
PKN2
PRDM4
TRIM39-RPP21
RIOK3
USP45
MTCP1
CMC4
BRCC3
DENND1B
PAQR8
SCARB1
SSX2IP
TIFA
TMEM251
MOAP1
RNF20
BTBD3
NEMF
ZNF346
ZNF432
MAPRE2
SLC36A1
TMX4
DNA2
CCDC150
RNF38
ANKRD18B
IER5
ZNF521
ATP1B1
MTERF2
POLR3B
ROBO2
YWHAB
FNIP1
SRSF9
SREK1
ZSWIM7
TTC19
THBS4
MTX3
FANCD2
ZNF343
SEC22B
C20orf96
LRP12
MLLT10
ATR
HSP90B1