ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5286341 | hESC WIBR2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◣ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

MAMDC2
SLA2
SMARCA2
ZNF483
APOBEC3F
TMPRSS11E
DND1
MED12
NRARP
FLAD1
REST
DPPA5
NRG1
VCAN
GDF11
VENTX
MFSD4B
ZSWIM3
ACOT8
STAC3
OTX2
TMC5
PHC1
FAM222B
MAP2K3
ASIP
RHOB
ESR2
EDDM3B
ALDH1A2
SOX6
RCN1
TDGF1
TRIP4
PCLAF
SOX2
MOBP
DUX4
MRPL20
SAMHD1
MTHFD1L
BCOR
CDX2
SPIC
PEAK1
HMG20A
TRPC4AP
WFDC8
ISOC2
ARHGEF38
GAD2
ZNF608
CAAP1
ID3
SHCBP1L
SACS
GIMAP5
DAGLB
FRG2C
TCF7L1
PSMD9
HPD
DDX43
SLTM
SNRPN
MACROH2A1
WDR25
WARS1
ARSL
PRICKLE1
LEFTY2
PRMT2
FAM227A
CBY1
BEND3
POU5F1
CELF4
SLC35A5
ATG3
KIF11
HESX1
NANOG
IL34
DUSP6
TPCN2
FAM200B
FGF1
FZR1
NPSR1
CAPN3
ECE1
KIF15
KIAA1143
SFRP2
ZNF398
CNGA1
NIPAL1
RMND5B
OPALIN
FZD8
MTRNR2L1
ETS1
TRAPPC8
PITPNM2
GATA3
ITGB3
ZNF781
ACOXL
TRIML2
LIPK
RASGRF2
HELLS
ZMAT2
ZNF343
LEFTY1
CRYGB
NTRK2
FRG2
APOBEC3G
ZSCAN2
CLCN4
APOBEC3D
APOBEC3C
TSKS
AP2A1
GSN
SLC2A14
GABRQ
ALDH2
PRDM14
ITGB5
FGD3
DUSP29
UHRF1BP1L
ANKRD1
UTF1
LRRTM4
SLC35F6
ZFYVE1
RAB40AL
UGT1A6
MBOAT2
CSDE1
OR5AR1
PROM1
BTG2
IFRD1
PAK1
DCAF4L1
NR6A1
SLC38A9
C10orf95
PLPP3
ARHGAP42
TUBB
MDC1
SMAGP
PEA15
MYSM1
PIPOX
NACAD
CACHD1
MTRNR2L8
NBDY
RASA1
MRPS25
TET3
SCHIP1
ZNF600
STOM
NCOA5
GLDC
DNMBP
CYP2S1
SGMS2
ZNF532
PCDHGB2
PCDHGA5
H3C15
H3C14
H2AC19
H2AC18
EXT1
LHFPL5
CLPS
SLC23A2
SNURF
UBAP2
CSGALNACT1
SRSF12
ANKRD40
WDR74
SYT2
GTF2I
CCDC169-SOHLH2
CCDC169
YIPF4
SLC7A5
CCDC200
CD99L2
MUC3A
SRRM4
PQBP1
TIMM17B
SPATA45
NDUFV1
RPL21
GALNT8
MTF2
TRIT1
OR2G2
SOCS3
DDX39A
CHGB
GOLGA6D
CFLAR
RNF17
PSME3IP1
DNMT3B
TRIM24
MDN1
OSBPL2
ARRDC2
GRIP1
LYPD6B
BRINP2
KDM5B
FOXP1
BCAT1
OLAH
LRRN1
NFE2L3
HES3
ICMT
PER2
DIDO1
FAM136A
TNIP1
OR7D2
PMEPA1
PRPS1
HDAC9
BDH2
SCGB3A2
MED4
RIF1
NDUFAB1
NES
PUF60
HOXB2
STMN2
DNAJB2
HAUS6
SCGB1C2
SCGB1C1
YAF2
PTMA
AJAP1
MX2
NDUFAF3
DALRD3
OBI1
SPRY2
LANCL3
PDE1B
SDHC
ERVH48-1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
UNC13B
TGIF2-RAB5IF
TGIF2
EID3
LZTS1
FZD2
CHFR
NDUFS5
SNX19
MVB12A
KLF5
FGF4
PDCD7
KIFBP
FZD10
LAPTM4B
CCDC130
SYTL3
PIFO
AGO1
CER1
CNBP
AHCYL2
HHIP
NAV2
GOLGA6C
NEBL
PLXDC2
BFAR
MICA
NDUFB5
MRPL47
FGD4
VCPKMT
TMEM68
TGS1
TNFAIP6
PCBP1
PTPRN
