ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3205373 | Head and neck squamous cell carcinoma
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◣ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

MTF2
NAV2
NRARP
IQCH
AAGAB
VANGL2
MAMDC2
RCOR1
TRMT2A
RANBP1
CCDC88A
FZD1
INTS12
GSTCD
BAHCC1
SLC33A1
NOTCH1
UNC13B
SNX16
JMJD7-PLA2G4B
JMJD7
WDR74
MLEC
WDFY2
VWCE
GFM2
ADAM28
TNRC18
LOC100129484
ATXN7L2
PTMA
ZBTB40
KDM3A
ARID2
TJP2
PEX3
ADAT2
POLB
MTRNR2L1
GBA
TRMT1
NACC1
NDUFB5
MRPL47
RAET1E
WDR36
HEXIM1
RFLNA
IPO4
KLF7
CEP63
ANAPC13
ZFAND3
OGA
TUT1
MRPS14
PER2
CFAP20
STAU2
ZNF335
PGK1
ZSCAN2
PTCHD4
F11R
SYNCRIP
RASAL2
LIMK2
MTRNR2L8
HSPH1
PPDPF
RTRAF
ASF1A
BARHL2
TSC1
GFI1B
MRPL48
TMCC1
FAM168A
CCDC152
PIK3CA
SLC9A9
COL9A2
ACOT1
HSPA4L
HMGB1
PYCR2
TUT7
USPL1
FAM227A
CBY1
PACSIN2
CYTH2
ZNF195
HEBP2
FRG2C
SOX14
ZNF37A
KLHL6
RAB23
KRT6A
MYEOV
LGR6
MRPL44
H4C12
NDST1
FNBP1L
SECISBP2
FRA10AC1
GSN
LSG1
SSBP1
ARIH1
YLPM1
DDX17
MTRNR2L2
MSH3
DHFR
KMT2A
FANCI
NOXA1
SLITRK3
FGF19
GABPB1
PAXBP1
TMEM205
CCDC159
RAB3D
BZW2
ANKMY2
TMEM88B
ANKRD65
CAPRIN1
ZBTB6
CHD8
MOB3C
PTPRK
PAN2
IL23A
CCDC200
OGT
CELA3B
FMNL3
MED23
ITGB1
JUP
KDM2A
ZNF440
ZNF426
MRPL3
AP4E1
LY6G6D
BCAS1
GOLM2
DKK1
CLPB
GRK6
ANXA11
SKIL
NREP
GBP6
UBTD2
MUS81
CFL1
ANAPC15
PHF5A
ACO2
BMS1
NUPR1
CYP2S1
ITPRIP
RMND1
ARMT1
PPP1R18
NRM
DKK3
SHC3
DSTYK
C17orf75
EIF4A2
MSANTD4
SOD2
WTAP
INSM1
KMT5B
PGBD2
MRPL21
IGHMBP2
TMEM132A
FSCN1
TMPRSS4
C8orf58
STMN1
SPIN1
RAPGEF5
USP30
ADRM1
CHD6
PAFAH2
CLTC
POLR3E
SLC29A3
SHF
GREB1
DUSP6
ALCAM
LMX1B
RARB
ESRP1
GPR137
PRKCI
C19orf67
DGLUCY
FAM83G
EDN1
SLCO1B3
H4C14
EIF3F
GALK2
COPS2
CEP41
ID1
TIPARP
RBBP5
MTMR1
TMEM242
AAR2
TMEM41A
PSME2
EMC9
RNF31
ZNF524
FIZ1
RPL27
H4C11
SLC25A45
FRMD8
TRAK2
STRADB
PPIP5K2
CYB5R2
COX16
SUGCT
MPLKIP
DUX4
MNAT1
SPHK1
TRDMT1
IRX4
SINHCAF
NCOA7
BRMS1
B4GAT1
MUC3A
PTGES2
MCCC1
SNAP23
STX16
ZNF106
OTUB2
TES
KNL1
CAV2
MRPS31
ALDH7A1
PHIP
RBFOX2
NUF2
FBXL19
NFIX
COL17A1
POLG
ZNF791
ZNF490
ADAR
NUP160
SLC44A1
GPSM3
CSRNP2
NSUN6
ARL5B
ZNF408
ARHGAP1
SLC35A3
SPATA12
GAS1
ZBED5
NDUFS3
KBTBD4
TMEM101
YEATS2
NPIPB4
YWHAQ
YDJC
CCDC116
MTDH
SRPRA
MIDEAS
CEMIP
ZSCAN9
MYMK
KLF1
GCDH
ABCA13
GET3
MARCKS
ZBTB8OS
RBBP4
HEXIM2
EXOC5
AP5M1
ITGB4
ATAD2
CACYBP
UBE2B
CDKL3
NIBAN2
N4BP1
