ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX277134 | T.T
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◣ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
NAV2
FAM227A
CBY1
NOTCH1
LFNG
SINHCAF
PYCR2
HMGB1
PLPP2
MED25
FUZ
NDST1
KDM2A
FRG2C
NDUFB5
MRPL47
TGIF1
MTF2
DNM1L
PTMA
NEUROD1
ZSCAN2
MYEOV
TMEM88B
ANKRD65
SNX16
SMCO1
DPP3
ARIH1
CLCF1
KMT2B
FGF19
ESRP1
DUX4
WDFY2
ARID2
FHL2
ITGB4
WDR74
MTDH
FRG2
MCCC1
ISL2
TINAGL1
PHF5A
ACO2
LYPD1
SPINT1
MUC1
TIAF1
MYL12A
LIMK2
FBXL19
VWCE
CNP
SMIM3
TRIM48
DISP3
ARSG
TMEM205
CCDC159
RAB3D
SIX2
JUP
ADAM28
F11R
CHD6
KLF7
OLFML3
ALDH7A1
DDX17
ZNF775
CAPNS2
IQCH
AAGAB
RFLNA
SH3GL3
TCF12
CCT2
GLI2
CEP41
ERGIC2
SRI
CPT1A
TIA1
KCNN2
CYTH2
VASH2
MUS81
CFL1
POLR3E
HIPK1
ETV1
OTUB2
HNRNPDL
ENOPH1
N4BP1
DST
CAPRIN1
SOX5
EP300
NUP160
NDUFS5
SLC16A13
ESRRA
CATSPERZ
CCDC200
OAZ2
PLEKHA3
FKBP7
LRRC25
CUEDC1
CPNE2
UNK
H3-3B
IFRD1
YWHAZ
MS4A2
SHF
MAP3K2
KLK6
GRK6
SPHK1
PELATON
PMEPA1
SOX6
COL23A1
C11orf58
HNRNPC
KIF26B
ZFC3H1
THAP2
POLB
CYP1A1
ZNF268
ZSCAN9
ZFAND3
TTF2
ZNF428
PER2
CDH13
RHOBTB2
AHNAK2
SLC33A1
PIMREG
TIAL1
H2BC4
H2AC6
TMEM41B
SUFU
ACTR1A
EFHC1
CDCP2
ITGB1
ZNF506
SUN1
ST8SIA1
ABCC10
LPIN1
SYNCRIP
VAMP5
BCAS2
EFNA1
RSF1
AAMDC
CDC42EP3
TNRC18
LOC100129484
SLC25A36
ATAT1
ETNK1
DMRTA2
HID1
NPIPB12
TJP2
GPR39
EXOSC2
PDIA4
RBM39
PDP1
ABCC1
SRSF7
ETV5
MUC3A
FXR1
TENT5C
NPIPB5
ZNF195
EXOC5
AP5M1
ASMTL
FBRS
SHISA7
TSPAN14
C6orf132
UBTD2
BMF
ARHGAP5
EPB41L4B
NASP
SLC2A4
HES1
ACOT1
TTC13
ARV1
MEF2C
KNTC1
TNFRSF21
NPIPA3
NPIPA2
ZNF608
ONECUT2
PIN4
SLC7A5
ZDHHC5
JMJD7-PLA2G4B
JMJD7
FGF1
IVNS1ABP
SOX2
PSME2
EMC9
ADRM1
OR7A10
EIF4A2
RTBDN
MAST1
EIF1AX
TMCC1
MNT
CNIH4
PRORP
PPP2R3C
CSRNP2
KIAA0040
TRIB1
PRDM2
NPIPB8
TMEM200C
DHRS3
RALGDS
C15orf40
AKNA
RBFOX2
ZNF627
LOC100509620
DOCK5
MYL12B
HMGN1
ZNF37A
NTN5
PGBD2
CAST
MXD1
WDR36
LYRM1
DCUN1D3
CHD1L
TBC1D31
UBR2
PRKAB2
FOXO6
LNX1
RBBP6
G3BP2
ID3
MAST4
ABCC2
ACSL6
GDF5
CEP250
CASQ2
SLCO5A1
ERV3-1-ZNF117
ERV3-1
CLDN4
RASAL2
LMNA
MARCKS
S100A16
RAPGEFL1
HSPH1
RRBP1
FAM83G
ETFRF1
CFAP94
CSDE1
PLA2G6
ZBTB6
SRSF6
GPSM3
FZR1
H4C14
PDE4DIP
GREB1
ZBTB37
IRAG2
NRCAM
DHX32
TES
ADAR
TAX1BP3
EMC6
MBNL1
SLC41A3
FAM83B
GSN
CEP63
ANAPC13
C2CD5
ETFBKMT
NEBL
PTX3
MOB3C
PDE4D
VDAC2
TOP1
