ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5286344 | hESC WIBR2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◣ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

MAMDC2
TMPRSS11E
NRARP
ZNF483
SOX2
SMARCA2
REST
OTX2
NTRK2
DPPA5
PIPOX
GOLGA6D
METTL11B
VCAN
ZSWIM3
ACOT8
TCF7L1
DNMT3B
APOBEC3F
CDX2
FAM222B
PHC1
ZSCAN2
SLC7A5
LEFTY1
FGF1
CACHD1
SACS
ETS1
HESX1
SOX6
LEFTY2
LZTS1
MTF2
ARHGEF38
NES
SLTM
SFRP2
NRG1
BCOR
RASGRF2
FAM227A
CBY1
DUSP6
ANKRD1
TGIF2-RAB5IF
TGIF2
SRRM4
MFSD4B
FLAD1
DUX4
ZNF608
POU5F1
DIDO1
NANOG
GAD2
DAGLB
GOLGA6C
GIMAP5
NFE2L3
SLC46A1
SPATA45
PRICKLE1
DNMBP
CD99L2
PSMD9
HPD
DEFB114
DEFB113
SAMHD1
FZR1
RMND5B
SHCBP1L
VENTX
HES3
ICMT
APOBEC3D
APOBEC3C
NAV2
MTHFD1L
DHDDS
AGO1
NDUFS5
FRG2C
TIMP4
LRRTM4
OBI1
PTMA
ZFHX3
ZNF343
CER1
GOLGA6B
E2F7
ID3
STAC3
RIIAD1
CELF3
RNASE9
FZD8
CYP2S1
IFRD1
HDAC9
RPH3A
OR5AR1
HMGB1
SLA2
SOCS3
CD200
DUSP29
SORBS2
SALL3
PHF5A
ACO2
DDX43
SMCO1
RTBDN
MAST1
GOLGA6A
PF4
PPBP
ALDH1A2
FAM180A
ZNF398
SLC2A14
TSKS
AP2A1
IL34
MTRNR2L8
LRRN1
ZNF532
BRINP2
ZIC4
PMEPA1
SUCO
GATA3
CLDN9
HES5
PANK4
EDDM3B
CDC42EP3
SNRPN
DDX17
ANP32A
GDF11
ARID2
KIFBP
CSGALNACT1
SCGB3A2
MUC3A
PPP1R16B
AJAP1
MED25
FUZ
CANT1
FGF2
NMNAT3
SGMS2
ITGB5
PIP5K1C
LIPK
TDGF1
CHMP7
MTRNR2L1
PQBP1
TIMM17B
VOPP1
DDX3X
FGD3
ADAM28
TRIM24
ESR1
PDZRN4
PNRC1
SNX16
CHFR
PCBP1
FRG2
MUC1
ADGRG7
OLFML3
TKT
LMCD1
MYSM1
SNURF
MAGEB2
ARHGAP42
GADD45G
PAK1
BTG2
PLPP2
TRIML2
TFAP2A
TRAPPC8
RAB4B
MIA
ZNF775
ZCCHC3
VCPKMT
SAMD5
FOXP1
POSTN
TFE3
SDCBP
PRPS1
GNAI2
AKR1D1
NDUFB5
MRPL47
WDR49
C16orf74
ACVR1
TALDO1
GABRB3
ZNF781
ARSL
BEND3
GPSM3
SALL4
MRPL20
MICA
WFDC8
LINGO1
ART3
PLEKHG5
TMEM47
EXOC7
FBP1
MED12
ABCC2
RAB17
FAM81B
CDC14B
PYGM
WNT5B
ONECUT2
GRK6
MMP10
AASS
PDE1B
DNAJC25-GNG10
DNAJC25
MAD2L2
EXOSC9
SMAGP
SYTL2
TNIP1
UTF1
MACROH2A1
TPCN2
GCNT2
IL17RD
ABHD11
PXMP4
PITX2
ACOXL
AHCYL2
AKIRIN2
FAM120B
DLL1
DACH2
ERBB2
PGAP3
C20orf96
CHCHD3
SCAF4
USP7
REV3L
PLPP3
NFYC
TIAM1
PGBD5
NADK
RASA1
ABCB5
FAM24B
H3C15
H3C14
H2AC19
H2AC18
TMEFF1
NBPF9
RGSL1
HLA-A
ZFC3H1
THAP2
WDR74
MOBP
DGLUCY
CLCF1
TNRC18
LOC100129484
EXT1
PDCL
PRAC2
PRAC1
NUAK1
RNF24
ISOC2
LHFPL4
CDK6
SNX19
PAG1
HGS
ARL16
DOK7
FZD2
UNC13B
GJA10
FAM200B
ZNF831
PEAK1
HMG20A
INSM1