GUCA1A
PLEKHG5
RPS10-NUDT3
RPS10
JPT1
SYN3
ZFP3
TCHP
SPATA4
NAB1
WDHD1
SOCS4
SMCO1
GOLGA6B
ZNF649
RPUSD3
DENR
MCTP2
ST18
RTBDN
MAST1
CD200
PTPN12
SLC25A16
TMEM167B
RAD54L2
PIP5K1C
PPP3CC
CECR2
COX20
CTAGE9
ARID2
DHDDS
AIRE
UPP1
SOX4
AASS
PDCL
AK4
ALDH7A1
GABRB3
IFIT3
SEC14L5
CDC42EP4
SFRP1
ABCF3
PFKP
TFCP2L1
GOLGA6A
ARSG
THOC2
DNTT
GABRR2
CTSF
HEY2
FBXW11
PTCH1
C16orf78
ZNF565
VSIG10
GJA10
ZNF875
FOXB1
E2F7
HMGB1
FBP1
SEC22B
TRIB2
PXDC1
SDCBP
CNR2
NATD1
RHBDD2
ZMIZ2
HK2
RAB4B
MIA
PRR14L
GXYLT1
CD22
SCAF4
PRRC2B
MSL2
NCBP2AS2
NCBP2
PRCP
CLEC9A
NPS
TMEM41B
SALL3
SELENOT
ZC3H12B
PALM2AKAP2
RESF1
KRT34
FAM120B
DLL1
LMCD1
FGFR2
AKIRIN2
KLF7
PRODH
LOC102724788
C19orf25
IRF6
FDFT1
SAMD5
SLC35G4
ADAR
AP2B1
DERA
DNAJC25-GNG10
DNAJC25
EIF4G3
DET1
EXOSC9
TBCA
GAGE2B
TALDO1
MRS2
SALL4
THEM4
TMCC3
PPP1R16B
SULT6B1
CDK17
TRIM64B
PRKAG2
BIN2
CLDN9
ADA2
TNRC18
LOC100129484
RPL8
ZNF517
DACT3
RAB30
PRDX3
DCLRE1C
ISL1
CANT1
MMP19
STS
ABL2
RNF138
OSBPL8
LIMS4
PCLO
KLHL12
ZFX
MANSC1
MAP1LC3B2
SLCO4C1
CA8
LRIG2
FLRT2
HBG2
FAM153B
PRKAA1
SPEN
ZNF341
ST8SIA4
NUCKS1
KMT2B
PARP1
ONECUT2
TKT
ADRM1
RNASE10
SLC2A11
MPI
SH2D4B
IHH
SPTBN1
PMS2
AIMP2
CLEC2L
ZIC2
SLC20A2
PPP2R2A
CBFA2T2
METTL11B
PTAR1
DDX3X
ELP1
ABITRAM
SASH1
RMND1
ARMT1
NCOA7
CFHR4
ZBTB18
PRUNE2
NBPF9
BOLA1
AMPD1
DUSP12
TNRC6A
MRPL18
POGZ
BAZ2B
CSF2RB
LCA5
SMARCAD1
H3C8
H2BC10
RPH3A
GXYLT2
FAM180A
MARCKS
S100A16
TP53
SNAP23
LGR6
C1R
LPCAT4
HOXA1
ZNF518B
KRTAP5-9
SLC6A12
MALSU1
HOXA2
ZNF805
UPK1A
ATG4B
SOX5
SESTD1
EPB41L2
DEFB124
PDCD2
CMTM4
ARHGEF10
SLC9A4
NRG3
STMN1
MS4A12
NRG2
SLAMF1
NEPRO
TMEM52B
TRIM48
PIN4
ZSCAN10
MOG
MMACHC
SAPCD2
WDR44
MRPS23
NUP205
UAP1L1
CHI3L2
CATIP
SOX15
TMX4
ZNF878
PTPRF
SAMD4B
LRP6
HECW2
IGSF1
FAM20A
WDR36
ADGRL2
UBE2T
ITPRIP
KCNIP4
OR14A16
RASSF8
TOX3
SARNP
ORMDL2
OLFML3
CKAP5
TAS2R46
MED25
FUZ
IQCH
AAGAB
CDC14B
KRT8
TMEM43
CHCHD4
BCL2L11
TBC1D1
SLC35E4
ARHGAP36
PRR13
PLD5
TMEM241
MTUS1
SRSF7
SLC16A10
RNF20
TAX1BP1
PALMD
WNT5B
TFE3
CHD7
MT1E
IFITM3
IFITM1
GINS3
ADCK1
NGRN
RAB3GAP1
STRADA
ZNF607
PLD2
ZNF587
NUDT9
KRTAP17-1
CACNA2D1
TRIM22
TRIM5
CLYBL
PRDM7
ARID1B
SLC44A1
TOX
CT45A10
CT45A7
ZNF443
ZNF335
MYOM1
ZNF790
HGS
ARL16
LIMCH1
SRCIN1
LRRC47
PRR5L
NAXD
RTP3
SLC25A18
TMEM219
FUNDC1
HSD11B1
