ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10407084 | Esophageal squamous carcinoma cell line
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◣ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

SMCO1
MTF2
FAM227A
CBY1
NDUFB5
MRPL47
NAV2
LTBP2
MYEOV
SYNE2
LIMK2
DDX17
MCCC1
VWCE
PLPP2
CDC42EP3
MED25
FUZ
PYCR2
IQCH
AAGAB
PHF5A
ACO2
NEBL
RFC4
OR7A10
WDR74
BCAS1
MAST4
CAPNS2
PTMA
KMT2B
KIAA0040
JUP
SH3BP4
ST6GALNAC2
HES1
ZSCAN2
RBFOX2
SYT2
HMGB1
ZNF335
ZNF37A
PXMP4
CDH13
NTN5
NIBAN2
OR7C1
OR7A5
LFNG
PSME2
EMC9
KRTAP3-1
PLA2G6
HERPUD2
ACYP1
F11R
ETV4
MTMR1
RFLNA
STK31
ZNF609
CNP
FGF2
OPHN1
PHLDB2
CLUAP1
DYRK1B
VIT
LMCD1
EVA1A
CUEDC1
CNKSR3
SRGAP1
ARID2
ETAA1
NOL12
POLR2M
NRARP
PER2
PMEPA1
DST
LYRM1
DCUN1D3
ABCC1
SOCS3
SERPIND1
NOL6
ECT2
HNF4A
HMOX1
IFRD1
GRK6
TMEM205
CCDC159
RAB3D
TEAD4
PHACTR2
KLHL24
IPO4
SLC2A5
OTUD7B
TUT1
CYP1A1
UNK
H3-3B
FOXJ3
ROS1
TMCC1
JMJD7-PLA2G4B
JMJD7
YLPM1
CCT2
BAHCC1
MMP10
TJP2
POLDIP3
CHRNA9
MOB3C
MIDEAS
LTF
ITGB4
NOTCH1
ELAPOR1
C1orf194
SVIL
SMCO2
MT1B
CPNE2
NDST1
RABGAP1L
CHST12
HGS
ARL16
PLEKHG1
MYH9
ACP3
TRPV4
MAP3K2
SPRED2
SOX2
DNAH5
CALHM4
C1QTNF7
CHD8
FBXO27
FBXL19
SLC16A13
HDAC9
OSBPL9
SINHCAF
MTHFD1
NINJ2
TMUB2
CEP63
ANAPC13
CDCA4
GGT1
KRT6A
GABPB2
EP300
CEP41
TSNAXIP1
RANBP10
ATXN1
ICE1
TRMT2A
RANBP1
SPTLC2
SELENOI
ADGRF3
OGA
SPRY4
SORT1
SAR1B
SRSF7
PXDC1
KCNMB2
SPHK1
UPK1B
FGD3
SIX2
SLC33A1
FHL2
OAZ2
MTHFD1L
NDE1
MARF1
PIN4
CA12
JPT1
TNRC18
LOC100129484
ETV6
WDFY2
ENKUR
CCL26
SFPQ
MUS81
CFL1
NAALADL2
UBQLN4
LAMTOR2
CMYA5
PRMT5
TRERF1
EPHB3
ZBTB40
HAO2
ZNF117
DDX59
AHSG
CD2BP2
AKAP6
DENND2B
AKIP1
SNAP23
ZNF106
SIRT4
TFB1M
PDIA4
ABLIM1
LYPD5
MALT1
ABCC10
ANO3
GET3
GREB1
CELA3B
DNAJC16
CASP9
RNF152
ELFN2
PELATON
CSRNP2
TGIF1
E2F1
SLC20A2
CEMIP
TUBB
MDC1
TMEM258
FEN1
TNFAIP2
ZFHX3
CTNNA1
LRRTM2
GTF2H4
LTA4H
MAPRE2
FAM83A
CERS3
TMEM212
CFAP20
G3BP1
KRT13
FURIN
C10orf67
GDA
S100A16
CYTH1
CYP2S1
AKIRIN2
LGALS9C
GNAL
CBLC
TMEM221
LRRC25
SLC25A47
ARIH1
MTUS1
TOMM40L
APOA2
ARHGDIB
SULF1
OTX2
DGLUCY
ZNF57
ZFAND3
KLHL6
ADAM28
TRIM48
NDUFS2
ADAMTS4
EPM2A
UFD1
CDC45
TIAL1
ATAT1
TPM1
PPP6R1
PLS1
H4C9
HID1
WDR36
PLEKHG3
KRT15
OCIAD2
APOBEC3B
SENP8
MYO9A
RCOR1
NRL
DCAF11
TMPRSS4
MLEC
ADAR
SPO11
PRRC2B
SHISA7
DGKH
UBB
