ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX130061 | BJ
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◣ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

MTRNR2L2
MSH3
DHFR
RGPD1
RGPD2
MTRNR2L8
EEF1A1
MTRNR2L9
MAMDC2
EMILIN2
MTRNR2L10
TESK2
MTRNR2L1
CD22
VCPKMT
MTRNR2L6
TMEM87A
GANC
PCGF3
RNF125
EPB41L2
HK1
DEFB107B
DEFB107A
DEFB105B
DEFB105A
GID4
ATPAF2
SPON2
CEP164
BACE1
FIGNL1
PCDH9
OR10A6
TMEM242
EXOC6
ZNF397
DIPK1A
MCF2L2
RAB6A
ACSF2
MUC5AC
KCNK1
NRCAM
FOS
USP30
CTAGE9
ERGIC2
RPL6
PTPN11
OR7A17
OTUD7B
CSPP1
DRD1
FLRT2
NUTM2D
FNDC3B
SCGB1C2
SCGB1C1
SLC8A1
ESM1
DACT3
TTBK2
CAAP1
GRIP1
SIK3
LTF
FAM120B
CNGA1
PTPN1
SH3BGRL2
ALG5
TRIM48
SACS
KDM4D
CWC15
ANKRD53
FRMD5
NFAT5
PHOX2B
MAPK10
TLR4
ABCF2-H2BE1
ABCF2
CHPF2
TMEM263
SMC1B
RIBC2
RNF113B
PCDHGA2
AMACR
CERS6
TGM5
COPS7B
RAB23
DPP3
SPTLC2
LSG1
PRKACB
KDM3A
CHAMP1
A4GNT
RFPL4B
OR13C2
SLC9B2
HMGB1
USPL1
MKKS
SLX4IP
ABCB1
DUX4
MRPL35
SIGLEC15
MRGPRE
MYC
DHCR24
SAP18
KIF4B
TAF4B
TRPC4
RASAL2
SLC2A12
DIABLO
SPRTN
EXOC8
NFATC3
WDR75
ASXL2
CDC42EP3
CCDC171
ZNF80
RAPGEF4
SRPRB
NUP153
NEK8
SETMAR
ATP6V0E1
STEAP1
TMEM196
EFCAB1
CAV1
KRTAP1-1
CDC42SE2
KRTAP2-1
RHOB
H4C11
ZNF615
ARHGAP22
CMAS
ALKBH5
NLRP1
MICB
GMPR
VNN2
YWHAZ
STEAP1B
ZNF214
NLRP14
PRDM7
TNFRSF19
HCRTR2
CDKAL1
CR1
ZNF385B
FRMD3
AHCYL1
DNAJB2
ROBO4
EMC10
MRGPRX3
RERE
OTUD1
MYOT
DLC1
RBFOX2
EPB41L5
MNAT1
PERP
CMTM6
PROC
FGD3
SESTD1
NPFFR1
PURA
DEFB134
IL17A
ZNF337
SCG2
MED9
AGR2
RXRG
ZNF74
LATS1
CEP85
NCOA6
GPR107
LIG4
ABHD13
SYN3
CEP78
UBE2D3
MIPOL1
DDX52
POPDC3
SENP7
RAB21
NPM3
KANSL1
PTPRB
ABL2
WLS
TSC22D1
ARID1A
POU6F1
OR6C2
NRG1
SF1
RCN2
ARSJ
RRAS2
FGF5
SYT2
S100A16
CYB5R2
TRIT1
CSAD
PSMC6
S100A14
NEUROG2
CCDC9B
ZFYVE1
SOD2
WTAP
KRTAP2-4
TMEM219
TAAR2
KRTAP2-3
WDR26
SCAF4
ARHGAP24
SLAIN1
DKK3
IGSF11
FBXL4
SEPTIN2
HDLBP
TEX55
RNF217
BAZ2B
TRAK1
MANF
SESN1
HDHD2
GJA9
VPS26B
NCAPD3
SMIM14
DMAP1
ZNF852
PRPF39
CALU
YWHAE
DTX4
SELENOI
ADGRF3
LRRC58
TMEM252
CMTM1
CNOT6
EID1
PDIA5
MPHOSPH8
POGK
EFCAB3
SOX2
OR4F5
HMCES
EXOC5
AP5M1
PDE4B
COBLL1
COL6A3
ARID1B
ZNF570
ZNF569
ERBIN
FBXL20
RABGAP1L
SP9
IGDCC3
CALCRL
CREBL2
METTL3
KRTAP10-7
URI1
WASHC2C
USP10
SLC43A3
SHISA9
GOPC
MMP16
IAPP
F13B
CALD1
PRRC2C
FBXL14
CPM
ECT2
ZNF624
PDE4DIP
FRMD4A
PRR23D2
