ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10407085 | KYSE-70
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◣ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NDUFB5
MRPL47
SMCO1
DNMBP
PHF5A
ACO2
PPT1
FAM227A
CBY1
NRARP
HMGB1
MED25
FUZ
PXMP4
ZSCAN2
CYP1A1
MAMDC2
MATR3
WDR74
GRK6
MAST4
MCCC1
FLG
SLC25A36
DDX17
MTF2
CCT2
NOTCH1
DHCR24
PYCR2
LMCD1
COA6
C3orf20
RFLNA
OR13C2
PTMA
SPRY4
SIX2
FBXL19
CYTH2
CDC42EP3
ZNF148
NDUFS5
ZNF80
SPEF1
GSTO2
LYPLAL1
TYMSOS
TYMS
PDIA4
EXOC6
TMEM88B
ANKRD65
PIK3R3
PIN4
SLC16A13
SOX2
STK31
ADH7
SINHCAF
ABLIM1
HGS
ARL16
ISL2
UFD1
CDC45
ABCC1
LFNG
TMUB2
DKK3
SAXO1
RRAGA
FOXO6
TESK2
PSPH
CCT6A
ALDH3A1
GOLGB1
ECT2
HMOX1
KLHL24
MFN1
ZNF775
ARID2
TDGF1
PER2
POMGNT1
NEBL
PIK3CA
MUC1
VWCE
IQCH
AAGAB
H4C14
H4C15
EFHC1
PPP1R15A
PLEKHA4
KNTC1
METTL9
ARIH1
PIF1
ST6GAL1
IFRD1
ZFC3H1
THAP2
SH3GL3
TLX3
ANKHD1-EIF4EBP3
ANKHD1
ZBTB6
MOBP
ZNF608
VASH2
MMP10
ESRRG
SNAPC3
KCNJ15
CNKSR3
TGIF1
RRBP1
ZNF304
WBP11
C12orf60
F11R
SPAG4
RARB
PPME1
C2CD3
PIK3C2A
NDRG4
TOMM40
YLPM1
BCL2L11
ABL2
SRSF7
KMT2B
PIPOX
PLA2G6
LTF
PSMB7
NKIRAS1
BLOC1S4
NR1D2
ADPGK
G3BP1
CPT1A
ETFB
TMEM17
GADD45A
PALMD
NRCAM
OGA
SFPQ
PSMB6
FAM220A
H2AZ2
SDHD
RNF20
TRIM48
PWWP2A
ARHGAP4
CCL26
LMNA
DPP3
ZCCHC12
MYOF
CELSR3
PRR15
SENP2
ANXA11
ABCC5
OAZ2
ACSL6
ELOVL5
COMT
RSF1
AAMDC
OGT
RASAL2
SLC25A11
RNF167
DDX5
CEP95
STK32C
LRRC27
ABCG1
KRT6A
ZDHHC5
TIA1
AKR1C2
PAX6
ABHD11
LYRM1
DCUN1D3
HACL1
BTD
TUBB
MDC1
MCM7
AP4M1
KMT5A
OSCP1
PRDX1
PLA1A
ZNF680
HDAC9
WDFY2
RBM39
CLUAP1
RAPGEF5
ZNF273
FER
TAX1BP3
EMC6
LGALS8
ERGIC2
NDST1
YES1
ZSCAN9
CDK12
GET3
ANAPC15
PSME2
CSRNP2
EMC9
SHC3
EXOSC2
NME7
BLZF1
CHD6
JMJD7-PLA2G4B
JMJD7
PCNP
SLC33A1
MSANTD4
CEP63
ANAPC13
PIMREG
UNK
H3-3B
PSME3IP1
GDF5
BBS7
CEP250
CAPNS2
RSPRY1
STAG3
GPC2
TBC1D31
TNRC18
LOC100129484
RAB30
LPIN1
TOMM40L
APOA2
TMTC3
CEP290
SNCA
RTN4
GTSE1
CAPRIN1
SH3BP4
LIMK2
WASF1
CDC40
PTCD2
MRPS27
CALR3
C19orf44
UBQLN4
LAMTOR2
SPAAR
NONO
RBMX
ERV3-1-ZNF117
ERV3-1
TXNRD1
HES5
PANK4
TRADD
HSF4
FBXL8
DST
TUT1
SENP8
MYO9A
EP300
CEP70
ATP2C1
SIN3A
TES
ARHGAP27
CGB1
MIDEAS
FXR1
ITGB5
SHF
ATAT1
OARD1
NFYA
DMWD
SLC35E2A
HTATIP2
C1QTNF7
ZCCHC8
HEBP2
TPM1
VPS8
EMSY
SAPCD2
EPHB3
DENND4A
AHSG
TCF4
SPHK2
RPL18
NFX1
DHX8