PARP1
ZNF600
SHROOM3
ZCCHC12
FBXW11
TES
DOCK5
MOV10
SYN3
KCNJ1
SINHCAF
ACSL6
PRMT2
RIF1
CTSF
SHISA5
ESRP1
HIP1R
CCT2
C1orf127
KLF7
CCDC200
MDN1
PREX2
TNRC6A
TUBB
MDC1
C7orf57
HK2
CACNA2D1
KCNN2
GRID2
UQCRH
LRRC41
GPRC5B
TJP2
SLC39A8
FZD5
TLE1
CAPZB
TEAD4
PRKAG2
NXN
FAM136A
GABRR2
CELF4
PTX3
AK4
NOTCH1
HOXA1
HOXA2
TRPC4AP
FZD10
DET1
KLHL31
ETV1
DPH6
ISL1
ATP6V1G1
STMN1
WASF1
CDC40
CNOT11
ISL2
TMC5
DHX8
GJC1
NXPH2
LNX1
ZNF367
WDR36
SYNPO2
BCL2L11
GPC6
MED4
ANK2
GRIN3A
GLRB
GJA1
ADA2
BIN2
FZD7
AKIRIN1
ZBTB45
DNAJC7
NKIRAS2
LONRF3
GABBR1
CAV1
MGAT4C
HRG
SYK
NUP160
KCNIP4
YAF2
ANKRD40
YEATS2
HOXB1
ASIP
SOX5
PRDM14
SPIC
TRIM13
GCSAM
TRAPPC3
NELFCD
MAP7D1
AGFG2
PPP3CC
UBTD2
HBG2
TNC
GABRQ
SH3BP4
CARHSP1
LRRTM3
RCN1
RTN4
MARCKS
KLF3
MYT1
LIMCH1
UNK
H3-3B
SMARCAD1
PITPNM2
GCG
TGIF1
NEBL
PSIP1
TTYH1
MEX3D
NPAS3
TBC1D17
AKT1S1
TMEM43
CHCHD4
KDM2A
SENP2
PDIA4
OAZ2
SLAMF1
KDM2B
CFAP20
ARMC12
LFNG
GSN
ETV4
COL23A1
NCDN
KIAA0319L
FGD4
IER5L
CYP1A1
USP44
FGFR2
FIGNL2
NRCAM
LIN28B
MTRNR2L2
MSH3
DHFR
TRIM48
KMT2B
MCCC1
CYTH2
FRAT2
MRS2
FBXL19
FBXO40
PER2
TRIM2
TRIP4
PALM2AKAP2
TMCC1
DND1
SLC35A5
TMEM41B
ATG3
AMN1
HOXD13
HOXD12
CCDC169-SOHLH2
CCDC169
IQCH
AAGAB
PLAGL1
CRYGB
SNAPC3
ECE1
JPT1
PDPN
ITPRIP
GXYLT2
SPRY4
SYT2
ST18
RFX4
PRR15
DHX32
SOX14
CEP41
ECT2
DCAF4L1
WBP1L
BFSP1
PCLAF
ZNF436
DDR1
DRAXIN
MTM1
ZNF335
EEF1A1
GDF3
CAPRIN1
PIN4
L1TD1
VWCE
HMOX1
ZSCAN10
WDFY2
FOXD1
SRCIN1
SRSF7
IFT80
GET3
TBC1D16
ARIH1
ITGB3
NDUFV1
CCDC130
MOG
MAST4
STK31
TIAM2
WDHD1
SOCS4
ZNF304
PUF60
SASH1
DENR
MMACHC
DUSP12
NDUFAB1
C8orf58
PYCR2
GTF2I
DST
LYPD6B
UGT1A6
CHN2
ALDH7A1
RGS3
RBFOX2
C10orf95
NDST1
PLEKHG1
AEBP2
PTAR1
ZNF536
TNFSF8
KRT8
SEC22B
CAPN3
ADAR
TOMM40
VANGL2
SLC20A2
PACSIN2
ABL2
LRIG1
ESR2
CAMTA1
EMSY
PGPEP1
ZNF296
GEMIN7
PSME3IP1
SHF
LIN28A
UFD1
TRIB2
CDC45
NECTIN1
RASAL2
KDM3A
HHIP
CHD6
UBAP2
CCN2
FXYD5
HES1
AASDH
ZNF565
AUH
SMAD3
SIX2
CCL26
GLDC
SLC33A1
NPSR1
LMNA
TPST2
MVB12A
TESK2
FAM20A
MYCL
SLC3A2
TCF7L2
SLC23A2
TSPAN14
ZNF649
SLFN12
TMUB2
DPPA4
ZNF195
RPL8
BCL9
ZNF664-RFLNA
ZNF664
CCDC92
PPP2R3A
PRRC2B
RMND1
ARMT1
NTN5
PXDC1
PRODH
LOC102724788
ZNF875
VPS37B
F11R
SMIM14
CDH10
SLC25A36
FOXO6
NEUROG3
TRPM1
LRAT
SOAT1
CTNNA1
SPHK1
LRRTM2
PYGB
FAM153B
PDGFA
