ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1813584 | MRC-5
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◣ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX3367070: TE-5

◢ SRX277134: T.T

◢ SOX2: STRING

NRARP
MTF2
DUX4
SMARCA2
MAMDC2
REST
CDX2
SOX2
NES
NAV2
FAM227A
CBY1
TMPRSS11E
DPPA5
SACS
SOX6
ARHGEF38
FRG2C
PIPOX
OTX2
ZNF483
METTL11B
WDR74
DNMBP
MUC1
ID3
MTRNR2L8
ZSCAN2
CACHD1
AGO1
HMGB1
NDUFB5
MRPL47
LFNG
DUSP6
NRG1
TCF7L1
RMND5B
ANKRD1
CD99L2
LRRN1
MTRNR2L1
SFRP2
PTMA
GOLGA6D
NTRK2
HDAC9
SOCS3
MUC3A
GIMAP5
FAM222B
FGF1
SPATA45
IFRD1
PF4
GDF11
BCOR
PHC1
PPBP
SHCBP1L
MFSD4B
SNRPN
PRICKLE1
OBI1
MTHFD1L
SAMHD1
RPH3A
SRRM4
BTG2
LMCD1
OR5AR1
GAD2
FLAD1
ZSWIM3
ACOT8
CLDN9
MED25
FUZ
POU5F1
EDDM3B
SLTM
APOBEC3F
SMCO1
FBXW11
GRK6
TALDO1
PLPP2
NOTCH1
FRG2
ARID2
DNMT3B
MED12
ZFHX3
DDX17
GSN
ZNF608
TDGF1
ABHD11
HESX1
MOBP
SHISA5
ETV1
SLC7A5
RASGRF2
VENTX
ZNF398
MRPL20
NADK
ETS1
NFE2L3
ZNF775
RIIAD1
SCGB3A2
PMEPA1
DDX43
FGD3
UTF1
WFDC8
PSMD9
HPD
NANOG
VCAN
ZNF343
RCN1
ETV4
COL23A1
GOLGA6B
CCDC200
SNX16
NCDN
KIAA0319L
FGD4
LEFTY2
GOLGA6A
CELF3
TRAPPC8
FZR1
LZTS1
CER1
CELF4
IER5L
CYP1A1
DAGLB
USP44
GADD45G
MYSM1
TRIM24
FGFR2
ADAM28
FAM120B
HES3
ICMT
PHF5A
ACO2
FZD8
FIGNL2
FBP1
GPRC5B
NRCAM
LIN28B
FGF2
MTRNR2L2
MSH3
DHFR
TRIM48
KMT2B
GNAI2
PARP1
PPP1R16B
SNURF
GOLGA6C
CYP2S1
SLA2
RIF1
SOX5
ESRP1
GPSM3
IL34
MCCC1
CYTH2
KIFBP
CDC42EP3
FRAT2
MRS2
SGMS2
FBXL19
LEFTY1
SAMD5
FBXO40
PER2
TRIM2
TRIP4
PALM2AKAP2
TMCC1
DHDDS
DND1
SLC35A5
MACROH2A1
TMEM41B
ATG3
FOXP1
AMN1
RASA1
PRDM14
FZD2
HOXD13
HOXD12
CCDC169-SOHLH2
CCDC169
HGS
ARL16
WNT5B
IQCH
AAGAB
LIPK
LRRTM3
ZNF532
PLAGL1
CRYGB
SPIC
SNAPC3
SLC2A14
ECE1
MDN1
ZFC3H1
THAP2
LINGO1
JPT1
TRIML2
PDPN
ITPRIP
GJA1
APOBEC3D
APOBEC3C
GXYLT2
CCT2
MAD2L2
SCAF4
LIMCH1
SPRY4
PREX2
SYT2
ST18
POSTN
BEND3
UNC13B
PDCL
RFX4
TMC5
CDC14B
PRR15
DHX32
SOX14
CEP41
DGLUCY
ECT2
CHFR
PCBP1
TGIF2-RAB5IF
TGIF2
TUBB
MDC1
ALDH1A2
NDUFS5
AASS
DCAF4L1
WBP1L
BFSP1
PCLAF
ONECUT2
ZNF436
DDR1
FAM180A
ITGB5
VOPP1
DRAXIN
MTM1
SALL3
ZNF335
EEF1A1
GDF3
LRRTM4
CAPRIN1
KCNN2
FAM200B
DLL1
PIN4
L1TD1
VWCE
TES
HMOX1
GABRQ
ZSCAN10
TIMP4
WDFY2
DPH6
FOXD1
SRCIN1
SRSF7
OLFML3
HBG2
IFT80
RTN4
GET3
ADA2
SH3BP4
TNRC18
TBC1D16
ARIH1
CARHSP1
ITGB3
NDUFV1
KDM2B
PEAK1
