ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX330107 | ReN-VM
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◣ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

PMF1-BGLAP
PMF1
COL23A1
MAMDC2
WDR74
FAH
CYP4F11
MUC3A
NGB
FRG2
OPRL1
LKAAEAR1
SNX16
SCML1
LOC105370980
MTF2
EPN1
SACS
ATXN2L
FAM240C
OSBPL2
ESPNL
TMEM216
C1orf198
FRG2C
OR2T1
GADD45G
TTYH1
SKIDA1
LFNG
GPSM3
CAMTA1
ANKRD18A
LRP2
UCKL1
HMGB1
TRIM48
CSRNP2
MUC1
CRLF2
STK32C
LRRC27
NRARP
APBB2
CORO2B
ONECUT2
SPIN1
PLEKHB1
HDAC9
CAPRIN1
HMGN1
HES5
PANK4
HNRNPDL
ENOPH1
CCNG2
BZW2
ANKMY2
FABP7
PPP1R15B
ARID2
ACSL6
KRTAP4-12
FAM120B
DLL1
SLC6A9
LGR6
ARIH1
NES
PDE4B
KLF7
CITED2
ITPK1
LOC100996750
KRTAP4-7
CRYAA2
CRYAA
ZNF717
RGR
LRIT1
CHRNA9
ZNF775
NEU4
ACSL1
MEX3D
KRTAP4-8
KRTAP4-11
BMF
UNC45B
KRTAP9-7
DNMBP
RTN4
OAZ2
LRTM1
RUBCNL
FAM181A
SLC7A5
TUBA1C
ZNF277
DOCK4
SPDYE14
SPDYE10P
ALDH7A1
CDC34
IQCH
AAGAB
TSPAN13
MTDH
KDELR1
GRIN2D
DDX17
ITPRIP
ANKRD6
BCL9L
PCBP4
AGO1
GADD45A
ANKRD18B
NDRG2
TPPP2
VANGL2
KRTAP4-4
CTAGE15
ATAT1
APC2
KRTAP2-4
PYCR2
HBP1
SIPA1L1
PTPRK
IFIT1B
ARHGAP11A-SCG5
ARHGAP11A
PLXNA2
OR8U8
OR8U1
ENO1
KLHDC8A
MUC2
UBTD2
STX6
CTAGE8
CTAGE4
POTEH
PHF24
CXXC5
FGFRL1
STAU2
KMT2B
MARCKS
PAQR6
DUX4
FOXJ1
MAN2B2
LPP
CDK5R1
FMNL3
CCDC200
LINGO1
SHF
CLEC19A
TRAF3IP2
KRTAP4-5
PCDHB5
ADGRB2
NDUFB5
MRPL47
KDM2A
LRIG1
HES6
NREP
RHOJ
ADRM1
TMPRSS5
KRTAP1-1
ARHGEF2
RALGDS
LRRN1
RGS3
SPHKAP
KIF21A
KCNQ3
ESRRA
CATSPERZ
FANK1
TP53INP1
ATN1
PITPNM3
RIPOR3
TRAPPC3
MAP7D1
GALR1
PTGS1
CRB2
TRIB1
INMT
GP6
LMCD1
VOPP1
C1orf127
TRDMT1
CCDC88A
FZD9
ZNF358
ADNP
NFIB
LMO3
NCOA4
TEAD2
DKKL1
TRMT1
NACC1
PHYHIPL
C16orf46
ENTPD2
KRTAP2-3
EHF
KRTAP2-2
KRTAP4-6
UGT1A7
RAB6B
KRTAP2-1
VPS4A
GFAP
AQP5
PTMA
GABRR2
KLF12
PLEKHG2
CCSER1
MED25
FUZ
SLC29A1
MYMX
ZBTB25
ZBTB1
CNDP2
PIPOX
DDR1
CDK5RAP2
OR2A7
TNRC18
LOC100129484
COX20
TBC1D3L
TBC1D3K
TBC1D3J
TBC1D3I
TBC1D3H
TBC1D3G
TBC1D3F
TBC1D3E
TBC1D3D
TBC1D3C
TBC1D3
FAM227A
CBY1
NUDT19
KRTAP4-9
CTAGE6
HES3
PLCG1
FGFR2
LIMCH1
TES
NTN5
PREP
HSPH1
ITGB8
KANK1
SRSF6
CASTOR2
LZTS1
STAG3
GPC2
OSGIN1
FGD3
TTYH2
AMMECR1L
PFKFB3
RNF44
BCAR1
CLEC18B
GPAT4
MLPH
TCTEX1D4
PLK3
TMCC2
KRTAP21-2
TRMT2A
RANBP1
TAS2R41
CTDP1
PTTG1IP
TMEM132A
CLEC18A
PLCB4
FAM76A
CTAGE9
ZNF677
VN1R2
MIDN
PAX6
CNN3
ZNF763