EPB41L5
TRPM3
FANK1
LEKR1
FRAT2
TMEM202
MIDN
H3C13
H2BC18
CHD1L
SYK
SUCO
KRBA2
STK4
MUC1
LFNG
PF4
PPBP
GRK6
PLPP2
NOTCH1
ZFHX3
DDX17
ABHD11
SHISA5
ETV1
NADK
ZNF775
RIIAD1
ETV4
COL23A1
SNX16
NCDN
KIAA0319L
CELF3
IER5L
CYP1A1
USP44
GADD45G
ADAM28
PHF5A
ACO2
FIGNL2
GPRC5B
NRCAM
LIN28B
FGF2
MTRNR2L2
MSH3
DHFR
GNAI2
ESRP1
GPSM3
MCCC1
CYTH2
CDC42EP3
FBXL19
FBXO40
TRIM2
TMCC1
AMN1
HOXD13
HOXD12
LRRTM3
PLAGL1
SNAPC3
ZFC3H1
THAP2
LINGO1
PDPN
GJA1
CCT2
MAD2L2
SPRY4
PREX2
POSTN
RFX4
PRR15
DHX32
SOX14
CEP41
DGLUCY
ECT2
WBP1L
BFSP1
ZNF436
DDR1
VOPP1
DRAXIN
MTM1
EEF1A1
GDF3
CAPRIN1
KCNN2
L1TD1
VWCE
TES
HMOX1
TIMP4
WDFY2
DPH6
FOXD1
IFT80
RTN4
GET3
SH3BP4
TBC1D16
ARIH1
CARHSP1
KDM2B
SORBS2
KDM2A
TJP2
SLC39A8
MAST4
STK31
TIAM2
SENP2
ZNF304
TGIF1
USP7
C8orf58
TNC
WDR49
PYCR2
GCNT2
PNRC1
DST
SLC46A1
CHN2
KCNJ1
RGS3
RBFOX2
SINHCAF
NDST1
PLEKHG1
UNK
AEBP2
H3-3B
ACVR1
ZNF536
TNFSF8
OAZ2
ANK2
ABCB5
ZCCHC3
TOMM40
TMEM47
VANGL2
TTYH1
PACSIN2
DOK7
LRIG1
CAMTA1
EMSY
C20orf96
PGPEP1
ZNF296
GEMIN7
C1orf127
FAM24B
SHF
PSIP1
LIN28A
FZD5
UFD1
CDC45
NECTIN1
RASAL2
PXMP4
KDM3A
KLF3
CHD6
CCN2
FXYD5
HES1
REV3L
AASDH
AUH
SMAD3
SIX2
ZBTB45
CCL26
SLC33A1
LMNA
TPST2
TIAM1
TESK2
PDIA4
INSM1
MYCL
SLC3A2
TCF7L2
TSPAN14
SLFN12
TMUB2
DPPA4
ZNF195
BCL9
ATP6V1G1
ZNF664-RFLNA
ZNF664
CCDC92
PPP2R3A
NTN5
VPS37B
F11R
SMIM14
TLE1
CDH10
SLC25A36
FOXO6
CHMP7
MAGEB2
NEUROG3
PGBD5
TRPM1
CNOT11
LRAT
SOAT1
CTNNA1
SPHK1
LRRTM2
PYGB
PDGFA
RNASE9
ESX1
LIMK2
ABCC10
DISP3
VASH2
MSANTD4
KLF6
STOX2
B3GALT5
NUP160
ZSCAN9
TFAP2A
SLC16A13
MUS81
CFL1
PGK1
MAP6
OSBPL1A
MMP10
ZNF428
EPB41L1
CRISPLD1
ACSL1
MTHFD1
SELPLG
INO80D
ZNF552
CDYL
NXPH2
PNCK
GSAP
GAST
CCDC85A
PIK3R3
CFAP20
G3BP1
ETV6
CPT1A
LRGUK
KRTAP3-1
SACM1L
DICER1
ZNF202
CELSR3
TNFRSF6B
DTNA
ABCC2
F11
SORT1
DEFB114
DEFB113
BORCS6
TRMT2A
RANBP1
SYNCRIP
BBC3
DPP3
IFI16
ZNF814
GLI2
GPC4
OR2T1
CXADR
RFLNA
TACC2
SLCO5A1
OGA
SAXO1
POLB
DHRS3
NUAK1
UBQLN4
LAMTOR2
EPHB3
HMGN1
BAHCC1
DNAJC7
CTNND2
ANAPC15
PSME2
CD2BP2
HOXB1
KNTC1
ERMN
SLC6A8
MEX3D
TRIM13
ID1
C22orf39
MEIS2
SPTLC2
ACSL6
PREP
UPF1
PIF1
MYEOV
HSPH1
DHX8
HES5
PANK4
CSRNP2
PPP1R18
NRM
ESRRA
CATSPERZ
EMC9
TIAL1
TSPAN5
NKIRAS2
SH3GL3
LLGL1
DCLK1
EPHA4
SHC3
STRA6
RABGAP1L
GADD45A
SLC25A11
RNF167
ABLIM1
LONRF3
WASF1
CDC40