HMG20A
SORBS2
KDM2A
NEBL
LOC100129484
CCDC130
MOG
TJP2
SLC39A8
MAST4
STK31
ZNF781
ISOC2
TIAM2
SENP2
CACNA2D1
WDHD1
SOCS4
SYN3
EXT1
ZNF304
PUF60
SASH1
DENR
TGIF1
MMACHC
DUSP12
AHCYL2
USP7
NDUFAB1
C8orf58
TNC
AK4
WDR49
PYCR2
DDX3X
GCNT2
GTF2I
PNRC1
DST
LYPD6B
UGT1A6
SLC46A1
CHN2
KCNJ1
ALDH7A1
RGS3
RBFOX2
C10orf95
SINHCAF
NDST1
SNX19
PLEKHG1
UNK
AEBP2
AKIRIN2
H3-3B
PTAR1
ACVR1
ZNF536
TNFSF8
GABRB3
KRT8
OAZ2
ANK2
ABCB5
SEC22B
CAPN3
ADAR
ZCCHC3
TOMM40
TMEM47
VANGL2
TTYH1
SLC20A2
PACSIN2
DOK7
ABL2
LRIG1
ESR2
CAMTA1
EMSY
C20orf96
PGPEP1
ZNF296
GEMIN7
C1orf127
FAM24B
PSME3IP1
SHF
TSKS
AP2A1
PSIP1
LIN28A
FZD5
UFD1
TRIB2
CDC45
NECTIN1
RASAL2
PXMP4
KDM3A
HHIP
KLF3
CHD6
UBAP2
CCN2
PDE1B
FXYD5
HES1
REV3L
AASDH
ZNF565
PITPNM2
DIDO1
AUH
SMAD3
RTBDN
MAST1
SIX2
ZBTB45
CCL26
GLDC
SLC33A1
NPSR1
LMNA
TPST2
DET1
TMEM43
MVB12A
CHCHD4
TIAM1
TESK2
PRKAG2
PDIA4
FAM20A
INSM1
ZNF600
TRPC4AP
SLAMF1
MYCL
SLC3A2
TCF7L2
SLC23A2
TFE3
TSPAN14
ZNF649
KLF7
SLFN12
TMUB2
DPPA4
ZNF195
RPL8
BCL9
ATP6V1G1
ZNF664-RFLNA
ZNF664
CCDC92
SUCO
PPP2R3A
PRRC2B
RMND1
ARMT1
NTN5
MARCKS
PXDC1
PRODH
LOC102724788
ZNF875
VPS37B
F11R
SMIM14
TLE1
CDH10
SLC25A36
FOXO6
CHMP7
MAGEB2
NEUROG3
PGBD5
TRPM1
CNOT11
WDR36
LRAT
SOAT1
CTNNA1
SPHK1
LRRTM2
PYGB
FAM153B
PDGFA
RNASE9
TNRC6A
ESX1
LRRC47
LIMK2
ABCC10
DISP3
VASH2
MSANTD4
SAPCD2
KLF5
BFAR
KLF6
H3C15
H3C14
H2AC19
H2AC18
CNGA1
STMN1
STOX2
B3GALT5
NUP160
CFLAR
ZSCAN9
ZBTB18
TFAP2A
SLC16A13
MUS81
CFL1
PGK1
MAP6
OSBPL1A
BIN2
BCAT1
MMP10
ZNF428
EPB41L1
CRISPLD1
ACSL1
MTHFD1
KCNIP4
ZMAT2
SELPLG
YIPF4
ZFP3
CSF2RB
BRINP2
PAK1
INO80D
PLPP3
TET3
ZNF552
ZNF517
DACT3
CDYL
NXPH2
PNCK
GSAP
ARHGAP42
APOBEC3G
NIPAL1
GAST
CCDC85A
S100A16
PIK3R3
ACOXL
CFAP20
G3BP1
ETV6
CPT1A
LRGUK
YAF2
KRTAP3-1
SACM1L
DICER1
ZNF202
CELSR3
TNFRSF6B
DTNA
ABCC2
F11
SORT1
DEFB114
DEFB113
BORCS6
TRMT2A
RANBP1
SYNCRIP
BBC3
DPP3
IFI16
EXOSC9
ZNF814
TKT
GLI2
PTPRN
TP53
ASIP
GPC4
OR2T1
CXADR
RFLNA
TACC2
SLCO5A1
OGA
TOX3
SAXO1
POLB
MRPL18
CAAP1
DHRS3
NUAK1
MBOAT2
SDCBP
SDHC
UBQLN4
LAMTOR2
DDX39A
CD200
SALL4
NEPRO
EPHB3
HMGN1
BAHCC1
ARSL
DNAJC7
CTNND2
ANAPC15
PSME2
CD2BP2
HOXB1
KNTC1
ERMN
GALNT8
SLC6A8
MEX3D
SNAP23
TRIM13
ID1
C22orf39
MEIS2
SPTLC2
ACSL6
PREP
UPF1
PIF1
MYEOV
HSPH1
DHX8
HES5
PANK4
CSRNP2
PPP1R18
NRM
AJAP1