ETV5
NARF
CRYGB
GOLGA6A
ZFX
TRMT2A
RANBP1
TSNAXIP1
RANBP10
ANKRD54
EIF3L
FGD3
MEX3D
ZNF627
ST6GALNAC2
NWD1
PRXL2A
CFAP77
SPRING1
RNFT2
UMAD1
TTF1
NUP160
TBC1D17
AKT1S1
WBP1L
AMELX
FGFR2
ESRRA
CATSPERZ
CDK5RAP2
MIDN
SDE2
MUS81
CFL1
ETV6
ARHGAP19
SCNN1A
LTBR
SLC25A25
TMEM205
CCDC159
RAB3D
NAIF1
PFKM
COL9A2
VEZT
FGD6
COPS7A
TMEM221
IER5L
TIAL1
DDR1
DUSP6
NDUFB4
TUBB4B
HEXIM2
EIF1AX
PSAP
IGBP1
PBLD
HNRNPH3
TTC39B
NCOA4
TSEN2
MICAL2
CRMP1
KDM2A
ERVH48-1
YDJC
CCDC116
TAGAP
EIF2B5
CHM
RAB36
RSPH14
MAP3K5
CDC37L1
TYW1
SBDS
LOC100509620
SPAST
REEP6
PCSK4
AKR1A1
PCBP2
RPS6KB2
EMP1
TOP1
DNM2
TIGD6
HMGXB3
HNRNPUL1
BAZ2A
KBTBD2
NTMT1
GPR137
MYCL
NEFH
TCIM
PKP2
ANO6
ADRM1
SUFU
ACTR1A
GNA12
VIT
UBL7
RABL3
GTF2E1
PSPN
ALKBH7
FZD2
CEP41
TSKS
AP2A1
CCDC88A
RAG2
IFTAP
TNFAIP2
RAB5C
WDR36
MTHFD1
ACBD7
ITGB8
PSMD3
PIGX
CEP19
ZBTB45
MKKS
SLX4IP
TRIM28
ZNF695
RNF26
RPL17-C18orf32
RPL17
C18orf32
PELATON
M6PR
KLRG1
PLCH1
ITGB1
UBE2T
UBE2N
ANKZF1
IFRD2
DGLUCY
MAMSTR
ENDOG
EGR3
TINAGL1
POLR3E
CTSZ
SH3GL1
CHAF1A
KLK12
KLK11
ALDH3B1
SHBG
FXR2
LRRC8A
KYAT1
TPM4
TRIM2
LIMCH1
TSPAN13
RAB11B
TUBA1C
C15orf40
PLXDC2
HIP1R
VGF
CHST12
TMEM258
FEN1
PPP6R1
SWI5
GOLGA2
RANBP3L
KRTAP3-1
AP3M2
TFB1M
MAGT1
COX7B
OSBPL1A
TTF2
YBX1
KRT5
RABGAP1L
SYNE2
NFE2L2
TMEM44
CBLC
CD2BP2
IPO11
IREB2
G3BP2
HNRNPC
LRRC23
RAPGEF1
EIF3D
TMCC1
PELI1
POLR2M
UBR2
OTUD3
TCERG1
VIPAS39
AHSA1
KALRN
MAP2K7
TMCO2
POLDIP3
CSNK2A1
FTSJ1
ACTL6A
ENKUR
PICK1
TMEM52
CALML6
RNF115
POLR3C
U2AF2
ZNF195
CTTNBP2NL
ZNF624
RAP1A
SLC2A4
XXYLT1
RAB5B
GOLGA6B
ZNF92
PLA2G1B
NDE1
MARF1
TRIP10
GPR108
ONECUT2
TLE3
FEM1A
SELENOF
HS2ST1
SYVN1
DDX3X
NASP
KLF1
GCDH
MFAP5
ETV1
SDCCAG8
CEP170
KMT5C
ZNF8
ZNF24
LRP8
AP2M1
SCAF1
RRAS
ERRFI1
PLEKHG1
CCDC146
MCTS1
OXNAD1
DPH3
SVIL
MEOX1
ZNF791
ZNF490
CEP97
CES1
AKAP14
PRRC2B
KIAA0895L
IP6K2
HSPA13
KLHL5
DIABLO
NEK2
PLA2G3
TIAF1
EDN1
GCK
SOX6
ZNF428
C11orf58
TRIOBP
NUDCD2
HMMR
GPR158
TNFSF13
SENP3
CNPY2
BUB1B
KCNAB2
TMEM41B
SLC20A2
UQCRQ
GDF9
DYRK1B
COX8A
DYNLL1
RBM22
CELA2B
KIFBP
C8orf58
ITGB4
TMEM143
SYNGR4
EXPH5
OTUD5
LDHA
SMPD3
FZR1
COL17A1
MRPS30
PQBP1
TIMM17B
RNF217
TMC1
PPP1R37
TMCC2
NEMP1
COBLL1
SLC3A2
CTH
SLC4A2
CDK5
CDK16
C8G
LCN12
TCOF1
FBXW5
TCF3
SCOC
AHNAK
SLC25A45
FRMD8
CD109
HSPH1
