ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6101129 | hESC H9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◣ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

SMARCA2
MAMDC2
DPPA5
ZNF483
GDF11
TMPRSS11E
SOX6
ZNF343
TRIP4
PCLAF
REST
SPIC
UGT1A6
RIF1
MED12
JPT1
ARHGEF38
OBI1
NRG1
ESR2
FBXW11
FAM222B
DND1
CELF4
CD99L2
NCDN
KIAA0319L
FAM200B
MTF2
KLF5
UBAP2
SOAT1
SLC35A5
ATG3
CMTM4
MSL2
ITGB3
ZSWIM3
ACOT8
RMND5B
NADK
TNFSF8
MFSD4B
ZBTB18
SPTLC2
PUF60
TIAM2
DDX43
MYSM1
MRPL18
PNLDC1
BIN2
TUBB4A
SLA2
MRPL20
RPL8
ZNF517
CFLAR
NDUFV1
OTX2
PRICKLE1
PROM1
AIRE
APOBEC3F
SAMHD1
ANKRD1
SLC23A2
BTG2
ETS1
AGO1
TRIM2
UTF1
NES
C10orf95
EVA1B
SPATA45
OAT
TALDO1
NDUFAB1
PCLO
SEC22B
CCDC130
DUSP12
VSIG10
SLC16A10
ZNF696
ABCC10
IER5L
ZFP3
MRS2
PALM2AKAP2
MBOAT2
PRODH
LOC102724788
LDAH
CNR2
FLAD1
ABL2
SCHIP1
MT1E
WDHD1
SOCS4
GSN
MBNL2
PRDM14
ZNF552
FAM20A
SNAPC3
ATG9B
ABCB8
SRSF12
ZNF398
APOBEC3G
GLDC
SCGB1D1
SNX19
BFAR
CRYGB
ATAD3B
MTHFD1L
HOXD13
HOXD12
ARRDC2
RASGRF2
FGD4
YIPF4
PMEPA1
LRRTM4
UPP1
PARP1
GABRQ
SNRPN
NLRP7
UNC13B
DET1
GINS3
TFAP2C
SOX5
MMACHC
TDGF1
PDCL
DDX39A
ZNF318
MOG
PTAR1
CCDC169-SOHLH2
CCDC169
PTPRN
ZNF875
PDCD7
TMC5
FRAT2
RCN1
LARP1
SH2D4B
TRAPPC8
ZFP64
SHCBP1L
ZCCHC4
ZNF729
SFRP2
RASA1
ZNF565
NEPRO
CSAD
ZNF740
RMND1
ARMT1
FAM227A
CBY1
PTPN12
DERA
BCOR
AGL
SLC35F6
KRBA2
ZNF469
HLA-F
CCDC200
SDHC
GNAI2
RASSF8
ARHGAP19
PRKAA1
ID3
SLC2A11
TET3
TMEM229B
KRT82
AP2B1
CACNA2D1
ITGB5
PHC1
GAST
ATG5
PRRC2B
GALNT8
OR6C3
SLCO4C1
SOX2
LHFPL5
CLPS
NCBP2AS2
NCBP2
ZSCAN10
TPCN2
SESTD1
ZNF532
MRGPRX3
CATIP
DEFB124
DENR
PMS2
AIMP2
IFRD1
ASH2L
SYN3
DTD1
ZNF335
MGLL
RNASE10
SLC25A16
NPSR1
CNGA1
NIPAL1
SLC35G4
ZNF460
NFKB2
CNOT11
WDR25
WARS1
PRPS1
SLC7A7
OR1E3
TMEM41B
KIFBP
DLX6
TRIM22
TRIM5
NTAQ1
PEAK1
HMG20A
PITPNM2
SNX16
BRDT
RTP3
HCAR2
C1R
FUBP1
DNAJB4
SLTM
FAM107A
SAPCD2
UAP1L1
LRTM2
AASS
VANGL2
TP53
TBL1XR1
PSORS1C2
PYGB
FZD8
LRRC74A
LIPK
GJA10
MRPS25
MROH7
TRIML2
CCDC85A
ZNF385B
EXT1
SLC3A2
OR6S1
FOXP1
VIT
FBXO40
DCAF4L1
STMN2
SLC30A9
PNCK
SLC6A8
C19orf25
GIMAP5
OR6J1
ZNF90
MVB12A
AKIRIN2
SNAP23
FGFR3
DEFB107B
DEFB107A
RPUSD3
TMEM202
SLC35G5
PINK1
IL34
ALDH1A2
MYRFL
WDR74
ZCCHC3
YAF2
GUCA1A
ZNF649
RAB3GAP1
GRAP2
LEFTY2
S100A16
ATMIN
IQCF2
SRRM4
DISP3
RPL11
KRT8
F11
