ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6750798 | MDA-MB-231
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◣ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

FRG2C
TNFRSF6B
NRARP
MUC1
FRG2
RPEL1
FAM227A
CBY1
MTF2
COL23A1
GALR1
SPATC1L
CCDC200
PDE4DIP
CBWD5
MTRNR2L1
CGRRF1
CYP4F11
CBWD3
CBWD6
FAM153B
SEC22B
EEF1A1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
ZFAND3
C12orf29
NUDT4B
NUDT4
FAM240C
SOX2
PRDM4
C6orf89
PPIL1
HGC6.3
CXCL3
NUDCD1
TTC12
SPAG1
ZNF718
WDHD1
SOCS4
ELMOD2
ARHGAP39
ADGRB3
SAYSD1
SRPK1
NBPF1
GNPTAB
TMEM14B
OPRL1
LKAAEAR1
PERM1
BIRC2
NPDC1
ENTPD2
MOCS1
EBAG9
KRCC1
TMEM217
TBC1D22B
PPARD
RBM19
TMEM71
PHF20L1
POLR2J3
MSRB2
EMC2
GPAM
MTMR2
RTRAF
LMBRD1
NBPF15
ATL1
STARD4
FANCL
MAP4K5
ZSCAN30
WASHC4
NUF2
ZNF322
MTCH1
PCMTD2
AARD
DENR
HCFC2
GLT8D2
TRPS1
TAP2
POLR2K
FBXO43
ARL14EP
DAB1
TMEM260
OMA1
MIER1
DNAI4
LYSMD3
PPP1R12A
ZNF330
SH3TC2
ZNF451
FANK1
DDX10
FANCE
SEC31A
THAP9
GPR89A
ZNF311
ANKRD46
TMEM30A
FDXACB1
C11orf1
PSMD6
ATG14
ZSCAN31
GAGE2A
CDC7
SECISBP2
TNFRSF11B
COLEC10
MNAT1
CHST10
KIAA1586
MTHFD2L
COMMD10
TCF7L2
SUPV3L1
TBC1D7-LOC100130357
TBC1D7
EXOC5
AP5M1
FILIP1L
HLA-DRB1
LYRM9
TTC29
GMNC
GALC
NOTCH2
CMTR1
UTP20
SLC35B3
SNRNP48
FRMD4B
FAM200B
PIK3CA
CLEC12A
ACYP1
CNIH1
JRKL
CCDC82
ZC2HC1C
NRAS
ACYP2
SESN3
DHX35
ZNF391
ATG10
PLEKHH2
KDM4D
CWC15
SCFD1
DDX1
NAF1
STK38
SEC62
CR2
NAT10
ZNF202
DLG2
EFHC1
UTP23
TMEM126B
SMARCA5
LRRCC1
SERF1B
SERF1A
C12orf75
ZNF76
ARFGEF2
SIK2
ANKRD18B
LMCD1
SPATA7
KRTAP4-9
LRRC1
PCTP
PRMT2
HMGCS1
FDX1
NAPG
UBR2
FRA10AC1
GORAB
TEX9
RPP30
GLRA3
MMUT
CENPQ
KRTAP3-3
CTTNBP2NL
ZNF184
H3C2
H2AC4
MFAP3
FAM114A2
SLC35C2
MRPL27
EME1
SLC26A8
MAPK14
SLC30A9
PAK1IP1
C6orf52
FBXL5
GFPT1
COMMD8
DPH5
TRIM44
RPUSD4
FAM118B
HSD17B12
NEDD1
CCDC167
RNF38
TAF4B
SMC6
GEN1
C1orf53
RNF103
ZBED8
RLF
MTERF2
NIPSNAP3A
OSER1
CPQ
AFF1
RNF19A
CCDC88A
DNMT1
CD83
RABGGTB
PTGS2
RABEP1
OXR1
UBE2D1
GOSR2
PRKN
PACRG
WDR48
SCN11A
OXNAD1
DPH3
CRADD
FBXO48
APLF
FRMD6
RTKN2
HPS5
GTF2H1
ISOC1
NME6
SNX13
COPRS
ZFP69B
HACL1
BTD
EPN1
TTC32
LSM6
ACTR5
KIAA1109
MED20
BYSL
GRPEL2
ERMARD
MLH3
VSTM5
EXT1
USP53
PTP4A1
PAQR3
MTREX
DHX29
DSN1
SCYL2
DEPDC4
KIF2A
PGBD2
ELAPOR2
MAML2
PRRC1
TEX10
PXT1
KCTD20
KIFAP3
GBE1
CCN3
KRT10
GMNN
MAPRE2
CAST