TMEM107
TPGS1
EVI5
PPM1B
TSPAN31
AGAP2
MPP7
DYNLT3
SORT1
NR6A1
SIRT4
MTA3
KCNG3
MYLPF
TBC1D10B
NFATC3
CLDN24
CLDN22
DACT3
NCBP2AS2
NCBP2
ARF4
INTS9
HMBOX1
TMEM33
STARD7
LRRC45
CENPX
SYAP1
MRPL34
DDA1
ZNF513
TRIM29
PHACTR2
ZNF286A
PRICKLE3
CALCRL
NFIA
MPDU1
LOC100996842
CD68
CDCA3
TAB2
CCDC171
HNRNPAB
HSD17B12
TBCCD1
DNAJB11
MORC3
DDX41
MTPN
LUZP6
ICAM5
ICAM4
SLC7A5
TEAD2
DKKL1
LYRM7
MAP3K2
SLC35B4
DNAL1
USP13
GRN
ZFP36L1
ACTR2
FANCC
SPARCL1
NOP53
ASPM
DBNL
ZNF250
EVI5L
USF3
GSN
H2BC8
H2AC8
EPHB1
UBC
HECTD3
MAD2L1BP
GTPBP2
CBX1
ARL14EP
USO1
QTRT2
CCDC191
ABI1
ADH5
RFWD3
PSKH1
STAP2
MPND
USP1
SLC48A1
GPAA1
EXOSC4
MALSU1
EFCAB12
CLPP
DNAJB5
RPL15
RFX1
CTXN3
LONP1
CATSPERD
CRYGS
EOLA1
EOLA2
PARS2
C20orf96
TPCN1
FZD3
IQCD
DAAM1
FBXO16
STAT2
APOF
CD46
SPTY2D1
CFAP20
PHLDB2
PAXBP1
IPO4
FBRS
LSM10
FTL
FAM32A
ZBTB20
NPDC1
TIMM10
ZBTB17
ZNF384
XPO6
PHF14
LARS1
BUB3
LPIN2
ZNF408
ARHGAP1
HSPA5
IFT80
SLC7A11
SMC4
RIOX1
IVNS1ABP
CRTAP
TMEM59
TCEANC2
KRT8
EPB41L1
PRKAB2
GET4
ZNF57
H2AX
PLTP
VPS26C
U2SURP
RPS5
MMACHC
AKIRIN2
ZNF292
POLR1F
LSG1
CDR2
RNF7
TMX2
MED19
POU2F1
CNOT3
DNAJC16
CASP9
ZNF500
STARD3NL
DDX50
SOST
ZXDC
CYTH3
SIPA1L1
PGM2L1
PLEKHG2
KLHDC8A
POLG
PCNX3
MAP3K11
ZNF749
PLCD3
ACBD4
NATD1
SERINC3
PTPN6
C12orf57
ZNF107
EEF1G
UFC1
SMARCAD1
FAM126A
ZSCAN20
PDLIM1
SARNP
ORMDL2
PIH1D1
ALDH16A1
KRT77
HBP1
NDUFS7
NDUFS2
ADAMTS4
PNKP
SELENOK
PLEKHM2
JAG1
NCLN
UGT2B4
SPAG8
HINT2
CYP2U1
ZMAT2
TSTD2
NCBP1
FZD1
NEURL4
CEP152
SSBP1
GHITM
PRMT1
COX14
ATG2A
FAM210B
AURKAIP1
SEC24C
GATD3B
GATD3A
PODNL1
DCAF15
NUDT19
TULP2
NUCB1
CYCS
ETV4
RNF5
AGPAT1
ARNT
CLDN1
INTS7
DTL
MDM2
FOXP1
LMAN2L
ZNF687
MRFAP1L1
SEPTIN9
TNFAIP8
CMSS1
SBSPON
CCDC130
UTP23
TOM1L2
DRC3
SART1
TNFSF9
CEP20
HDGFL2
PPP2R1A
KIF11
SNRPE
MIGA2
PROC
SOAT1
ODF2
PUM2
MCM3
OSCAR
NDUFA3
ZNF443
PMM1
DUS3L
TTC16
PTRH1
GOLIM4
TLE4
ZBED5
DEDD
AP3D1
PARP6
ING4
SETD1B
HOGA1
DNM1L
PRCC
KDM4A
HNRNPA2B1
CBX3
BORCS6
ZFYVE1
ELL
TNRC6B
SPEN
SSR4
IDH3G
ZNF764
ST3GAL4
RALY
NSUN4
GSK3B
RUVBL2
GYS1
TBC1D23
PTBP1
ELP3
ECSIT
ZCCHC3
CTNNA1
LRRTM2
CDK1
PHKG2
ENAH
DUX4
SMARCA2
REST
CDX2
NES
NAV2
TMPRSS11E
DPPA5
SACS
ARHGEF38
FRG2C
OTX2
ZNF483
METTL11B
ID3
MTRNR2L8
CACHD1
AGO1
NRG1
TCF7L1
RMND5B
ANKRD1
CD99L2
LRRN1
MTRNR2L1
SFRP2