GJA1
SPAG5
RNF212B
PRDX3
GLIPR2
SLC38A9
DUSP16
NOTCH1
SALL3
ADAR
LRRC47
SPRY2
SHISA5
ST18
RIIAD1
CELF3
CEP85L
THOC2
IHH
COL26A1
CLDN9
L1TD1
TBC1D1
RFC4
RIMKLB
FGF4
ELP6
FXYD5
ZMAT2
SMAGP
TAF13
DNMBP
CHMP7
GP5
KHDC1L
ADA2
SLC2A14
PCDHGB2
PCDHGA5
LINGO1
MACROH2A1
AHCYL2
DAGLB
PRKAR1A
FEZ2
ZNF584
OR5AR1
SET
GOLGA6D
PIN4
AK4
HDAC9
GAD2
LGR6
FAM193B
C8orf58
STX18
GDF3
DUSP6
HLA-DRB5
LCA5
TRIM24
FOXN3
ZC3H12B
SPATA4
RTN4
CDYL
ACOT6
ZFP42
DNTT
TULP4
MS4A12
MPI
E4F1
PGP
NCOA7
FZD5
CYP1A1
FASTKD1
APOBEC3D
APOBEC3C
CAAP1
FAM169A
SDCBP
PRAMEF10
NEB
PPP1R3B
SLC35G3
MED15
STMN1
SOX4
ATP9B
IGFALS
ZMIZ2
HOXB2
CSPP1
BCL9L
CTNNA3
CCDC60
ZNF281
CCR8
DUSP29
LYPD6B
DUX4
ARHGAP42
TACC2
INSM1
PSRC1
PGBD2
PRR15
NFE2L3
CAPN3
SLFN12
IFT80
C2
GTF2A1L
ADCK1
SYT2
CCNT1
SULT1B1
MARCHF8
ACYP2
PSME4
MAPRE3
ACBD7
DPPA2
CACHD1
RBBP9
AMOTL2
BCKDK
MX2
NR6A1
RPGRIP1L
FTO
GNAL
C22orf39
CCL2
ETV4
DPH6
XBP1
SNURF
ETV1
FGFR2
PRKAG2
SEC63
LDLRAD1
BEND3
PXDC1
SERPINB6
LPCAT4
CEP41
TRIM13
DUSP8
DEFB108B
ZNF600
CHI3L2
PRR13
VN1R4
ATP6V1G1
PRSS41
SRPK2
EML2
ZNF664-RFLNA
ZNF664
CCDC92
SSH1
ZSCAN2
GAS6
ATP6AP2
FLVCR2
SLC35E4
HES2
ESPN
DDX3X
TSKS
AP2A1
TMEM150C
SELENOV
PRAMEF17
TRIM60
MAD2L2
DRAXIN
FERMT1
OR8B3
SGMS2
SRCIN1
EMSY
COX8C
FZR1
AUH
RMDN2
TEX49
SEPHS2
CRYZL2P-SEC16B
PUS1
CLPP
CLEC9A
ZNF566
FOXE1
TRAF3
ZNF624
GPR1
GSAP
METTL16
ANKDD1B
H3C13
H2BC18
HYOU1
TGIF2-RAB5IF
TGIF2
NECTIN4
AASDH
CLEC2L
RUNX1T1
CA13
YWHAE
HSBP1L1
OMP
BLOC1S4
PNISR
TAGLN3
FBP1
IFITM3
IFITM1
LRIG1
TMX2
MED19
EPB41L1
SLC25A18
HLA-DRB1
CDX2
HYAL1
NANOG
CKAP5
C5orf34
TTC5
NACAD
PDE4DIP
SUCO
ZNF432
CD101
TMEM114
SPDYE7P
POM121
MTRNR2L1
THEM4
SLC35A2
RAPH1
VPS37C
ORC2
SCAPER
CD200
CACNB2
NDUFAF3
DALRD3
ZNF436
WDFY2
PCBP1
OLAH
CREBL2
BIRC6
POGLUT2
PPP2R3A
RESF1
ZNF296
GEMIN7
KRTAP21-3
ESX1
TCF7L1
ZNF814
NKX1-2
OAZ3
KIF11
CHD1L
HEY2
ACSBG2
SH3PXD2B
SENP2
SHPK
CTNS
VENTX
USP44
DCLK1
HNRNPL
ZNF260
C5orf60
TMEM263
SAXO1
TAX1BP1
LRGUK
CCDC69
IFI16
FANK1
ASIP
RAB40AL
GXYLT2
SLAMF1
NUP205
TRIM64B
GCSAML
RUFY1
GXYLT1
RBAK-RBAKDN
RBAK
EXOSC9
CCS
CCDC87
CAPRIN1
PEA15
EEPD1
C8G
LCN12
FBXW5
DGLUCY
MRPS7
GGA3
SELENOT
ZNF429
ACOXL
HEXIM1
EPB41L4B
CFAP410
TRPC4AP
PDE4C
ZNF781
UHRF1BP1
LGALS4
SOCS3
PPARG
SCGB3A2
SLC2A3
HEG1
OVOL2
SPDYE21
IGSF1
FARSB
KDM2B
LMAN2L