ETV5
RHOBTB2
ZFR
RIMBP3C
RIMBP3B
EPHA2
RPL27
RSU1
ZNF304
PIF1
ITGB1
RBBP8NL
MED9
PRKDC
MCM4
TRMT12
LGALS9B
SLC12A7
VPS37C
MLLT11
CDC42SE1
ARSG
SH3D19
OSGEP
APEX1
PEMT
KLRK1
RASAL2
ZDHHC5
UQCRQ
GDF9
ID3
TOMM40
PIK3R3
RPL6
TTC6
FOXA1
LCLAT1
C18orf21
PTPN11
ZBTB7C
OTOGL
CAPRIN1
C8orf58
FAM220A
ID4
ZNF76
IL1F10
CPT1A
ID1
SCOC
EFHC1
ARHGEF19
LBH
DLX5
ZBTB20
GBA
TNFAIP8
NOX4
GADD45G
ANKHD1-EIF4EBP3
ANKHD1
EXOC5
AP5M1
MOG
RIOX1
CA6
NAA40
ABCC5
C9
H4C14
CYB5R2
H4C15
LDAH
ZNF80
SSBP1
RBM25
CAPN13
FOXO6
DPP3
NEK10
ZFP36L1
MCTS1
SLC25A11
RNF167
PYM1
DGKA
SH3PXD2A
CALM1
PARP2
FAM91A1
GSTP1
KIAA0930
ZNF286A
DKK3
MMP13
CHD6
HEXIM2
EXOC6
CLDN10
TBX4
ADNP
ZNF710
RIPK1
GPR158
PTPN1
XCR1
GSN
KCNN2
UPF1
ITPK1
TUBA1C
SPAST
TMC1
SFR1
ROPN1B
CLDN1
RIIAD1
CELF3
KDM2A
SDCCAG8
CEP170
METTL9
CLDN4
VPREB3
ZNF70
GOLGB1
AHNAK
OGT
LOC100509620
KLHDC8A
GPR137
ASXL1
MUC13
CYS1
CRYGB
ZSCAN9
LGR6
ALCAM
LRRC45
CENPX
ITPKB
PPIH
SNRPN
SNURF
DNAJB1
KLHL13
CRKL
TRIM29
SLC7A5
TMEM107
MNT
NFAT5
LIMA1
SHANK2
MOBP
SPAG9
YDJC
CCDC116
CLOCK
SLCO1B3
SGMS2
FBXO48
APLF
TTC13
ARV1
ACOT2
NFIB
TBC1D17
AKT1S1
ZNF268
CAST
MLPH
ITGBL1
MMP20
MEIOB
CNOT11
SMIM3
RAB40B
EMSY
DDAH1
SPAG4
MAP3K9
PPP1R9B
VPS50
HEPACAM2
WBP1L
SLC25A36
HLTF
PNN
TRAPPC6B
KIAA0319
HACD3
FETUB
PACSIN2
DACT3
RGS2
SLC45A4
PPP1R12B
TRIM2
CCDC130
CLEC9A
XAB2
PCP2
RNF13
CRYGD
CRYGC
PLXNB2
MFN2
TBC1D23
AGPS
CELSR3
PGM2L1
HMGCS1
EPB41L1
CRISPLD1
GDF5
CEP250
COX8C
COPS7A
VRK2
TMEM88B
ANKRD65
CCDC174
SDR39U1
UXS1
HEXIM1
ARID1A
RARB
KCNJ15
DDX58
TRIP4
RBMX
BTG1
TMEM87A
GANC
SLC7A11
ZNF250
PCBP2
ST3GAL5
FLAD1
LMNA
SH3GL3
MEF2C
SDHD
DHCR24
UHRF1
MRPL1
MTA3
KCNG3
PCID2
CUL4A
RGS22
GSDMC
GDNF
DNMBP
METRN
TRAM1
NGDN
MRPL16
KRTAP17-1
SPATA12
OARD1
NFYA
RFX1
RBM47
CTSV
RNF216
ZFC3H1
THAP2
MATR3
CSTF1
AURKA
UFSP1
ACHE
BIN2
HNRNPL
SLC25A25
MEF2A
FER
TAGAP
TESK2
WFDC8
DHX8
RTRAF
ANXA11
GALK2
COPS2
MGAT5B
GFM2
SH3BGRL3
MIOS
PTGES2
C1QTNF1
ESRP1
PRR15
SOX14
AP2B1
SH3PXD2B
SRP14
TBCCD1
DNAJB11
CLRN1
ZNF688
IFT52
CHADL
PIM1
KIF11
PPP2R5C
PPP1R42
BFSP1
HNRNPC
NEMF
CLP1
KAT7
TMEM154
TMEM265
STYXL2
HSPH1
ELOVL5
STON1-GTF2A1L
ENOX2
STON1
XXYLT1
HCAR1
OR52K1
VPS37B
POU2F1
METTL3
TMEM52
CALML6
CD55
SMIM5
SHF
POLR3E
DDX5
CEP95
FGF1
NME1
CREBL2
SLC39A9
ERH
MRPL21
IGHMBP2