NFKB1
UBB
C15orf62
TRIM48
MRPL42
H4C15
SPRED1
NPIPB8
GPR84
TEFM
GTF2H4
VTA1
NMBR
GTF3C5
PLPP2
RBM39
ARMCX5-GPRASP2
ARL2BP
ARMCX5
PPP1CC
TBC1D13
TBPL1
COMMD2
MAPK6
RTTN
LNX1
NASP
FAM220A
CELA3A
GTF2H2
TCF12
EIF3E
OLFML2A
ZNF627
SGCA
LTBP1
CHMP4B
DNTTIP2
SMUG1
C11orf49
ANKRD40
NCBP2AS2
NCBP2
MAP3K9
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
NFE2L2
C2orf42
DISP3
PIMREG
SMARCE1
ASXL1
SELENOH
MAPRE2
PRKDC
MCM4
NPIPB12
NPIPB13
PSMB7
USE1
ANKRD22
CCT2
RTN4
HMGN1
UBE2F
CUEDC1
NR6A1
PTX3
LPP
EFHC1
NTMT1
SLC24A1
SRSF6
DRG2
NPAS4
PHF21A
NDUFS5
WDPCP
MDH1
GTPBP3
ANO8
CALM2
CHD2
PNRC1
ZBTB26
BCAR3
ADGRF4
GTF2H2C_2
GTF2H2C
SCOC
KAT6A
MEGF9
GLIPR1L2
STK35
PALD1
KLHL24
RCOR2
FAM227B
DTWD1
ALG10
FRG2
ETV4
CLCF1
PAIP2
RALGDS
MS4A2
UFD1
CDC45
COPS7B
PDE6D
ZER1
RUVBL1
TRUB2
COQ4
EGFR
EXOSC2
SSBP2
MNT
FGD3
PCNP
SFT2D2
ESRRA
CATSPERZ
ID4
SNAI2
UNK
H3-3B
BORCS6
RBL1
POR
PPP5D1
CALM3
SLC3A2
SMARCB1
POLR2M
ACOT2
CCNL1
POLDIP3
CCNG2
GOLIM4
C16orf46
ZMPSTE24
RABGAP1L
CD55
GARS1
BRF2
WDR24
IFRD1
RAPGEFL1
ZKSCAN8
FAM98B
HNRNPDL
ENOPH1
TSNAXIP1
RANBP10
NME1
TRIP4
PIH1D2
NKAPD1
CHST15
FGF7
TMEM41B
ZNF391
NELFCD
FHL2
DMAP1
AGO1
OAZ2
UQCRQ
GDF9
ARL14EP
AADAC
NPIPB5
RPS7
LFNG
DLX5
GADD45GIP1
SMCO1
TCF7L2
ABCC10
PSMD3
CLEC2B
SPRY4
VIT
EDARADD
MACROH2A2
FIBP
MAP4K4
LRRC37A3
NHLRC2
DCLRE1A
CTSW
PDIA4
NEFH
FCHSD2
AQR
FGF1
CREM
BRWD1
RAB20
PC
C18orf21
SYT1
HR
CDK5R1
UBASH3B
KLF12
FOSB
HSPE1-MOB4
HSPE1
HSPD1
NAB1
IQSEC3
PLEKHO1
ERAP2
ZDHHC5
CCND1
TPR
ODR4
RAD23A
NPIPB11
CAMSAP1
C1D
AHSG
CTNNB1
CSTF2T
MEIG1
ZNF443
ALS2
ZNF326
GATA6
STK32C
LRRC27
IREB2
PRXL2A
SLC35E2A
USP6NL
MRPL16
EIF1AD
BANF1
RAB18
PRMT5
ZNF76
USP14
KMT2B
CPT1A
TMSB10
FXR1
ZNF561
BACH2
NSFL1C
PPIA
PDXDC1
USP47
ID2
H4C9
EPC2
TTC32
SDK1
BHLHE40
SERPINB5
ATF4
FAM83B
FANCF
ZNF33A
ONECUT2
TMEM68
TGS1
ANXA2
NR1H3
ACP2
SYAP1
GPR39
CDK12
PPP1R9B
PSMD14
ZBTB25
ZBTB1
C11orf95
HDAC9
RFFL
LTA4H
RBBP8NL
ZNF117
CCDC88C
HBP1
YWHAZ
LRRC8A
KYAT1
SCPEP1
DSG3
TSPAN14
CPNE2
BLOC1S5
SRSF7
ZNF292
SRSF3
RILPL1
CCDC24
IST1
FOXP1
AP2B1
METTL9
POC1B-GALNT4
POC1B
GALNT4
DNASE1L2
ATAD5
DPY19L4
IGF2BP2
TIA1
TINAGL1
FAM3C
ZFAT
DAPP1
SMC2
ISY1-RAB43
ISY1
GADD45G
C15orf40
CEP120
MTBP
MRPL13
ISL2
SFPQ
PCSK5
TOP3B
TMEM87A
GANC
PPFIBP2
TMEM102
FGF11
ZNF518A
PEMT
TMEM230
ERLIN2
ZFC3H1