DGLUCY
RABEP2
C16orf74
PIGX
CEP19
C1QTNF7
SPAG4
GPR158
HLTF
MCM7
AP4M1
LSG1
ARNTL2
C15orf62
PLEKHG1
GADD45A
NWD1
ANKRD40
KRT6A
CD55
RAPGEF5
ZSWIM4
POU2F1
WDR33
NCOA4
HNRNPU
MT1B
SNAPC3
MSANTD4
CCDC88A
PHACTR2
TMEM107
MAP3K9
EXD1
CHP1
TEX9
RFX7
TMUB2
HEXIM2
CHD9
MTRNR2L2
MSH3
DHFR
KDM3A
PIF1
TLX3
RIOX1
GGPS1
ARID4B
S100A5
S100A4
S100A3
PSME3IP1
RSPRY1
MTA3
KCNG3
PTPN12
DDX5
CEP95
TSPAN13
GSG1
OGA
SPATA12
GTF2H4
SPRY4
ZNF763
H2AJ
NR1D1
KCNK15
GET3
BAHCC1
NPIPB3
DDR1
ZMAT2
THAP10
LRRC49
MEX3D
CHD8
CREM
DCBLD2
RTN4
PWWP2A
ARF4
PSMB7
DCLRE1B
AP4B1
NPIPB13
KMT5B
MIDEAS
NFE2L2
ZNF669
YLPM1
EXPH5
PTPRH
KMT5A
SPAAR
VPS50
HEPACAM2
PNN
TRAPPC6B
CD248
CYP2S1
AMN1
BORCS6
DENND4A
HAO2
EEF1AKNMT
NIBAN2
RNF13
BRMS1L
SLC25A21
CORO2B
ARID5A
ANKRD12
CDCA4
STAG3
GPC2
CCND1
CA5B
HOPX
LOC100505841
RNF103-CHMP3
RMND5A
TNFAIP8
SLCO1A2
BCL2L11
SF3B5
FAM107B
CLEC2B
WDR54
C2orf81
M6PR
KLRG1
ARPP19
ZFHX3
NDUFS2
ADAMTS4
PARP2
CTXN3
LARS1
PLCXD2
SMARCA2
MAMDC2
REST
CDX2
NES
TMPRSS11E
DPPA5
SACS
ARHGEF38
PIPOX
OTX2
ZNF483
METTL11B
DNMBP
MTRNR2L8
CACHD1
AGO1
DUSP6
NRG1
TCF7L1
RMND5B
ANKRD1
CD99L2
LRRN1
MTRNR2L1
SFRP2
GOLGA6D
NTRK2
HDAC9
SOCS3
GIMAP5
FAM222B
SPATA45
PF4
GDF11
BCOR
PHC1
PPBP
SHCBP1L
MFSD4B
SNRPN
PRICKLE1
OBI1
MTHFD1L
SAMHD1
RPH3A
SRRM4
BTG2
LMCD1
OR5AR1
GAD2
FLAD1
ZSWIM3
ACOT8
CLDN9
POU5F1
EDDM3B
SLTM
APOBEC3F
FBXW11
TALDO1
DNMT3B
MED12
TDGF1
ABHD11
HESX1
MOBP
SHISA5
RASGRF2
VENTX
ZNF398
MRPL20
NADK
ETS1
NFE2L3
RIIAD1
SCGB3A2
DDX43
FGD3
UTF1
WFDC8
PSMD9
HPD
NANOG
VCAN
ZNF343
RCN1
ETV4
GOLGA6B
NCDN
KIAA0319L
FGD4
LEFTY2
GOLGA6A
CELF3
TRAPPC8
LZTS1
CER1
CELF4
IER5L
DAGLB
USP44
GADD45G
MYSM1
TRIM24
FGFR2
FAM120B
HES3
ICMT
FZD8
FIGNL2
FBP1
GPRC5B
LIN28B
FGF2
GNAI2
PARP1
PPP1R16B
SNURF
GOLGA6C
SLA2
RIF1
IL34
KIFBP
FRAT2
MRS2
SGMS2
LEFTY1
SAMD5
FBXO40
TRIM2
TRIP4
PALM2AKAP2
DHDDS
DND1
SLC35A5
MACROH2A1
ATG3
FOXP1
RASA1
PRDM14
FZD2
HOXD13
HOXD12
CCDC169-SOHLH2
CCDC169
HGS
ARL16
WNT5B
LIPK
LRRTM3
ZNF532
PLAGL1
CRYGB
SPIC
SLC2A14
ECE1
MDN1
LINGO1
JPT1
TRIML2
PDPN
ITPRIP
GJA1
APOBEC3D
APOBEC3C
GXYLT2
MAD2L2
SCAF4
LIMCH1
PREX2
SYT2
ST18
POSTN
BEND3
UNC13B
PDCL
RFX4
TMC5
CDC14B
PRR15
SOX14
ECT2
CHFR
PCBP1
TGIF2-RAB5IF
TGIF2
TUBB
MDC1
ALDH1A2
AASS
DCAF4L1
WBP1L
BFSP1
PCLAF
ZNF436