EFNA1
OLFML2A
ADGRF4
RAB30
SLC25A45
FRMD8
CCNB1IP1
STUM
INPP5A
ZDHHC18
SENP2
RAD18
PRKAB2
VKORC1
GLO1
PLAGL1
ADGRL1
ING4
CTXN3
RNF130
INPP4B
RAD52
NATD1
HOXA9
DOCK9
CLEC4F
DISC1
PIK3C2G
CALHM5
FJX1
AFTPH
ZNF695
SPTSSA
SMC1B
RIBC2
PSG11
ZNF195
ACSL6
ADH7
BTRC
BCL11B
BAG3
KIAA1671
CFAP45
ABL2
ELL
MEOX1
HOXD3
MAB21L3
LOC105370980
KIF2C
ENTPD7
PLEKHH2
CSNK1E
RUNDC1
PTGES3L-AARSD1
PTGES3L
SERINC4
HYPK
C1orf87
MANSC1
YWHAG
ARNTL2
RPL3
SF3A3
TEDC1
CRIP1
P2RY12
CD59
IL1A
MESP2
CALD1
PRICKLE3
ZNF222
SLC51A
WWC2
IL7R
COX8A
RFFL
HCAR2
VPS8
KCTD1
INO80C
GPR141
STAU1
DDX27
MAD2L1BP
GTPBP2
OR13C2
EIF4A2
WARS2
PPP1R3G
SMYD3
ITPRIP
FNIP2
C3orf20
PRDX6
SOX6
NRCAM
MSANTD4
PRXL2A
DCXR
NUDT19
DENR
RNF217
H4C12
SLC35E2A
EMP1
EPHX4
ANKK1
DAPP1
XIRP2
RBM39
MYLPF
CTH
TBC1D10B
HROB
PTPN6
C12orf57
TNRC6B
PLD1
NUMA1
LRTOMT
LYPLAL1
USP39
TEN1
ACOX1
DOCK5
RAP2A
NKIRAS1
NF2
NR1D2
KHSRP
POLG
KDM7A
STAMBP
PALD1
SCNN1A
LTBR
USP48
KRT23
CSNK1A1
REM2
ZNF700
SLC14A2
KDM3A
RBBP9
SPRED1
BAZ2A
BMF
CEP70
DPP9
PTPRH
CEP128
CRYGS
RNF43
SPRING1
RNFT2
RCC2
CLPB
PNKP
IRF2BPL
IGBP1
LIFR
THOC5
NMUR2
ETV1
TSPAN5
PWWP2A
RPA2
ABI1
C1RL
ZFP90
DENND4A
NUF2
MTHFD2
XPO6
USP44
RMND1
ARMT1
ZCCHC8
DAAM1
CCDC117
TPST2
FRY
CYP21A2
ZNFX1
CEP68
NCOA1
PITX3
GBF1
MRPL3
POLR2H
CLCN2
DRG2
CCDC88B
PHF12
COX7A2
RBM23
MAP3K5
UTP3
GNA12
NADK2
PRDX1
LECT2
NCBP2AS2
NCBP2
HBP1
TTI2
EIF1AD
BANF1
PODNL1
DCAF15
LY6E
FOLH1
LRAT
SLMAP
RANGAP1
CLN3
APOBR
CDK12
RAB20
KLF1
GCDH
TOM1L2
DRC3
ZSCAN20
ZNF839
WBP2
PICK1
ILF2
PSME3IP1
IP6K2
RSPRY1
KMT5A
CMSS1
ZC3H10
RPL41
C6orf226
KRT3
TMEM156
ZNF624
GATB
CXCL6
TINAGL1
MRPL34
DDA1
ABHD8
ABHD11
EIF5
CEP295
KLHL5
CHMP4B
DDX11
EEF1G
ZFYVE1
FBRS
RAD21
HPN
NFATC2IP
PSMD3
RBX1
DUX4
SMARCA2
MAMDC2
REST
CDX2
NES
TMPRSS11E
DPPA5
SACS
ARHGEF38
FRG2C
PIPOX
ZNF483
METTL11B
MUC1
MTRNR2L8
CACHD1
AGO1
DUSP6
NRG1
TCF7L1
RMND5B
ANKRD1
CD99L2
LRRN1
MTRNR2L1
SFRP2
GOLGA6D
NTRK2
MUC3A
GIMAP5
FAM222B
SPATA45
PF4
GDF11
BCOR
PHC1
PPBP
SHCBP1L
MFSD4B
PRICKLE1
OBI1
SAMHD1
RPH3A
SRRM4
BTG2
OR5AR1
GAD2
ZSWIM3
ACOT8
CLDN9
POU5F1
EDDM3B
SLTM
APOBEC3F
FBXW11
TALDO1
FRG2
DNMT3B
MED12
ZNF608
TDGF1
HESX1
SHISA5
RASGRF2
VENTX
ZNF398
MRPL20
NADK
ETS1
NFE2L3
ZNF775
SCGB3A2
DDX43
UTF1
PSMD9
HPD
NANOG
VCAN
ZNF343
RCN1
COL23A1