PRR23D1
GORAB
THAP12
GVQW3
WNK1
PRIM2
RETREG1
PIGL
NCOR1
VPS13D
RNASE9
CAPNS2
C10orf120
RBPJ
ENOX1
FBXW7
UBE2K
SPECC1
DHX33
PPWD1
CENPK
ATP6V0D2
ODAPH
SOX6
TBC1D23
LYPLAL1
ENTPD7
MAML2
TNNI3K
FBXO11
SKA2
PRR11
NPY1R
STIM1
LRRC36
NTRK2
STK31
CMYA5
MTMR6
BTN3A2
EHHADH
SRP72
TPBG
ANK3
CDH11
PHF3
MFF
MAP3K7CL
EIF5
FRAS1
TNIK
PFKP
COPS4
B3GALNT1
BSPRY
MRPS9
FBXO25
FABP9
PPP1R8
HNRNPR
NCKAP1
SPA17
SIAE
SLFN11
TXLNB
AGAP5
MOBP
DDR1
ABLIM1
SPATC1L
IL21
RBM7
C11orf71
FABP6
LLPH
VPS33A
ARMC5
SLC18B1
RREB1
SGPP1
PSG11
TMEM255B
ZNF319
USB1
OR2K2
KLF5
RAP1A
SLC7A11
BUB3
FAR2
PTK2
DDX46
KIAA0895
ANLN
THYN1
ACAD8
KLRD1
CLASP2
MED23
EPHB6
ELF1
TRAF3IP2
FGF20
TRAPPC3L
CLEC14A
ALPK1
ALDOB
BAAT
FMN1
DGKH
MAGEF1
ANKRD13D
PRRC1
SLC10A7
STPG2
STARD6
C18orf54
C16orf95
ITM2B
DLX5
PTHLH
ACIN1
PLA1A
C14orf119
ACTR5
ARHGAP32
RPN1
NEDD8-MDP1
NEDD8
GMPR2
INO80D
TSTD2
NCBP1
GAS2L3
COL4A2
COL4A1
POGZ
KIF15
KIAA1143
FAM122A
ITGAV
TFAM
ARL6IP1
FBXL17
PSG2
DBT
MERTK
NLRP10
ZNF532
TIAM2
PARP2
KATNBL1
RNF115
POLR3C
RPS20
SLC19A2
C16orf87
OR4F6
KRT86
CRISP1
FZD7
ANO3
UTP23
NBPF9
P2RY12
GLYATL2
GIMAP7
CNTLN
C18orf12
SMCHD1
TAF7
TRIM23
TRAPPC13
SHLD3
FAM53B
SFXN2
ARL3
SREK1IP1
CWC27
PSG6
DYNLL1
NREP
MEF2A
TMED5
CCDC18
TAS2R39
SRSF9
LOX
TRPM6
BTG3
PRKG1
SLC5A7
OMD
GET1
EBLN2
GJA10
LRIG3
KIFC3
LIMS1
TPM3
PTPRO
UBB
P2RY14
FRYL
CIZ1
NBPF15
SCG3
OPALIN
MBTPS1
ZNF136
SLC48A1
ACER3
MCOLN2
SOX9
ARCN1
CROT
ZFY
STAG2
MSMB
CXorf38
ANXA2
ANKRD44
SHOC2
BBIP1
G2E3
NAP1L1
NTN4
ST7L
CAPZA1
MME
MTF2
TMCC1
VPS37B
NEK3
ADAMTSL1
COA6
ADARB1
CPS1
MAF
ERMARD
RDX
KIF3A
CACNA1C
RSAD1
TSN
LOC107986453
WASF3
SPECC1L
SETDB2-PHF11
SETDB2
CAB39L
HIF1AN
SLC17A5
UEVLD
CUL1
ZNF234
NDUFB8
POU5F2
COA3
CNTD1
PSME3IP1
FREM1
GPAM
MACO1
ZFYVE9
GPR52
SLC16A7
CCZ1
LAMTOR5
IGF1R
OR52L1
RCN1
NBEAL1
KDM1A
CSTA
C1orf94
GTF2H5
POM121L2
DYNC1H1
PDCD5
TP53TG5
ADGRL2
FJX1
MAT2A
DDHD1
TNIP3
FNTA
MYO10
TMEM117
GPATCH8
TMEM248
POLR2J2
SMARCA2
DTNA
CFAP20DC
LCLAT1
TLK1
CD58
LRRIQ3
FPGT-TNNI3K
FPGT
ARL15
ZBTB44
OAS2
BHMT
FAM200B
UQCRH
LRRC41
PTS
CDC6
REV1
TMOD3
SLC38A4
UTP4
DERPC
CHTF8
HMGCS2
HPS4
SEC16B
CHGB
CLUL1
CTSC
GNAQ
JMY
PRR4
CDIN1
LYRM7
JAK1
AKNAD1
FAM111A
SLK
KRTAP4-12
NR3C1
ARPC1A
LIN28A
PDE4D
CUEDC1
TP53INP1
SH3PXD2B
ESPNL
MEX3B
TBC1D19