AIRE
LEKR1
ESRRA
CATSPERZ
EMC9
TIAL1
TSPAN5
NKIRAS2
SH3GL3
LLGL1
DCLK1
EPHA4
SHC3
STRA6
STAC3
SMARCAD1
RABGAP1L
GADD45A
SLC25A11
RNF167
ABLIM1
LONRF3
WASF1
CDC40
TPCN2
OR6C3
VEZT
FGD6
PLCH1
YLPM1
ERBB2
AFF1
ARID5A
TLE3
RAB30
DPYSL3
CCL2
CAPZB
TBC1D23
ADGRL2
MSL2
IL7R
GABBR1
CNMD
NACAD
ZFYVE1
TUT1
CNR2
SDCCAG8
CEP170
CHD7
KRBA2
TCHP
PTPN12
NWD1
ISL2
HELLS
TLL2
LRTM1
SPATC1L
RNF43
TLX3
GUCA1A
RAB23
SLC10A2
SYBU
PROM1
ANKRD40
FOXN3
ERGIC2
OCSTAMP
CTBP2
RNF213
PIK3C2A
PAFAH2
EXOC7
CTTNBP2NL
PLEKHB1
CCDC33
C1orf198
ARMC12
KLHL24
OSBPL2
PRAC2
PRAC1
DUSP29
JUP
PPME1
C2CD3
SMAGP
SP5
AP2B1
NCOA7
HSBP1L1
COPZ1
PGAP3
KIAA1522
LGR6
IL17RD
LNX1
VSIG10
SRP68
TMEM114
CHCHD3
TAGLN3
GJA10
ZBTB40
LHFPL4
MEF2C
SET
SPATA22
ATG9B
TRDMT1
RARB
GCSAM
ANKRD6
ST6GAL1
CCDC88C
C1R
ASH2L
LYPLAL1
RPL27
ZFAND3
RAD54B
RAB17
RRAGA
DLST
IFIT3
SFPQ
RAX
THEM4
STK32C
LRRC27
ARSG
SLC25A16
RGPD1
EGR3
ERVH48-1
SPATA12
CLCF1
LYPD1
H4C14
CACNA1S
CCDC167
PLEKHG5
PEA15
YEATS2
PRPS1
PDE4D
DTX2
TCAF1
PWWP2A
PRND
PES1
ITGB1
RBM20
PCDHB8
ANP32A
TCF4
SCOC
ITPK1
NEDD9
NCBP2AS2
NCBP2
ETFB
PCYT1B
MBNL3
CDC25A
ZNF627
C1QTNF7
GOLGB1
RAPGEF5
PHLDB2
AKIRIN1
GLIPR2
FAM126A
NKX1-2
CEP63
ANAPC13
SEC14L5
E2F7
TMEFF1
RESF1
CMTM4
CUEDC1
NR6A1
ROR1
TMEM107
MATR3
ZDHHC5
FAT1
PRKCA
GABPB2
RBM39
ZSWIM4
NATD1
ETV5
FGF4
RNF19A
TRIM22
MTUS1
TRPM3
KRT6B
TRIM5
GALNT3
PCDHB16
MDK
OAT
FZD7
ARHGAP19
ZNF318
SPAG9
EPB41L4B
UHRF1BP1L
RBBP9
ABCB8
ZBTB8OS
RBBP4
ENO1
ADRM1
ACCS
RGPD2
ZFP64
WDR44
IGBP1
TMX2
MED19
MANSC1
HEXIM2
FAM181A
NFYC
CNP
ZFAND6
ZBTB2
RASSF8
CDC42EP4
HEY2
DLX6
NRXN1
TIA1
ZFP36L1
ARSD
THRB
JAG1
CNKSR3
MOSPD3
TBL1XR1
ARF4
MIDEAS
PIMREG
TCN2
KIAA0895L
FGF19
SKIDA1
PHC2
SULT6B1
HNRNPDL
GATA3
EP300
ENOPH1
PYGM
FSBP
TSNAXIP1
RANBP10
ANKHD1-EIF4EBP3
ANKHD1
NARF
DNAJB1
SUFU
ACTR1A
PDHA2
TP53INP1
ATAT1
IPO11
CYB5R2
SCHIP1
TRIT1
HBP1
LHFPL5
CLPS
EPB41L2
PCDHB5
HECW1
PCDHGB2
PCDHGA5
SLC38A9
GDF5
HLTF
ZNF90
STX16
CNN3
GSPT2
AGL
SPRY2
TMPRSS9
ZIC4
TFAP2C
SYAP1
CCDC88A
PRSS23
FOXB1
UPP1
CSGALNACT1
PAN2
IL23A
FZD9
ZBTB6
SHROOM3
LOC150051
SYNPO2
ZNF37A
ZNF358
SPIRE1
YWHAQ
QSER1
RBBP6
NKX2-2
AKAP9
FERMT1
RHBDD2
LPCAT4
FZD10
PSMB7
ZNF469
SPHK2
RPL18
ESR1
CLEC9A
SMPDL3B
RNF186
PTX3
HNRNPL
PRMT2
BCL2L11
LITAF
EXOC5
AP5M1
LYRM1
DCUN1D3
PCDH1