BAG2
STX7
CEP126
ANGPTL5
MAPKAP1
OARD1
NFYA
ATXN7
H1-7
ZSCAN16
CLASP2
RBM7
C11orf71
PANX1
IL15
SHPRH
SLC13A3
UFL1
FERMT2
TP53RK
SGCB
EXOSC9
BOD1
SNX2
NDST3
MOCS2
EEF1E1
SUPT3H
MED23
GMFB
METTL15
KIF18A
KRTAP2-3
KRTAP2-2
SRSF11
MINPP1
PTGFR
SARS1
SCLT1
C4orf33
RPE
MAST4
SRP9
CENPC
SRBD1
SNRPB2
ECI2
KIF5B
H3C12
H2BC17
H2AC17
CRY2
REXO2
RAB4A
SERINC3
FAM91A1
PRKCI
CEP120
STK4
ACBD6
ZSCAN9
CEP135
TCAIM
STAMBP
OPN3
CHML
TOMM20L
TDP2
ACOT13
GPSM2
UQCRFS1
MYO1B
TMF1
CLK4
BMS1
DNAJC19
C6orf226
SNRPF
AP3B1
FZD6
NAA30
PPFIA4
KCTD8
DEPDC1
ZCCHC4
MRPL42
FARSB
PHLDA1
L2HGDH
DMAC2L
EDEM2
PPP1R3D
FAM217B
TECPR2
CINP
P3H2
RPP21
DEF6
DPY19L3
NOL10
OAZ2
SCGB1C2
SCGB1C1
CSNK2A1
C10orf88
MITF
SDHAF4
RNLS
LIPJ
ZPR1
APOA5
GPR89B
STX17
AKIRIN1
POFUT1
PLAGL2
TEFM
ANTXR2
LRRC37A3
FIP1L1
BCL10
CCDC86
CC2D2B
PARVA
KCNN2
SUCO
PACRGL
SC5D
MKRN2OS
TMEM154
EPM2A
MKRN2
PIP4P2
UQCRB
BBS12
MTBP
MRPL13
CCNH
TTC17
SUCLG2
NDUFAF2
ERCC8
CHMP2B
ZNF691
RDH5
BLOC1S1
SERPINB7
ITGA7
ADGB
SIPA1L1
MAPK8
AMACR
CFAP58
CSRP2
C18orf21
MAPK1IP1L
IFT57
INO80C
VAMP3
RCBTB2
VPS54
PAG1
CDKL1
CEP295
GCH1
MOCS3
DPM1
PDCD6IP
B4GALT5
SYBU
SEL1L
VPS8
CDCA7L
RFX3
MFSD2A
H2BC11
H2AC11
SLC25A46
AMZ2
PABPC4L
DCAF8
TMTC3
CEP290
ZNF35
USP17L20
TBC1D5
USP17L22
MRPL2
KLC4
EIF2S1
ATP6V1D
CRY1
HTATIP2
IQSEC3
MTOR
MCUR1
SLC25A27
CYP39A1
MYLIP
OGFRL1
RNF180
PAQR8
METAP2
FAM151B
KRTAP9-2
DPH6
CHD6
FOCAD
STX18
EXPH5
NCEH1
CLDN1
MMS22L
LRRC6
ZSCAN23
SS18
TFAM
TTLL9
DCUN1D5
CUL1
TWF1
NCSTN
COPA
GXYLT2
FAM174A
FIGN
RAD21
USP49
RCHY1
DCK
LNPEP
MED30
RAB33B
ZNF829
ZNF568
CD302
KHDC1
MSANTD4
TNFAIP8
PRKAR1A
OTUD6B
FOXO3B
SPTLC1
NUP54
ST7L
CAPZA1
BPHL
POLR1H
MRE11
ANKRD49
RALGAPB
PRPF38B
MED10
IDI1
EPS15L1
WDR37
UNC13B
TESK2
GOLGA5
DISP1
NBAS
ANKS1B
RAB28
DYNC2H1
KRTAP2-4
FAM102B
NDUFV2
E2F6
ZFPM2
SVBP
ERMAP
SCARB1
EFR3A
LCORL
RPP14
HTD2
H3C13
H2BC18
APPL2
DDHD1
C6orf118
MAL2
NAP1L1
DEK
RNASE4
ANG
ALKBH3
TICAM2
HMGCLL1
ANGEL1
CRBN
NFRKB
PRMT6
NEK11
ASTE1
HMGB1
DST
LRP12
USPL1
NCOA5
PHF3
TTLL7
TMEM263
MMAA
TMEM14A
INPP4B
PLPP1
GAGE2B
ANTXR1
TMED8
SAMD15
BTBD9
POMP
GAGE7
GAGE5
GAGE4
GAGE12I
E2F7
PELI1
OAZ3
VRK2
MAEL
ILDR2
PNPLA8
KAT7
UTS2B
CCDC50
CCNG1
SH3GLB1
PSMG2
CEP76
SEC13
THOC3
TRMT5
SLC38A6
PLRG1
TMEM45A
SLC25A4
PPWD1
CENPK
ALMS1
FYB1
GABRB3
RASAL2
ZBTB18