FAM180A
ITGB5
VOPP1
DRAXIN
MTM1
SALL3
ZNF335
EEF1A1
GDF3
LRRTM4
FAM200B
DLL1
L1TD1
HMOX1
GABRQ
ZSCAN10
TIMP4
DPH6
FOXD1
SRCIN1
HBG2
IFT80
ADA2
SH3BP4
TBC1D16
CARHSP1
ITGB3
NDUFV1
KDM2B
PEAK1
HMG20A
SORBS2
CCDC130
MOG
SLC39A8
STK31
ZNF781
ISOC2
TIAM2
SENP2
CACNA2D1
WDHD1
SOCS4
SYN3
EXT1
ZNF304
PUF60
SASH1
DENR
MMACHC
DUSP12
AHCYL2
USP7
NDUFAB1
C8orf58
TNC
AK4
WDR49
DDX3X
GCNT2
GTF2I
PNRC1
LYPD6B
UGT1A6
SLC46A1
CHN2
KCNJ1
RGS3
C10orf95
SNX19
AEBP2
AKIRIN2
PTAR1
ACVR1
ZNF536
TNFSF8
GABRB3
KRT8
ANK2
ABCB5
SEC22B
CAPN3
ZCCHC3
TOMM40
TMEM47
VANGL2
TTYH1
SLC20A2
PACSIN2
DOK7
ABL2
LRIG1
ESR2
CAMTA1
EMSY
C20orf96
PGPEP1
ZNF296
GEMIN7
C1orf127
FAM24B
TSKS
AP2A1
PSIP1
LIN28A
FZD5
UFD1
TRIB2
CDC45
NECTIN1
PXMP4
HHIP
KLF3
UBAP2
CCN2
PDE1B
FXYD5
REV3L
AASDH
ZNF565
PITPNM2
DIDO1
AUH
SMAD3
ZBTB45
CCL26
GLDC
NPSR1
TPST2
DET1
TMEM43
MVB12A
CHCHD4
TIAM1
TESK2
PRKAG2
FAM20A
INSM1
ZNF600
TRPC4AP
SLAMF1
MYCL
SLC3A2
TCF7L2
SLC23A2
TFE3
ZNF649
SLFN12
DPPA4
RPL8
BCL9
ATP6V1G1
ZNF664-RFLNA
ZNF664
CCDC92
SUCO
PPP2R3A
PRRC2B
RMND1
ARMT1
PXDC1
PRODH
LOC102724788
ZNF875
VPS37B
SMIM14
TLE1
CDH10
CHMP7
MAGEB2
NEUROG3
PGBD5
TRPM1
CNOT11
LRAT
SOAT1
CTNNA1
LRRTM2
PYGB
FAM153B
PDGFA
RNASE9
TNRC6A
ESX1
LRRC47
SAPCD2
KLF5
BFAR
KLF6
H3C15
H3C14
H2AC19
H2AC18
CNGA1
STMN1
STOX2
B3GALT5
CFLAR
ZBTB18
TFAP2A
PGK1
MAP6
OSBPL1A
BIN2
BCAT1
MMP10
EPB41L1
CRISPLD1
ACSL1
MTHFD1
KCNIP4
SELPLG
YIPF4
ZFP3
CSF2RB
BRINP2
PAK1
INO80D
PLPP3
TET3
ZNF552
ZNF517
DACT3
CDYL
NXPH2
PNCK
GSAP
ARHGAP42
APOBEC3G
NIPAL1
GAST
CCDC85A
PIK3R3
ACOXL
CFAP20
G3BP1
ETV6
LRGUK
YAF2
KRTAP3-1
SACM1L
DICER1
ZNF202
CELSR3
TNFRSF6B
DTNA
F11
SORT1
DEFB114
DEFB113
TRMT2A
RANBP1
BBC3
IFI16
EXOSC9
ZNF814
TKT
PTPRN
TP53
ASIP
GPC4
OR2T1
CXADR
TACC2
TOX3
SAXO1
MRPL18
CAAP1
NUAK1
MBOAT2
SDCBP
SDHC
UBQLN4
LAMTOR2
DDX39A
CD200
SALL4
NEPRO
EPHB3
ARSL
DNAJC7
CTNND2
ANAPC15
CD2BP2
HOXB1
ERMN
GALNT8
SLC6A8
SNAP23
TRIM13
ID1
C22orf39
MEIS2
SPTLC2
PREP
UPF1
DHX8
HES5
PANK4
PPP1R18
NRM
AJAP1
AIRE
LEKR1
TSPAN5
NKIRAS2
LLGL1
DCLK1
EPHA4
SHC3
STRA6
STAC3
SMARCAD1
RABGAP1L
SLC25A11
RNF167
ABLIM1
LONRF3
WASF1
CDC40
TPCN2
OR6C3
VEZT
FGD6
PLCH1
ERBB2
AFF1
TLE3
RAB30
DPYSL3
CCL2
CAPZB
TBC1D23
ADGRL2
MSL2
IL7R
GABBR1
CNMD
NACAD
ZFYVE1
TUT1
CNR2
SDCCAG8
CEP170
CHD7