HESX1
FBXL19
OLFML3
TBC1D23
SERINC5
NAV2
SLC20A2
RBM41
PSME3IP1
CD300LB
SERF2
C8orf76
ELL3
TRIT1
OR7D2
REX1BD
CLDN20
CSNK1D
TUBB
MDC1
CHCHD3
RUFY3
EEA1
ZNF878
MRPS36
UBQLN1
CABP1
H3C15
H3C14
H2AC19
H2AC18
ERVH48-1
ZNF37A
CDH10
ATP5F1E
AARS2
HES3
ICMT
DLST
CENPS-CORT
CENPS
LIN28A
REXO4
ADAMTS13
SLC6A12
PLAGL1
VAMP1
THRA
GADD45G
OR10AD1
RPL32
CAMKV
SMARCB1
PLAC8
GGTLC2
ERBB3
NCR1
SORBS1
GNA12
XPO5
POLH
TMEM160
TSSK4
NNT
CCDC83
AADACL3
ZC3H4
CLIC4
MRPS5
GEMIN2
TLR1
GPRC5B
TRIM38
ECE1
PDHB
SACS
PRMT2
CDK17
ETNK2
ELF2
NRBF2
NFYC
MRPS23
IQGAP2
NPAS3
ATG7
RAP1A
GGTLC3
TGIF1
CLEC4A
ZNF777
ZIC4
LRIG2
CALD1
IQCF1
NF2
IGF1
CPSF4L
GBP1
LPCAT3
OR2G2
SRSF7
NECTIN1
VMO1
GLTPD2
SUPT6H
SDF2
GRK6
TMEM68
TGS1
POM121C
SPDYE5
ECT2
TSKU
SUCLA2
MTA2
HACD2
ANXA3
ESRP1
GCNT2
VSNL1
CNMD
NARF
CLEC12A
CYBC1
PAQR3
CPB2
SYK
IL4R
EEF2
SOX14
PRAC2
PRAC1
GAB2
PCDHA10
LLPH
ZNF608
PGAP6
CCDC167
MPPE1
UBE4B
PRND
LHB
SH3BP4
CDC25A
FOXB1
NIT2
MIER2
F11R
CLEC7A
PLEKHA3
FKBP7
RAB7A
LZTS1
PLPP3
PHLDB2
YBEY
MCM3AP
FOXR1
LACTBL1
BTG1
TNFAIP8L1
H1-7
FIG4
AK9
POF1B
KCNT2
ANK3
ALAD
PRSS47
DDR1
MX1
PRDM1
WNT16
HSP90AA1
PLSCR4
WDR20
CTSF
MACROD1
C14orf180
FRG2C
CHFR
NCALD
LONP1
CATSPERD
TBCD
GPD2
ZNF114
SOX13
HSPH1
INPP5F
FUS
SOHLH2
S100A13
SLC41A3
S100A1
EIF4EBP2
STK38
EFR3B
MS4A1
PCSK1
TSTD2
NCBP1
LEMD2
MSLN
SLC12A3
ONECUT2
LRRN1
NATD1
MYLPF
ZNF48
PPA1
MAP6
PRPF8
RNASEH1
C17orf98
GOLGA6C
MRPL48
CYTH2
WDR36
TMEM50A
POU5F1
SIRT2
NFKBIB
SH2D5
WDR44
PPP1R8
COLEC11
MYOCOS
TMEM167B
DNAJC28
GCGR
TJP2
KIAA0895L
JAM3
KLHL12
THOC5
CYB561
RAD54B
LYPD1
FSBP
RPS10-NUDT3
RPS10
GPR146
SRPRB
ZNF33B
CEP78
SNX30
PTHLH
GOLGA6B
NTN5
LINGO4
TMEM107
RORC
SPART
BCL2L1
GALNT3
CDC42EP4
IGSF9
GFRA4
MAGEB17
TTC23L
GLS2
SLC7A5
LAMC1
UBN2
RNASE9
DHRS3
SVOPL
NBPF9
LAIR1
MUC3A
GABRR2
EID3
H3-2
PPP2R5A
VPS35
TMCC1
TDRP
ZNF701
SCAF4
PRLHR
PALB2
DCTN5
ATF6
TRAP1
LGALS12
UACA
RAB14
SPINT2
SLC39A8
TMEM109
AP1S1
TM4SF1
PRR23D2
PRR23D1
CLYBL
LYPLA1
PNKD
CNTRL
C5
DLAT
AAMP
MRPL52
ABCF3
GREM2
DLG3
PFKFB3
KBTBD6
DNMT3L
FAM122C
DES
CHMP5
BAG1
PDGFA
GUCA1B
ZFYVE1
PPARGC1B
SLC36A1
ARSL
MBNL3
LPP
CANT1
PADI6
TUBA3E
TIMM50
SRGAP1
H2BC15
H2AC15
DUSP13
FOLR3
BRMS1L
ZNF329
RFT1
ZNF662
S100P
GTF3C2
SLC6A15
ATP12A
APELA
ZNF614
KLF7
RALGDS
MRPS15
PIGK
PLEKHM2
ZNF888
SPANXB1