ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6101128 | hESC H9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◣ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

SMARCA2
DPPA5
TRIP4
PCLAF
FBXW11
GDF11
REST
MED12
JPT1
TMPRSS11E
ARHGEF38
SPIC
ZNF483
RIF1
SOX6
MTF2
SEC22B
UGT1A6
NRG1
ITGB3
MYSM1
SLC35A5
ATG3
NCDN
KIAA0319L
FAM222B
RPL8
ZNF517
CD99L2
TIAM2
OBI1
ZNF343
NDUFV1
TUBB4A
ANKRD1
TMEM41B
TNFSF8
UBAP2
DDX43
ZFP3
MRS2
AIRE
CMTM4
CRYGB
CELF4
KLF5
RMND5B
DENR
MRPL20
SPTLC2
MSL2
ATG9B
ABCB8
CFLAR
PRICKLE1
FAM200B
PUF60
VANGL2
TRIM2
UTF1
NLRP7
VSIG10
MRPL18
PNLDC1
ZBTB18
BFAR
SAMHD1
MFSD4B
ESR2
ZNF875
ZNF398
PRDM14
FAM20A
PTAR1
SLC25A16
FLAD1
CCDC130
OR6C3
SHCBP1L
DUSP12
NADK
APOBEC3F
GSN
MROH7
ZSWIM3
ACOT8
ARRDC2
PROM1
PRODH
LOC102724788
ZNF335
ZNF552
GALNT8
NES
WDHD1
SOCS4
ZCCHC4
FUBP1
DNAJB4
PMEPA1
TALDO1
ABCC10
WDR74
DUX4
AASS
NFKB2
ATAD3B
TPCN2
PALM2AKAP2
KIFBP
BTG2
PCLO
UPP1
SOX5
SLC2A11
SLA2
PSORS1C2
GINS3
SRSF12
C10orf95
DERA
C19orf25
SLC16A10
MTRNR2L1
GNAI2
SNAPC3
PTPRN
PRKAA1
NDUFAB1
TBL1XR1
GLDC
MTHFD1L
FOXP1
RNASE10
ZNF696
ZNF565
TET3
UNC13B
ZNF649
ATMIN
CCDC200
NCBP2AS2
NCBP2
SLTM
STMN1
OTX2
SNRPN
MT1E
MOG
TDGF1
RMND1
ARMT1
BIN2
ZNF318
FEZ2
DET1
NCOA7
HNRNPL
MBOAT2
GUCA1A
SDHC
AGO1
SFRP2
IER5L
ZNF469
PDCD7
DND1
ITGB5
PRRC2B
MRGPRX3
PDCL
SLC23A2
DLX6
ID3
FGD4
FBXO40
LRRTM4
KRBA2
AGL
SNX19
TMC5
LRRC74A
NEPRO
SCGB1D1
FAM227A
CBY1
RASA1
DEFB124
APOBEC3G
MGLL
OAT
NPSR1
MMACHC
MRPS25
TMEM229B
DEFB108B
LARP1
PNCK
ARHGAP19
ETS1
GJA1
MPI
SNX16
ZCCHC3
CATIP
RASSF8
GABRQ
ABL2
RPUSD3
RTN4
RPGRIP1L
FTO
SGMS2
KRT82
ZNF385B
SNAP23
TAF13
ANKDD1B
ZFP64
HOXD13
HOXD12
SLC35F6
BCL9L
MAPRE3
LIPK
IQCF2
RASGRF2
CCL2
SOAT1
NOTCH1
YIPF4
DPPA2
VPS37C
ZNF729
CNR2
FOXN3
KHDC1L
LINGO1
SULT1B1
GRAP2
DEFB107B
DEFB107A
IFRD1
S100A16
GJA10
GLIPR2
DNMBP
SYN3
SLAMF1
GP5
DNTT
LDAH
SUCO
CCDC85A
WDFY2
RIMKLB
ZNF90
PHC1
AKIRIN2
C1R
C2
SCHIP1
PRDX3
LDLRAD1
DDX39A
PTPN12
SPRY2
HLA-F
DISP3
ACYP2
PSME4
RTP3
PMS2
AIMP2
SLC3A2
GIMAP5
SMAGP
HCAR2
OR5AR1
FRAT2
CTNNA3
SOX2
TRIML2
F11R
SET
HYAL1
THOC2
ZNF566
TRIM24
FGFR3
SLC35G4
ZMIZ2
MARCHF8
SPATA45
TRAPPC8
MVB12A
PRPS1
PNISR
HYOU1
SLC35G5
AK4
MS4A12
DAGLB
OAZ3
ZNF260
TMEM202
TFAP2C
NTAQ1
PRKAG2
ERVH48-1
C5orf60
PDE4DIP
LEFTY2
ZMAT2
AP2B1
ZC3H12B