CAPN2
PRIMPOL
CASP3
CNOT10
PIGF
CRIPT
TMED9
LEO1
PAOX
OR52N4
MRNIP
MARCHF10
ECHS1
DNPEP
PRR14L
STK38
GCA
PSMF1
IDE
NAT1
DEPDC5
KCNE1
CCDC68
KCNE1B
DCAF4L1
TP53
COX8C
TMC1
FAM168A
WRAP53
ZFP62
FAM133B
TWIST1
LIN9
SRR
SMG6
AADAT
OR2A12
STPG4
EBAG9
TPD52L1
HSD3B1
HNRNPLL
EXD1
CHP1
BRWD1
RPS27A
CLHC1
RALGPS1
MIER1
DNAI4
HHIP
CACNB2
CCDC81
FRA10AC1
RTF2
PDGFD
C12orf65
FBXO42
DAGLB
GGPS1
ARID4B
THEMIS
TMEM65
MAP10
TNFAIP6
UBAP1L
CLDN12
PPT1
PPARG
SLC36A1
GATB
KRIT1
ANKIB1
ZNF326
EGLN1
MBD2
MYO1H
NOA1
PAK2
FUT8
ZNF583
PPP4R3B
BMT2
LRRC66
IFNA5
DLGAP1
ST18
KIAA1217
SGK1
VEGFC
STAM2
FRG1
TTK
NDEL1
ZCCHC4
IGF1
BDH1
WASHC1
SMC6
GEN1
IARS1
VSTM5
KATNAL1
CRIP3
GIGYF2
FAM222B
KRTAP3-1
GBX2
RCOR3
ATXN7L1
RNF130
PPM1B
RAB28
PLXDC2
NUMB
FAM210B
RABGEF1
SBNO1
COX7A2L
TSC22D2
MCUR1
TBCC
BICRAL
TPX2
ZC3H8
RCL1
HCLS1
CYP19A1
CD86
CAPRIN1
SGMS1
HECTD2
PHACTR4
CENPF
MCM6
RPS27L
TJP1
OR10Z1
GAS2
TAOK1
PCID2
CUL4A
MINPP1
VDAC3
EPSTI1
GASK1B
VEPH1
SLC41A3
HIPK3
KIF27
NOL8
CENPP
BSX
H2BC4
H2AC6
XKR6
MOK
GLRX3
MRTO4
EMC1
MAST4
DHRS7
COMMD8
BLID
RNF14
GGNBP2
SERPINB11
OR6C4
HELLS
PRKCA
RIPOR2
CDK1
TMEM260
ABCD3
HERC1
SCAMP1
ACAP2
SPOCK1
SHISAL2B
CRTAM
CHRM5
ZNF474
VMP1
PTRH2
C3orf35
TACC1
TASOR
COMMD7
TM9SF3
UHRF2
TIE1
NUBPL
LMO7
TBCEL-TECTA
TBCEL
JAM2
DDX60
TRIM26
MLF1
EIF4E
SYDE2
CEP162
CREB1
PSMA3
GDF11
ETV1
NUFIP2
TMEM258
FEN1
ZWINT
CLDN10
LAPTM4B
L3MBTL4
RBM12
CPNE1
HARBI1
ATG13
TBCK
AIMP1
ROBO1
SNIP1
C11orf80
OR6X1
LOC100996413
CHRNE
LOC100506422
ZFX
ZNHIT6
CBL
SCP2
GLYATL1B
WDR25
WARS1
LSAMP
IQSEC1
ABRAXAS1
BLM
MPC2
DCAF6
ZNF655
CABCOCO1
MED7
CD2
RACGAP1
STRIT1
ZMYM2
ABCA10
ZNF565
RIMKLB
TFDP2
ZNF146
RAE1
FAM153B
NFE2L2
FAM200A
SRGAP2B
CHD1
PTCHD4
FAM72C
FAM72A
RELL2
HDAC3
TMEM30B
CNTRL
CHSY3
DNAJC15
PRPS1L1
ZNF576
IRGQ
NOL6
VRTN
LMO2
TMEM106A
PGM5
CLN5
MTMR10
MOGS
MAPK4
GGH
NBPF1
AXDND1
RARB
RGS7BP
PAFAH1B1
P4HA1
HELZ
CYP3A43
ZNF814
PPP2R5A
GDAP1
ENAM
RPL36AL
MGAT2
LANCL1
BATF
AHCYL2
MAP3K13
SHQ1
PRPH2
SPOP
UGT1A9
RNF4
ANGPT1
SERPINB4
SLC22A15
SCOC
OR2A1
OR2A42
PEX12
ACADL
ZBTB18
TENT5C
UBA1
MARK3
TRIM11
ZNF250
ALG14
NRARP
REST
CDX2
NES
NAV2
FAM227A
CBY1
TMPRSS11E
DPPA5
ARHGEF38
FRG2C
PIPOX
OTX2
ZNF483
METTL11B
WDR74
DNMBP
MUC1
ID3
ZSCAN2
CACHD1
AGO1
NDUFB5
MRPL47
LFNG
DUSP6
TCF7L1
RMND5B