RRBP1
UQCRC1
FRAT1
IL2RB
OR4F17
KRTAP9-6
SNAPC3
TCF7L2
ABAT
DDX5
CEP95
MEGF9
UBE2E3
CD24
IRAG1
SLC44A5
OTOP1
AGRN
OR56A1
VSTM2L
ATXN7L2
DNAH1
SPAAR
TEPP
SLC43A2
UNC13D
KRTAP9-8
SHTN1
FBXL19
SLC3A2
DYRK1B
NIN
POLR3E
CRIP2
ZSCAN2
FAM102A
PLXNB1
SLC39A13
SOX6
FOXD1
SRSF7
ACVR1
ZSCAN9
IFI16
POLB
KAT6A
PYDC5
ST7
TNFRSF11B
COLEC10
KRTAP1-3
ADO
CREBZF
IFI27
CDK2AP1
KRTAP1-4
PCDHA5
ARNT2
PCDHA6
CHD6
USP22
MYOG
LOC647264
BCL2L10
TMEFF1
NELFCD
OR4F4
PIMREG
FSCN1
ACSS1
TUBB2B
PCDHB11
POTEM
NOTCH1
SLIT1
SENP8
MYO9A
TMPRSS7
PTPRD
NSUN6
ARL5B
OTUD7B
SFXN5
TUBB
MDC1
TNFRSF6B
RSF1
AAMDC
TEX2
SRGAP2B
SRGAP2C
EEF2K
TCF7L1
NFE2L1
HRAS
ZCCHC24
POLDIP3
SYNCRIP
CELSR3
KMT5B
FILIP1L
ID2
LMO4
CDH18
PDE4DIP
SCD
TMPRSS9
RBM38
LRRC24
C8orf82
DST
SMARCA2
REST
CDX2
SOX2
NAV2
TMPRSS11E
DPPA5
ARHGEF38
OTX2
ZNF483
METTL11B
ID3
MTRNR2L8
CACHD1
DUSP6
NRG1
RMND5B
ANKRD1
CD99L2
MTRNR2L1
SFRP2
GOLGA6D
NTRK2
SOCS3
GIMAP5
FAM222B
FGF1
SPATA45
IFRD1
PF4
GDF11
BCOR
PHC1
PPBP
SHCBP1L
MFSD4B
SNRPN
PRICKLE1
OBI1
MTHFD1L
SAMHD1
RPH3A
SRRM4
BTG2
OR5AR1
GAD2
FLAD1
ZSWIM3
ACOT8
CLDN9
POU5F1
EDDM3B
SLTM
APOBEC3F
SMCO1
FBXW11
GRK6
TALDO1
PLPP2
DNMT3B
MED12
ZFHX3
GSN
ZNF608
TDGF1
ABHD11
HESX1
MOBP
SHISA5
ETV1
RASGRF2
VENTX
ZNF398
MRPL20
NADK
ETS1
NFE2L3
RIIAD1
SCGB3A2
PMEPA1
DDX43
UTF1
WFDC8
PSMD9
HPD
NANOG
VCAN
ZNF343
RCN1
ETV4
GOLGA6B
NCDN
KIAA0319L
FGD4
LEFTY2
GOLGA6A
CELF3
TRAPPC8
FZR1
CER1
CELF4
IER5L
CYP1A1
DAGLB
USP44
MYSM1
TRIM24
ADAM28
ICMT
PHF5A
ACO2
FZD8
FIGNL2
FBP1
GPRC5B
NRCAM
LIN28B
FGF2
MTRNR2L2
MSH3
DHFR
GNAI2
PARP1
PPP1R16B
SNURF
GOLGA6C
CYP2S1
SLA2
RIF1
SOX5
ESRP1
IL34
MCCC1
CYTH2
KIFBP
CDC42EP3
FRAT2
MRS2
SGMS2
LEFTY1
SAMD5
FBXO40
PER2
TRIM2
TRIP4
PALM2AKAP2
TMCC1
DHDDS
DND1
SLC35A5
MACROH2A1
TMEM41B
ATG3
FOXP1
AMN1
RASA1
PRDM14
FZD2
HOXD13
HOXD12
CCDC169-SOHLH2
CCDC169
HGS
ARL16
WNT5B
LIPK
LRRTM3
ZNF532
PLAGL1
CRYGB
SPIC
SLC2A14
ECE1
MDN1
ZFC3H1
THAP2
JPT1
TRIML2
PDPN
GJA1
APOBEC3D
APOBEC3C
GXYLT2
CCT2
MAD2L2
SCAF4
SPRY4
PREX2
SYT2
ST18
POSTN
BEND3
UNC13B
PDCL
RFX4
TMC5
CDC14B
PRR15
DHX32
SOX14
CEP41
DGLUCY
ECT2
CHFR
PCBP1
TGIF2-RAB5IF
TGIF2
ALDH1A2
NDUFS5
AASS
DCAF4L1
WBP1L
BFSP1
PCLAF
ZNF436
FAM180A
ITGB5
DRAXIN
MTM1
SALL3
ZNF335
EEF1A1
GDF3
LRRTM4
KCNN2
FAM200B
PIN4
L1TD1
VWCE
HMOX1
GABRQ
ZSCAN10
TIMP4
WDFY2
DPH6
