ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5771666 | N2102Ep
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◣ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

SMARCA2
ZNF483
OTX2
LRRN1
BTG2
MTHFD1L
TMPRSS11E
ZSCAN2
CD99L2
SOX6
NRG1
ECE1
REST
SFRP2
SNRPN
SNURF
SPATA45
ID3
CACHD1
CRYGB
LMCD1
MRPL20
TCF7L1
MOBP
IFT80
EDDM3B
DCAF4L1
OR5AR1
SHCBP1L
SLA2
CDX2
RMND5B
FGF1
PHC1
LIN28B
PSIP1
DNMT3B
DND1
DPPA5
METTL11B
ZNF398
TRAPPC8
APOBEC3F
NTRK2
WFDC8
ZNF343
ZSWIM3
ACOT8
CELF4
ARHGEF38
ZNF608
PYGB
SAMHD1
SLTM
TMEM43
CHCHD4
TIMP4
MED12
PRICKLE1
GIMAP5
FLAD1
TRIM2
ANKRD1
HESX1
LHFPL4
SEC14L5
FBXW11
FGD4
SLC35A5
ATG3
LEFTY2
FBP1
VENTX
DOK7
LONRF3
IL34
NES
BCOR
RCN1
MTRNR2L8
ETV1
GDF3
CSF2RB
GAD2
FZR1
GDF11
PUF60
RPH3A
YIPF4
MFSD4B
TET3
DIDO1
FGFR2
PEAK1
HMG20A
FAM222B
HBG2
AK4
TDGF1
HOXD13
HOXD12
PARP1
JPT1
SCAF4
EXT1
AMN1
CAPN3
NACAD
NCDN
KIAA0319L
SMPDL3B
NDUFAB1
DUSP6
RASGRF2
FZD2
NPSR1
SHISA5
SLC46A1
ABCB5
NEPRO
PSMG3
TRIM16L
RAX
REV3L
SNX19
ACOXL
UHRF1BP1L
KLF17
VCAN
SACS
L1TD1
FIGNL2
TRPM1
PSMD9
HPD
ANP32A
ZFHX3
SPIC
C10orf95
INO80D
PLEKHA5
TMC5
NDUFV1
ISOC2
PAK1
PREX2
FRAT2
UTF1
GLDC
CAAP1
IGBP1
RAB40AL
MAD2L2
DRAXIN
PNRC1
RESF1
WDHD1
SOCS4
ZNF565
PF4
PPBP
APOBEC3G
PPP1R16B
LYPD6B
BEND3
C22orf39
RAD18
WDR44
NFE2L3
FAM20A
KRT6B
SYT2
SLC23A2
ZNF875
PCDHGC5
PCDHGC4
POU5F1
PTAR1
PITPNM2
ITGB5
CLDN9
GOLGA6D
SOX14
SYN3
TCHP
KCNJ1
TRIML2
H3C15
H3C14
H2AC19
H2AC18
GABBR1
TRIT1
NATD1
ZNF552
AGO1
GOLGA6C
ZNF781
TRIM24
CDC14B
TBC1D16
ZFP3
AASS
RMND1
ARMT1
PIPOX
FXYD5
NAV2
GYG1
MYSM1
GABRB3
DHX32
TALDO1
NECTIN1
METTL7A
GXYLT2
LEKR1
PDCL
SP7
GABRQ
GPRC5B
DET1
PRODH
LOC102724788
CNGA1
NIPAL1
GSN
NRG2
FZD8
SNX16
GJA1
KRTAP3-1
ITGB3
ZNF296
GEMIN7
CFAP410
CER1
ZNF436
MAP6
GTF2I
MAGEB2
FAM180A
KRBA2
PPP2R3A
RGSL1
TRPC4AP
ASH2L
CDYL
MRS2
PCBP1
SRCIN1
PPP1R18
NRM
ZNF600
PALM2AKAP2
SENP2
SALL4
ACCS
REXO4
ADAMTS13
SLC38A9
ZNF438
BIRC6
MTM1
GOLGA6A
CHFR
RNASE9
MDN1
ARSL
ESRP1
RHBDD2
ELOVL6
SOX2
DDX43
RASA1
ANKRD40
PCDHB8
PCDHB16
MSX2
CEP135
OLFML3
MBOAT2
ALDH1A2
LRAT
SLAMF1
PDGFA
SELPLG
KIAA1522
USP44
PRRC2B
SMIM14
RNF186
NADK
CNR2
SMAGP
SAMD5
YAF2
B3GALT5
NEB
SEC22B
MAD1L1
KCNIP4
HELLS
MUC1
TNRC6A
DPPA4
MEIS2
FGD3
TIAM1
TRIP4
PCLAF
BCAT1
ARHGAP36
GSPT2
RIF1
DNMBP
PGPEP1