THAP2
JMJD1C
C2CD5
PALMD
CCNJ
DUSP1
LRP6
UCKL1
SPINT1
TRIM29
FAM171A2
PHKA2
PBLD
HNRNPH3
BCL9L
PPARGC1B
ZNHIT2
MRPL49
FAU
KSR1
EIF2D
SNX27
FIGNL1
MLLT11
CDC42SE1
GFM1
FARSA
CALR
WDR27
C6orf120
SOX2
SYT2
SLC25A36
WASF1
CDC40
VCPKMT
CLP1
LY6G6F-LY6G6D
LY6G6F
ABHD16A
RAB14
WDR11
ZC3H6
KRT80
ALKBH3
CCDC117
SPRING1
RNFT2
POU2F1
ERCC6L2
TP53I3
RAD51AP1
C12orf4
ZNF354C
TTC14
STX10
IER2
TSEN54
CASKIN2
PMEPA1
FAM83A
PSMF1
CENPE
FETUB
GTF3A
EPB41L1
TPM1
ZNF184
FRY
CHMP1B
PSMD1
OPA1
SNX8
TMEM249
SLC52A2
FBXL6
ABLIM1
MAN2C1
ZNF124
ANKK1
NPIPA3
NPIPA2
RASA2
SHOX2
RSRC1
TIMM22
SLC36A3
HNRNPA1L2
LLGL1
COPS7A
MAPK8
TMC1
MKRN2OS
MKRN2
FKBP5
YIPF2
TIMM29
ANKRD39
HGS
ARL16
ZSCAN12
PHF14
PTPN6
C12orf57
PRPF18
ADO
PLEKHG4B
FOS
BAZ1B
PRDM10
SMG5
TMEM79
DPP3
AHNAK2
EMC4
KIAA1217
TEX9
ANAPC5
RFX7
KIAA0895L
ICE1
FANCC
FURIN
HEG1
NR4A1
NADK2
FRAT1
VDAC2
ZNF24
SPO11
DET1
SAXO1
RRAGA
ZFP36L1
DOCK9
PRKCSH
CCDC151
GMEB2
RPS26
ZNF668
ZNF646
HNRNPAB
NUDCD1
GPR158
SLC38A2
CA12
DEK
RMI1
HNRNPK
ZNF775
SIX2
DHX8
MCM7
AP4M1
MRPS30
UBALD2
HSPB3
ACOT7
ANXA8
HES1
OR2T1
GNA12
LRRC8B
NUP93
SLC9A1
ITGB3BP
EFCAB7
METTL15
KIF18A
ANKRD12
PTEN
KLLN
MED25
FUZ
KLF6
CD2BP2
ETNK2
MAPK10
KHDRBS1
LAMP1
NBPF1
STAT3
PRDM2
HS6ST1
WDR54
FEM1B
C2orf81
BACH1
PKM
HUS1
RCC1
SPRR4
ARHGAP42
TSPAN5
SIRT4
CORO2B
MEOX1
TANK
TLE3
ELOVL5
GNAL
DNAJC25-GNG10
DNAJC25
RBM25
DHX36
NR2E1
H3C3
H2BC3
KLF4
KLF3
ETV5
MRPS23
HOXA9
RGMA
SCAND1
ATP5MC3
PRADC1
CCT7
WDR97
MAF1
CGAS
SCAF4
GOLGB1
GABPB2
GID4
ATPAF2
TRIB1
RPL5
SUGP1
MAU2
SF3A3
INPP4B
SECISBP2L
FRAT2
POMGNT1
ZNF785
SS18
SLC20A2
MIDN
CDH13
NCOA5
ZNF189
MRPL50
CALM1
PRKG2
JRK
RPS29
TOR1A
FAM228B
LONRF1
SF3B6
AURKAIP1
BIRC3
ZDHHC2
ZXDC
CASC3
G3BP2
ZFHX2
THTPA
FKBP3
FANCM
MPHOSPH10
MCEE
GSTA4
TXNDC9
EIF5B
SNRPD3
GUCD1
ZNF799
TIAL1
RNF19A
GRHL2
DNM1L
TCTEX1D4
KANSL1L
SMC3
NME7
BLZF1
MEF2A
BTBD19
TADA1
LSM5
ZDHHC6
VTI1A
TLE1
LPCAT4
ZNF277
DOCK4
DNAH5
KDM7A
ARHGDIB
FAM107B
NIPBL
LDLR
MRPL53
UBE2D1
RHEB
MTERF1
COP1
ERGIC2
PDE4D
ZMIZ2
PCBP2
SRP14
COPB1
ATG10
H3-3A
SLC39A3
EEF1A1
VPS8
UBOX5
FASTKD5
NUDT3
OR2A1
RPS20
ZSCAN30
STAT6
COL4A6
COL4A5
SCAMP5
OR2A42
BARHL1
SNAPC3
FZD7
LMO4
MRPS15
ZNF750
UBE2E3
CTXN3
RPS3A
ZNF675
U2SURP
NUDCD3
TRA2B
CIPC
ZSWIM4
GTF2IRD1
BNIP1
SULT1C3
RS1
RNF121
PPEF1
PLEKHA2
LOC100133315
SMAD3