SRCIN1
OLFML3
HBG2
IFT80
GET3
ADA2
SH3BP4
TBC1D16
CARHSP1
ITGB3
NDUFV1
KDM2B
PEAK1
HMG20A
SORBS2
NEBL
CCDC130
MOG
TJP2
SLC39A8
MAST4
STK31
ZNF781
ISOC2
TIAM2
SENP2
CACNA2D1
WDHD1
SOCS4
SYN3
EXT1
ZNF304
PUF60
SASH1
DENR
TGIF1
MMACHC
DUSP12
AHCYL2
USP7
NDUFAB1
C8orf58
TNC
AK4
WDR49
DDX3X
GCNT2
GTF2I
PNRC1
LYPD6B
UGT1A6
SLC46A1
CHN2
KCNJ1
RBFOX2
C10orf95
SINHCAF
NDST1
SNX19
PLEKHG1
UNK
AEBP2
AKIRIN2
H3-3B
PTAR1
ZNF536
TNFSF8
GABRB3
KRT8
ANK2
ABCB5
SEC22B
CAPN3
ADAR
ZCCHC3
TOMM40
TMEM47
SLC20A2
PACSIN2
DOK7
ABL2
ESR2
EMSY
C20orf96
PGPEP1
ZNF296
GEMIN7
FAM24B
PSME3IP1
TSKS
AP2A1
PSIP1
LIN28A
FZD5
UFD1
TRIB2
CDC45
NECTIN1
RASAL2
PXMP4
KDM3A
HHIP
KLF3
UBAP2
CCN2
PDE1B
FXYD5
HES1
REV3L
AASDH
ZNF565
PITPNM2
DIDO1
AUH
SMAD3
RTBDN
MAST1
SIX2
ZBTB45
CCL26
GLDC
SLC33A1
NPSR1
LMNA
TPST2
DET1
TMEM43
MVB12A
CHCHD4
TIAM1
TESK2
PRKAG2
PDIA4
FAM20A
INSM1
ZNF600
TRPC4AP
SLAMF1
MYCL
SLC23A2
TFE3
TSPAN14
ZNF649
SLFN12
TMUB2
DPPA4
ZNF195
RPL8
BCL9
ATP6V1G1
ZNF664-RFLNA
ZNF664
CCDC92
SUCO
PPP2R3A
PRRC2B
RMND1
ARMT1
PXDC1
PRODH
LOC102724788
ZNF875
VPS37B
F11R
SMIM14
TLE1
CDH10
SLC25A36
FOXO6
CHMP7
MAGEB2
NEUROG3
PGBD5
TRPM1
CNOT11
WDR36
LRAT
SOAT1
CTNNA1
SPHK1
LRRTM2
PYGB
FAM153B
PDGFA
RNASE9
TNRC6A
ESX1
LRRC47
LIMK2
ABCC10
DISP3
VASH2
MSANTD4
SAPCD2
KLF5
BFAR
KLF6
H3C15
H3C14
H2AC19
H2AC18
CNGA1
STMN1
STOX2
B3GALT5
NUP160
CFLAR
ZBTB18
TFAP2A
SLC16A13
MUS81
CFL1
PGK1
MAP6
OSBPL1A
BIN2
BCAT1
MMP10
ZNF428
EPB41L1
CRISPLD1
MTHFD1
KCNIP4
ZMAT2
SELPLG
YIPF4
ZFP3
CSF2RB
BRINP2
PAK1
INO80D
PLPP3
TET3
ZNF552
ZNF517
DACT3
CDYL
NXPH2
PNCK
GSAP
ARHGAP42
APOBEC3G
NIPAL1
GAST
CCDC85A
S100A16
PIK3R3
ACOXL
CFAP20
G3BP1
ETV6
CPT1A
LRGUK
YAF2
KRTAP3-1
SACM1L
DICER1
ZNF202
DTNA
ABCC2
F11
SORT1
DEFB114
DEFB113
BORCS6
BBC3
DPP3
EXOSC9
ZNF814
TKT
GLI2
PTPRN
TP53
ASIP
GPC4
CXADR
RFLNA
TACC2
SLCO5A1
OGA
TOX3
SAXO1
MRPL18
CAAP1
DHRS3
NUAK1
MBOAT2
SDCBP
SDHC
UBQLN4
LAMTOR2
DDX39A
CD200
SALL4
NEPRO
EPHB3
BAHCC1
ARSL
DNAJC7
CTNND2
ANAPC15
PSME2
CD2BP2
HOXB1
KNTC1
ERMN
GALNT8
SLC6A8
SNAP23
TRIM13
ID1
C22orf39
MEIS2
SPTLC2
UPF1
PIF1
MYEOV
DHX8
PPP1R18
NRM
AJAP1
AIRE
LEKR1
EMC9
TIAL1
TSPAN5
NKIRAS2
SH3GL3
LLGL1
DCLK1
EPHA4
SHC3
STRA6
STAC3
SMARCAD1
RABGAP1L
SLC25A11
RNF167
ABLIM1
LONRF3
WASF1
CDC40
TPCN2
OR6C3
VEZT
FGD6
PLCH1
YLPM1
ERBB2