ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10035162 | KYSE-140
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◣ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

MCCC1
MTF2
NRCAM
NDUFB5
MRPL47
SUN1
HOXA9
ETV1
GRK6
HDAC9
NEBL
OR13C2
YEATS2
KLHL24
ANKUB1
CYTH2
HMGB1
OR7C1
OR7A5
FUZ
CCL26
CYP21A2
MANSC1
KRTAP3-1
CNP
EMC9
LNX1
CELF3
DGLUCY
PDPN
HGS
ARL16
ZNF428
PXMP4
FAM220A
RAPGEF5
MAP1B
ARID2
SMC4
IFT80
TNRC18
SLC33A1
IFRD1
UFD1
CDC45
PHF5A
ACO2
PDIA4
TMCC1
PLEKHG1
KMT2B
STMN1
FXR1
MARCKS
NADSYN1
TOMM40
PTMA
MAST4
SPRY4
ETV4
KRT13
LGSN
FBXO27
ZSCAN2
OGA
C3orf20
NME4
SAXO1
RRAGA
F11R
AHNAK2
POLDIP3
SLC25A11
RNF167
DDX17
FBXL19
PIF1
LIFR
WDR36
DST
FAM227A
CBY1
RCOR1
AGR2
JUP
MIDN
DACT2
DAGLB
TBC1D17
AKT1S1
FNIP2
KBTBD2
CALR3
C19orf44
PRORP
PPP2R3C
CLDN4
WASF1
CDC40
ZNF775
CD2BP2
NRARP
SYNCRIP
PTCD2
MRPS27
HNRNPA0
DLX5
ESRP1
IQCH
AAGAB
PIK3R3
KRT6A
TMUB2
VPREB3
PLPP2
CP
OAZ2
HSPB3
H2AZ2
PPARG
CORO1C
YWHAG
SIX2
RPA3
GET3
FGF19
ITPRIP
SINHCAF
MEF2C
ID1
HEBP2
TUBB
STAG3
GPC2
PPME1
C2CD3
NOTCH1
NKIRAS1
ARHGDIB
FMNL3
VGF
SNAPC3
RPL15
NWD1
MOSPD3
DOCK9
GSN
TSPAN13
TRMT2A
RANBP1
DKK3
SLC4A7
KRT8
GOLIM4
BAZ2A
POLB
C15orf62
CSTA
HSD3B1
PPP1R42
H3-3B
SLC16A13
TLX3
KNTC1
DCSTAMP
PRKCI
GMCL2
KDM2A
NDST1
GPSM3
LGALS8
MTMR1
CEP63
ANAPC13
SLC25A36
ABHD16A
KIAA0895L
IPO11
EXOSC2
SPHK1
ZBTB40
COPS7A
HSPH1
FRAT1
ZSWIM4
RADIL
ZNF304
PLAGL1
CNKSR3
ATXN7L2
TJP2
NPIPB5
METTL11B
GREB1
RASAL2
EFCAB12
NUP160
EGFR
VOPP1
SPPL2B
LSM7
FZD1
ANAPC15
HBP1
RIOX1
EDN1
HEXIM2
PTP4A1
PAAF1
GOLGB1
SOSTDC1
GADD45G
ETV6
STK32C
LRRC27
GDF5
CEP250
GADD45A
SOX2
KLHL13
NPIPB12
CLIP4
RAB4B
MCM7
AP4M1
NEMF
NME7
BLZF1
UMAD1
RNF41
CCDC130
DHX8
MTHFD1
RHOBTB2
GBP6
CDC5L
ITGB1
MAP3K9
DNM1L
SMUG1
LRRC34
ANAPC10
ABCE1
NSUN3
DHFR2
NPIPB8
TES
AKAP9
GTF2H4
ZWINT
MEGF8
DCUN1D1
CSRNP2
ARHGEF19
RAB30
IL23A
TNFAIP8
ESRRA
SEL1L
MYLK
PIN4
NASP
CHMP4B
MCM10
SERPINB13
EXOC5
AP5M1
EIF3B
PACRGL
ERV3-1-ZNF117
ERV3-1
SLC45A4
KRT15
SLC20A2
TEN1
ACOX1
CDK12
BTC
YLPM1
EMSY
BZW2
ANKMY2
GET4
DDX3X
CFAP20
RSF1
AAMDC
DNAH2
SFPQ
H3C6
NPFFR1
FZD2
RPL27
EXOSC5
BCKDHA
ELL
FOXA1
GBP5
ISL2
SLAIN1
NDE1
MRPL21
IGHMBP2
GDPD5
HNRNPDL
ENOPH1
GNA12
BAZ1B
DNM2
ZNF335
ITPKB
DNAJC19
ZIC2