CMAS
DNAJB1
AGL
IQCF2
SOCS3
CCL2
CCDC33
CCL26
PRDM14
MYF5
NDST1
FGF6
GPR179
ESX1
ANK2
AIRE
DCLK1
OBI1
LINGO1
CYP2S1
DDX39A
USP7
DNAJC7
NKIRAS2
NFKB2
ZNF200
SOAT1
FGF4
CCDC169-SOHLH2
CCDC169
LYPD1
KRTAP5-9
DENR
FAM200B
HHIP
CSGALNACT1
TBC1D23
COPZ1
CDC42EP4
MBNL3
UGT1A6
UNC13B
PCDHB13
ABL2
TNFSF8
TPCN2
STX16
RAD54L2
UPF1
SESTD1
OAT
PLAGL1
ETV4
MOG
PTPRN
GPC4
TMEM167B
CSF3
TRIB2
FBXO40
SYNPO2
LOC102723623
GOLGA6L22
GOLGA6L1
CDH26
HSBP1L1
FHL1
ZNF335
MTF2
KRT8
GSTT2B
SLN
HDAC9
GPR149
UBAP2
KAT8
PRR14L
IFIT3
ERVH48-1
IL22RA2
VOPP1
AEBP2
MRPS25
PCGF6
ZNF664-RFLNA
ZNF664
CCDC92
JARID2
OCSTAMP
TMEM47
PCDH1
MCCC1
DUSP12
RIMBP2
ERAS
GCSAM
CCNT1
LBP
AP2B1
GLIPR2
ZNF814
OR6C3
PCDHB5
PBDC1
LRRTM4
DRD1
PXDC1
ZNF318
MACROH2A1
PCDHGB2
PCDHGA5
GIGYF1
ACSBG2
MMACHC
GOLGA6B
SFT2D3
CCDC130
POSTN
LIN28A
KCNN2
PACSIN2
ZDHHC1
ZNF532
FZD5
MIDEAS
SVOPL
PDE1B
SCGB3A2
GRM4
SERINC3
TRIM54
WBP1L
SLFN12
LRGUK
DHRS3
SPRY2
AQP2
ZYG11A
SPRY4
MVB12A
LRRC47
ABCC2
PGAP6
WDR49
BFAR
RIPOR3
SGMS2
SLC25A16
RPL8
ZNF517
ASIP
DCXR
PRMT2
ALDH2
CSHL1
SLC35F6
ZNF391
LIPK
LHFPL5
CLPS
TSGA10IP
SERPINB6
KDM2B
NKX1-2
DEFB107B
DEFB107A
RNASE10
SPHK1
EPHB3
PRUNE2
SURF6
KLHL4
AADACL3
LEFTY1
ATP6V1G1
KCNMB2
FAM189A2
NLGN1
DACH2
LANCL3
CFLAR
RNF213
TRIM64B
KLF3
SMAD3
RNF43
CAVIN3
TMEM266
F11
TMEM220
HES3
ICMT
FRS2
SLC39A8
KMT2B
ZIC5
MECOM
SOX15
TP53
RPS10-NUDT3
RPS10
HES5
PANK4
RAB25
FAM153B
DLST
MYOM1
VSIG10
NCALD
PRSS41
CYP1B1
SLC9A4
LPCAT4
NFIX
MOV10
GPR160
OVCH1
TGM7
ZNF202
ST18
EPB41L1
CDC25A
CACNA2D1
DTX2
GADD45G
SRSF4
SMCHD1
CDC42EP3
SDHC
PSEN2
GRAMD2B
ZCCHC3
CHRNA9
GCLC
LRRC59
SOX5
GAST
MRPL18
PNLDC1
PMEPA1
STAC3
MT1E
MINAR1
HLA-F
NAXD
SALL3
SLC20A2
IHH
ETS1
IER5L
ARID5A
ABCF3
CYRIB
DPH6
SLC22A23
SLC7A5
FGF2
RBFOX2
SLC2A11
ZNF90
PPP1R3B
LFNG
NCOA7
LRRC4C
LRRTM3
GALNT8
GATA3
SLC24A1
KIF19
PLEKHA7
LIFR
DCLRE1C
ABHD11
ITM2B
ZSCAN12
TMCC1
SUCO
CDH10
AJAP1
TFPI
CCN2
LHCGR
BARX1
ZNF649
PRKAA1
NEUROG3
PRR15
SP5
SULT6B1
OAZ3
PTPN12
SLC10A2
CSDE1
TNP1
EPB41L4B
ERICH3
DPYSL3
TMEM41B
CCDC85A
ZFYVE1
TMEM241
WNT5B
SPAG9
KLHL5
SPP1
CMC2
CPA5
PAN2
IL23A
SLC35E4
GGTLC2
KRTAP1-1
KRTAP1-3
PLPP3
VPS37B
TSPAN18
TLL2
OLIG3
RND1
SRRM4
GLB1L3
ARID2
PIN4
NANOG
H3-2
ZNF536
TACC2
CCDC167
ADA2
SASH1
MRTFA
ACSL1
CHCHD3
TRPM3
VMO1
GLTPD2