PSRC1
SSH1
ALDH1A2
CRYZL2P-SEC16B
CSPP1
XBP1
ZNF460
SLC7A7
CNGA1
NIPAL1
SH2D4B
CYP1A1
ADCK1
IGFALS
FZD8
SHISA5
ZNF532
ZIC4
GOLGA6D
ASIP
TSSK4
SESTD1
PUS1
FAM193B
BCOR
CLDN9
ADA2
ASH2L
EVA1B
FASTKD1
SERF2
ELL3
DCAF4L1
CAPN3
COL26A1
L1TD1
STMN2
CLEC4A
PIN4
PCDHGB2
PCDHGA5
DTD1
OR8B3
ATG5
SYT2
IFITM3
IFITM1
VAMP1
CYTH2
MDK
NUP205
NNT
GAST
LHFPL5
CLPS
GGTLC3
TUBB
MDC1
KRT8
LIN28A
CLEC9A
WDR25
WARS1
SAPCD2
UAP1L1
PINK1
ELP6
NECTIN4
CDX2
UFD1
CDC45
ZNF37A
VIT
CKAP5
METTL16
SHPK
CTNS
SEPHS2
SALL3
SLFN12
PRAMEF17
OR6J1
RAPH1
EPB41L4B
CCR8
ZNF600
CAAP1
STX18
ARHGAP42
TAX1BP1
CCDC169-SOHLH2
CCDC169
HACD2
FBXL19
EXT1
RAB40AL
SUCLA2
RPL11
ORC2
GAD2
PARP1
FGF4
SLCO4C1
YWHAE
GCNT2
YAF2
EIF4EBP2
SLC35G3
FAM169A
CENPS-CORT
CENPS
TULP4
ZSCAN2
VMO1
GLTPD2
SLC38A9
KCNQ5
GDF3
FERMT1
UGT1A4
MRPS36
GTF2A1L
PEA15
GALNT3
TTC23L
RNF212B
TRAF3
CHMP7
MS4A1
DUSP6
LZTS1
INKA2
PPP1R8
DDX20
SEC63
ETV4
AARS2
HDAC9
CHI3L2
RMDN2
ZNF844
POM121C
SPDYE5
TCF7L1
C8orf58
NFE2L3
BEND3
FZD5
PYGB
MX2
HOXB2
CSNK1D
NAV2
SRSF7
VN1R4
MSLN
IL34
EMSY
FOXO6
GGTLC2
ZNF296
GEMIN7
AP1S1
NEB
ZNF341
TMEM160
PSME3IP1
SRRM4
TMX2
MED19
OR6S1
ATG7
SLC25A18
SPAG5
NDUFAF3
DALRD3
CNOT11
COLEC11
HLA-DRB5
WDR11
DHRS3
TTC9C
HNRNPUL2
RBBP9
PRKAR1A
SMARCB1
PRR13
LGALS4
GADD45G
MACROH2A1
TRIM22
TRIM5
GNA12
ZNF432
SDCBP
CD101
OR1E3
DES
MTRNR2L2
MSH3
DHFR
CEP41
INSM1
PLPP3
GAS6
FGD3
SLC20A2
SH3PXD2B
SMCO1
SRCIN1
LYPD6B
F11
BLOC1S4
ZNF584
IFI16
NFYC
C7orf57
AMOTL2
ZNF777
NANOG
TNFAIP8L1
GOLGA6A
ZSCAN10
PHF19
PPP1R3B
PTMA
CAPRIN1
SERPINB6
SENP2
MYRFL
LRRC47
SELENOT
RNF24
RUNX1T1
ADAR
LEKR1
H1-7
MX1
DDX3X
TSKS
AP2A1
DCLK1
TNP1
CEP85L
TMEM109
ZFP42
SELENOV
GPRC5B
DGLUCY
CACNA2D1
BTG1
BCKDK
FAM214B
SPDYE7P
GXYLT1
POM121
EML2
FBXO9
CILK1
CHN1
CA13
SLC35E4
CLYBL
FANK1
MED15
ZNF587
TRIM60
OAS1
ZNF664-RFLNA
ZNF664
CCDC92
DUSP16
E4F1
PGP
CPB2
CITED4
PCBP1
FXYD5
AADACL3
ACSBG2
TEX49
PNKD
CLEC12A
CCDC83
FLVCR2
AAMP
WASF1
CDC40
MRPS23
NAV1
CLDN20
NCR1
TSTD2
NCBP1
HLA-DRB1
ACOT6
CACHD1
OGT
IGSF1
MAGT1
COX7B
REX1BD
AASDH
HEY2
RFC4
ZC3H4
SLC6A12
CDYL
BBC3
TMEM150C
C8G
LCN12
MCL1
FBXW5
AP2M1
PRSS41
LACTBL1
SPATA4
ATP5F1E
CANT1
RTN2
PPM1N
BRMS1L
IQCF1
PLEKHA3
FKBP7
GBP1
GPR1
CCDC60
S100A13
ARMCX5-GPRASP2
ARMCX5
PSMD9
HPD
OLIG3
PGAP6
CCR3
IFIT3
MPPE1
LRTM2
ZNF33B