ESX1
LRRC47
LIMK2
ABCC10
DISP3
VASH2
MSANTD4
SAPCD2
KLF5
BFAR
KLF6
CNGA1
STOX2
B3GALT5
CFLAR
ZSCAN9
ZBTB18
SLC16A13
MUS81
CFL1
PGK1
MAP6
OSBPL1A
BCAT1
ZNF428
EPB41L1
CRISPLD1
ACSL1
MTHFD1
ZMAT2
SELPLG
YIPF4
ZFP3
CSF2RB
INO80D
TET3
ZNF552
ZNF517
DACT3
CDYL
PNCK
GSAP
APOBEC3G
NIPAL1
GAST
CCDC85A
S100A16
PIK3R3
G3BP1
ETV6
CPT1A
LRGUK
KRTAP3-1
SACM1L
DICER1
ZNF202
CELSR3
TNFRSF6B
DTNA
F11
SORT1
BORCS6
TRMT2A
RANBP1
SYNCRIP
BBC3
DPP3
IFI16
ZNF814
GLI2
PTPRN
TP53
GPC4
OR2T1
CXADR
RFLNA
TACC2
SLCO5A1
OGA
TOX3
SAXO1
POLB
MRPL18
CAAP1
DHRS3
MBOAT2
SDHC
UBQLN4
LAMTOR2
DDX39A
NEPRO
EPHB3
HMGN1
BAHCC1
CTNND2
ANAPC15
PSME2
CD2BP2
KNTC1
ERMN
GALNT8
SLC6A8
SNAP23
ID1
C22orf39
MEIS2
SPTLC2
PREP
UPF1
PIF1
MYEOV
HSPH1
CSRNP2
PPP1R18
NRM
AIRE
LEKR1
ESRRA
CATSPERZ
EMC9
TIAL1
TSPAN5
SH3GL3
LLGL1
DCLK1
EPHA4
SHC3
STRA6
RABGAP1L
GADD45A
SLC25A11
RNF167
ABLIM1
OR6C3
VEZT
FGD6
PLCH1
YLPM1
AFF1
ARID5A
TLE3
RAB30
DPYSL3
CCL2
TBC1D23
ADGRL2
MSL2
IL7R
CNMD
NACAD
ZFYVE1
TUT1
CNR2
SDCCAG8
CEP170
CHD7
KRBA2
TCHP
PTPN12
NWD1
HELLS
TLL2
LRTM1
SPATC1L
RNF43
TLX3
GUCA1A
RAB23
SLC10A2
SYBU
PROM1
FOXN3
ERGIC2
OCSTAMP
CTBP2
RNF213
PIK3C2A
PAFAH2
CTTNBP2NL
PLEKHB1
CCDC33
C1orf198
KLHL24
OSBPL2
JUP
PPME1
C2CD3
SP5
AP2B1
NCOA7
HSBP1L1
COPZ1
KIAA1522
LGR6
VSIG10
SRP68
TMEM114
TAGLN3
ZBTB40
MEF2C
SET
SPATA22
ATG9B
TRDMT1
RARB
ANKRD6
ST6GAL1
CCDC88C
C1R
ASH2L
LYPLAL1
RPL27
ZFAND3
RAD54B
RRAGA
DLST
IFIT3
SFPQ
RAX
THEM4
STK32C
LRRC27
ARSG
SLC25A16
RGPD1
EGR3
ERVH48-1
SPATA12
LYPD1
H4C14
CACNA1S
CCDC167
PEA15
PDE4D
DTX2
TCAF1
PWWP2A
PRND
PES1
ITGB1
RBM20
PCDHB8
TCF4
SCOC
ITPK1
NEDD9
NCBP2AS2
NCBP2
ETFB
PCYT1B
MBNL3
CDC25A
ZNF627
C1QTNF7
GOLGB1
RAPGEF5
PHLDB2
GLIPR2
FAM126A
NKX1-2
CEP63
ANAPC13
SEC14L5
RESF1
CMTM4
CUEDC1
NR6A1
ROR1
TMEM107
MATR3
ZDHHC5
FAT1
PRKCA
GABPB2
RBM39
ZSWIM4
NATD1
ETV5
FGF4
RNF19A
TRIM22
MTUS1
TRPM3
KRT6B
TRIM5
GALNT3
PCDHB16
MDK
OAT
ARHGAP19
ZNF318
SPAG9
EPB41L4B
UHRF1BP1L
RBBP9
ABCB8
ZBTB8OS
RBBP4
ENO1
ADRM1
ACCS
RGPD2
ZFP64
WDR44
IGBP1
TMX2
MED19
MANSC1
HEXIM2
FAM181A
CNP
ZFAND6
ZBTB2
RASSF8
CDC42EP4
HEY2
DLX6
NRXN1
TIA1
ZFP36L1
ARSD
THRB
JAG1
CNKSR3
MOSPD3
TBL1XR1
ARF4
MIDEAS
PIMREG
TCN2
KIAA0895L
FGF19
SKIDA1
PHC2
SULT6B1
HNRNPDL
EP300
ENOPH1
FSBP
TSNAXIP1
RANBP10