ANO10
ABHD5
CYP1A1
THBS2
OR6J1
PDPN
RAP1A
ATP5F1E
ZSCAN10
ITPK1
ZNF624
ZMIZ2
PCSK1
TMEM183A
CCDC141
CORO6
MPZL2
FZD10
RPSA
DYDC2
DYDC1
GLI2
EPHA4
RHNO1
FOXM1
EIF4B
GPSM3
SPATA22
FAM126A
ZNF729
RTN4
MS4A12
EEA1
CCDC102A
ADGRG5
RAPGEF5
RUNX1T1
TRIM39
MTHFD1
TTC39B
RNF19A
S100A13
TUT4
PLD5
ADAR
PROM1
PEA15
TMEM9B
TRIM34
GINS3
FAM83F
PLAAT3
RPUSD3
OCLN
FOXE1
SDSL
RFX4
GCNT2
AUH
INSM1
RBM20
LAPTM5
CAPN10
HECW1
STOM
USP48
RNF138
C19orf25
MMAA
KRTAP12-1
SET
CCDC172
GNAI2
KLF6
RBMX
MRGPRX3
ETNK2
PLIN2
ROR1
PCDH18
LRRC74A
CECR2
NEBL
TSPAN14
ZMAT2
HOXB1
HGC6.3
CLEC7A
OLAH
MPI
NRCAM
FOXD1
ABCC10
SCD5
EZH1
SKIDA1
ZCCHC4
MLLT10
RGMB
HLCS
DDX3X
KLF7
ZBTB2
SELENOT
IGSF1
GLRB
TCF7L2
CDH4
TAGLN3
CNBP
COX8C
C1orf54
APH1A
IL1RAPL1
LILRA3
SYBU
SIGLEC11
STOX2
TTLL6
ZC3H12B
CXCR1
PPP1R37
BIN2
PBLD
HNRNPH3
CLEC6A
KLHDC8A
SLC16A12
HAUS6
SGMS1
RAB1A
FAM24B
MYLK3
STMN1
ZFP64
THOC2
CCR3
LRP5L
KRT77
TNC
RFFL
SYNDIG1L
DHDDS
HK2
UPRT
GJA10
SLCO4C1
CEP152
SBSN
GAPDHS
YWHAQ
RCC2
ODF2
ZC3H4
FAM162B
PRKCA
PHC2
ZNF566
JAG1
SH2D4B
SLC35G4
TTLL7
ID1
IGFBPL1
HOXD1
PLAC8
NANP
EFCAB8
PPP5C
RAP2C
PPP1R8
UNC5B
THEM4
AKIRIN1
TAF13
ZNF260
KEL
ITPRIP
SLCO5A1
FGFR4
VSNL1
KDELR2
ELAC2
IFI16
RPRM
FAM81B
C12orf75
STRA6
IL21
MAGEB17
ALPK3
MSL2
SLC24A3
LIMCH1
FUBP1
DNAJB4
TINAGL1
GPC6
SLC36A1
ATR
OR2S2
RPE65
ADGRA1
MAN2C1
PADI6
TOX3
TBC1D1
SYTL2
EGFR
C1orf167
SUB1
ZNF730
ARL5C
DPP4
KRT82
INSYN2B
NSMCE4A
PRSS8
RASSF8
CLEC9A
DERA
OR2A1
ARRDC2
C1R
KLRC1
SUCLA2
JAM3
LOC107986453
SLC13A2
AIFM1
COL26A1
LHX8
MARCHF2
EMD
EIF4EBP2
BAMBI
MFF
DDX18
TFAP2C
KCNA10
TCAF1
POLR1F
KMT5C
C7orf33
TMEM14A
SLC3A2
CNOT11
TKT
CNKSR3
CCND3
TAF8
ZNF747
FFAR1
TMEM114
ANKRD66
SLC25A35
RANGRF
FOXP1
CHN2
ERMN
DLX6
CPVL
SCGB1D1
GFRA4
HRG
CDCA7L
ARF6
TBCA
PHF19
SFRP1
ZNF25
NHEJ1
MGRN1
ZNF469
C16orf78
KDM4A
LBH
PGBD5
BRINP1
SEPHS1
GOT1L1
ZFP36L1
SMIM11B
SMIM11A
SLC2A14
SORBS2
CNMD
CDH6
ZNF831
ARHGEF4
CPN2
PITX2
ACP3
GTDC1
SHF
MYCL
HYOU1
GEMIN8
KLF5
TSPAN5
RAI14
GREB1
HCAR2
FMN1
RAB42
IFITM3
IFITM1
IMPA2
MAEL
ILDR2
FOXO4
IL20
DUX4
ST6GAL1
C10orf120
ARRB2
DIRAS3
PELP1
TUBB
MDC1
ATG9B
ABCB8
NODAL
PPP1R21
MB21D2
RFC2
ARMC12
ARSD
TULP4
SDS
NCBP2AS2
NCBP2
ABCA5
MSI2
YWHAE
CAMTA1
CMTM4
ARAP3
SLC16A8
MED4
TMEM184B
DGLUCY
PIK3C2A
MYH9
ANKRD28
UBASH3B
UTS2