SLC2A14
NACAD
IGF1
ARHGAP18
RPL3L
C22orf39
H3C13
H2BC18
RIIAD1
CELF3
TGIF2-RAB5IF
TGIF2
EFHC1
PRND
ZNF281
ZNF416
ZIK1
LINGO4
PPM1A
PXDC1
FILIP1L
CHD1L
NBPF9
ATP9B
PRMT2
ZNF614
HHIPL1
CCDC85C
SCGB3A2
RCN1
SNURF
SCAF4
AUH
TP53
LUC7L2
IQGAP2
FMC1-LUC7L2
FMC1
CCDC69
S100P
CSRNP2
LMAN2L
FOXR1
IFT80
ZNF781
ZNF710
CORO1C
CEP78
ZNF329
ST18
ZNF814
CDK17
FLNB
MYBPC1
VPS37B
SOX14
PPP2R3A
CLEC2L
PADI6
UBN2
NUP50
ALAD
OR14I1
ALOX5
NDUFB5
MRPL47
RESF1
OR10AD1
SLC2A3
H2BC15
H2AC15
TM4SF1
PRR23D2
PRR23D1
NMRK2
H3C15
H3C14
H2AC19
H2AC18
TACC2
HEXIM1
ZNF200
PRLHR
ATP6V1G1
CCNG2
DUSP8
SERINC5
TLR1
OLFML3
TRIM64B
NUBP1
ARHGEF11
VENTX
GXYLT2
HSBP1L1
NARF
CFAP410
VAMP8
OR7D2
APELA
SLAIN2
CYBC1
POGLUT2
PDHB
FNBP1L
GNAL
HMGCL
WWTR1
GPD2
CNNM3
POLQ
LYPLA1
RPL23
DCUN1D1
LNX1
THEM4
NR6A1
LCA5
TFE3
MANSC1
TBC1D1
NRBF2
TBC1D5
ANXA3
APOBEC3D
APOBEC3C
ZNF436
DDR1
ANAPC15
CDC42EP4
KAT8
ZNF630
GAB2
DUSP13
EFR3B
MACROD1
TJP3
KLF7
GSAP
UPF1
LGALS12
CAMKV
NIT2
YBEY
MCM3AP
INPP5F
UBXN11
CD52
IER3
FLOT1
PRAP1
SHROOM3
PLD3
C19orf47
PLBD1
TUBA3E
GRK6
SH3BP4
LPP
SGMS1
RPS10-NUDT3
RPS10
DSCC1
TMEM50A
LPCAT3
LAIR1
MS4A13
PLAGL1
TGIF1
FSCN1
RBM47
SNX30
NCLN
BCAM
GGTLC1
DLG3
C17orf98
FBP1
EPB41L1
PHLDB2
PRDM1
FABP1
NRARP
PEAK1
HMG20A
LRGUK
SMARCAD1
RAD54B
FSBP
RIOX1
UFSP2
C4orf47
SLC12A9
EPHB4
SORBS2
NUFIP2
GFRA4
RUFY1
ETV1
ACBD7
MRPS7
GGA3
GREM2
SLC7A5
ACSL6
ZNF524
FIZ1
SRPK2
C5orf34
PLSCR4
SH2D4A
TMCC1
DNAJC7
NKIRAS2
APOL1
MYOZ2
PPA1
ATP6AP2
PLEKHM2
F2
HES3
ICMT
LRRTM3
PFKFB3
SLC19A3
TMEM114
LEMD2
TBCD
CD248
EFNA1
DNMT3L
KCNN2
LMNA
MUS81
CFL1
UBQLN4
LAMTOR2
MEX3A
ZNF263
PCDHA10
SH2D5
SLC12A3
ZNF775
RNASE9
CHD7
TAGLN3
NASP
IHH
ZNF140
SYK
SACS
LRRN1
MAD2L2
DRAXIN
EEA1
IL4R
SLC6A15
CHFR
ANK3
POLR1F
SPART
FOXE1
VPS35
SOX13
ADAM33
DPH6
EXOSC9
CD200
LGR6
CLEC7A
ANP32B
TXLNG
EID3
GPR176
FURIN
FRG2C
ESRP1
DYRK1B
PPARG
KLHL12
FMNL2
SYNJ2
PRR15
SAXO1
HSPH1
TMEM107
CD300LB
RBM41
CLIC4
RNASEH1
LOC112577592
HESX1
CTBP2
FOXB1
TMEM167B
STOM
LONP1
CATSPERD
RIN2
SRR
SMG6
SULT6B1
FRAT1
PRPF8
MRPL48
CNTRL
YPEL2
C5
TIMM50
KMT2B
WDR44
MAD2L1BP
GTPBP2
MRTFA
OVOL2
FIG4
AK9
CCDC90B
ARHGEF18
ATP6V1B1
TMEM89
KLF3
DUSP29
BRINP1
GIGYF1
OLAH
GTF3C4
DDX31
EVI5
HES2
ESPN
PPP2R2A
TMEM43
CHCHD4
PLEKHG5
GPR146
NUP62
IL4I1
ATF5
ST3GAL4
FARSB
TMEM102
FGF11