ARID5B
NME7
BLZF1
CXCL2
SRGAP2B
PTPDC1
USP6NL
TIGD6
HMGXB3
ZKSCAN8
PPP1R42
MYL12B
RGL1
DNAH6
OXSM
NGLY1
PELI2
PTS
RBM12
CPNE1
GNG12
L3HYPDH
JKAMP
LOC100287896
LIPT2
SPAG16
STPG2
ATP10D
RFX6
MYH4
DAZ4
DAZ3
PAFAH2
VCPKMT
NTAQ1
ACADM
ALG8
SMC5
DPYD
FAM3C
ITPR1
ARG2
CHMP4C
PHTF1
ATAD2B
LRRC39
ERBB2
PGAP3
KIF6
USP30
NREP
RIC8B
ZNF124
SVOP
TIMM23B
PARG
SMAP2
ERAP1
RFESD
TCTN2
NPL
SAMD12
DUSP12
ATP5F1E
TMX1
RPL22L1
TTC4
SNRK
MKLN1
DR1
CDC73
PIGF
CRIPT
TTC33
IFT81
TIMM10B
COQ2
FBXO4
ZSCAN26
COX10
EIF1B
CFAP43
ZNF133
BDP1
IQCH
AAGAB
NUP160
VPS37A
CNOT7
SAV1
NUDCD2
HMMR
NBN
H3C10
CNPY3
EIF2D
USP47
LONRF2
ATP6V1C1
H2BC14
H2AC14
SLC41A2
CTNNB1
H2BC4
H2AC6
ZNF491
ASCC3
ZW10
RGP1
MSMP
GBA2
VPS37B
PPME1
C2CD3
ALDH2
PPP1R21
LRRC8B
DGUOK
SH3RF2
ARL6
SDC4
GLO1
ELMO2
AGBL3
ARPC5
GPATCH2L
UBA6
RAB35
CSE1L
SNF8
RNF2
GNL2
PIN4
ROR1
RAD18
PCLO
MIA3
TDG
PRICKLE2
MYEF2
CTXN2
SELENOK
RWDD1
MSMO1
CCDC15
CMTR2
ANKRD17
MIPOL1
CTSC
UBXN2B
NEK4
APTX
DNAJA1
UGGT2
CEP83
SMCO4
SMIM15
SNX7
PSMD9
HPD
JPT1
ANKRD50
COX18
SCAND1
ING3
NDUFAF4
KLHL32
EPB41
CHMP3
IKZF5
ACADSB
RNF141
ZNF596
MAK
LRRFIP2
NEK7
RANBP17
BOD1L1
EML5
NEGR1
EBPL
SNAPIN
KDM3A
ARHGAP19
CDK17
LRRC74A
MEA1
TNPO1
HSF2
H4C1
H3C1
H1-1
ADH5
ZNF587
GEM
C5orf51
TMEM192
AP3S1
GCLM
SEC61G
IL6ST
UQCC2
ALDH18A1
TIGD4
ARFIP1
ZNF134
LAYN
SLC35D1
RFX1
GRAMD2B
TEX2
TXNDC16
SRSF6
PEX3
ADAT2
ZNF519
JHY
BIRC3
TP53BP2
HSD17B7
MRFAP1L1
PIGC
ZC3H12C
PI4K2B
PIGL
NCOR1
PDHX
APIP
ARFGEF3
MRRF
FOXN3
RUNX1T1
RGS2
C12orf73
NUP93
PLD1
ARMC4
SETMAR
NBPF19
OSCP1
NBPF26
NBPF14
KIAA0319
PSMF1
GNG5
ZCWPW2
AZI2
SPATA1
CPEB4
RBKS
BABAM2
DHRS4
SREK1
XKR9
LACTB2
TCTN1
TEP1
SAMHD1
FAM120B
SLC39A8
RBFOX2
TRDMT1
SCOC
GOLGB1
EEA1
TSPAN19
LRRIQ1
RBM41
ARRDC3
SYNRG
CDCA4
CLOCK
GREM2
KRTAP13-3
BTF3
FAM13C
FBXO38
TUBE1
FAM229B
HDDC2
DNAH14
TDP1
ZNF562
SLC35G1
TMED7-TICAM2
TMED7
CNTN5
CABCOCO1
TOMM34
HTR7
NET1
CFL2
EFCAB11
SMIM8
CTSO
TEAD1
ZNF112
RGS18
PRAMEF27
PRAMEF15
PLPP3
FOXJ3
FNIP2
PRPF19
CPE
DIAPH1
PPP1R10
MRPS18B
CBLB
RNF145
ZNF717
UBP1
TCP11L2
CHUK
OSBPL8
ALG9
BROX
AIDA
METTL25
CCDC59
GOLGA1
SNX5
MGME1
XPR1
TRIM31
KNTC1
TIAL1
INTS12
GSTCD
FER
COL19A1
WDR41
HFM1
BRD4
PCNX4
PELO
ITGA1
PRKAB1
GCNT1
KRTAP2-1
PSMA5
RPL10A
NHLRC2
DCLRE1A
RNF144B
HOMER1
AOPEP
BSN
YWHAB
MPHOSPH6
UBL3
SUSD5