UBAP1L
EP300
DMWD
MMACHC
CCDC163
TTF2
ZFC3H1
THAP2
H4C15
H4C14
ERGIC2
PWWP2A
NSUN6
ARL5B
TMPRSS4
ZFP69B
WDR74
SFT2D2
PIK3C2G
FREM1
WDFY2
VANGL2
ERMN
HNRNPC
KXD1
ZNF106
SLC2A4
RAPGEFL1
CAV2
ADO
ADNP
PNRC2
NPIPB11
ZDHHC5
PIMREG
ZNF92
TDGF1
HACL1
BTD
HEXIM1
PFKFB3
NPIPB3
SLC6A6
RAP1A
POU2F1
ANXA11
SLC3A2
CTXN3
CLN3
SLC7A5
UBQLN4
LAMTOR2
G3BP1
ETFB
XAB2
MAPRE2
ZNF37A
CNIH4
ZNF124
PUM1
ADRM1
PEAK1
HMG20A
HLA-DOB
UBTD2
EXOSC4
SNAI2
CNIH1
RPL22L1
CCT2
CMSS1
PTGER4
RAP2B
PIPOX
ZSCAN9
SH3GL3
PRMT5
GABPB2
UBR2
USO1
NPIPB4
DISP3
SSR4
IDH3G
FSCN1
HACD2
GPER1
NSA2
GFM2
HLTF
TNPO1
ZMAT1
STAT6
CCAR1
ZFP36L1
TIAL1
PLCH1
DDA1
FAM76B
CEP57
CREM
ABCA13
ANKRD22
WBP1L
ZBTB8OS
RBBP4
ZNF250
LIMCH1
RBM41
UBL7
INTS4
SVIL
PPP6R3
G2E3
KMT2D
ZFAND3
MAD2L1BP
GTPBP2
PKD1L2
HACE1
GLMP
TAF1A
PMVK
RPS29
SHMT2
KRT80
AQP5
ST18
TMX2
MED19
H2BC8
H2AC8
TMEM101
ALKBH5
NPIPB6
CELSR3
PRCC
TMEM260
ZNF180
KHDRBS1
FOSB
GOLGA5
RPL5
NFX1
RBMX
EMP1
RAET1L
WDR83OS
WDR83
CEP41
CTTNBP2NL
ATP2C1
PCF11
CUL2
ZNF195
TSNAXIP1
RANBP10
MTDH
SYNRG
TUBB4B
TSC1
GFI1B
BRMS1L
KLF12
DNA2
SDHAF3
BFSP1
ATAD2
KMT5C
FEM1A
RTRAF
RGS22
BTG1
PIK3CA
PNN
TMEM52
KLHL7
ZNF627
PRRC2A
NECTIN3
EPHX4
TFDP2
PGM2L1
RAPGEF2
ZNF680
NDUFS5
TRIB1
NCLN
DUSP6
CIC
ARL2BP
HES4
MYNN
RFFL
RAI14
NEDD9
TFAP2A
QTRT2
PBXIP1
CCDC191
SLC25A45
GPR3
LRRC17
NPIPB9
INTS9
HMBOX1
NARF
GAS1
DSTYK
RAD52
CAPN2
ZBTB4
POLR2A
CEP170
SDCCAG8
PSME3IP1
RSPRY1
COX8A
UBE2T
ACTR1A
IGSF9
PPIL3
NIF3L1
RNF31
PSME2
RCN3
HOXA5
CAPRIN1
SSBP1
KIAA1671
PPP6R1
ETF1
WFDC8
GOLPH3L
ING4
RPS12
ARRB2
PELI1
ZCCHC14
ATL1
NADK2
LRP6
RNF216
HHLA2
TOMM40L
EVI5L
ARHGAP27
MTAP
GPNMB
VASH2
ZNF140
LTBP1
DNAL1
RAD51AP1
C12orf4
ARL13B
DDOST
SENP8
MYO9A
SPHK2
ZNF268
DNTTIP2
NR6A1
ITGB5
CEP70
U2AF2
TUT1
TMEM245
ZNF117
STX19
LYPD1
C12orf57
ZNF524
USF3
SIRT2
NFKBIB
MBD6
CDC14B
KDM3A
SHF
IPO4
METTL9
CDK5RAP2
HSD17B3
NEURL4
CCT5
ATPSCKMT
PAPLN
SPAG4
PEX11G
C16orf46
TAF6
CNPY4
HPGDS
GPR146
ATAT1
ZNF277
DOCK4
DAAM1
METTL3
CIART
PAIP1
NCS1
GUF1
MFAP2
USP49
SNX8
HIC2
AKR1A1
MALSU1
ZNF736
PNOC
DHRS3
SYNGR4
ZNF253
ILF3
PSMA6
KAT5
MICOS13
HSD11B1L
CHUK
RAB8A
ELOVL5
TPCN1
IQCD
OSGEP
APEX1
PI4KB
TOR2A
GTF2IRD1
SP8
POLM
MAP3K10
CYP1B1
ARIH1
CLCF1
WBP11
C12orf60
CPVL
TSTD2
NCBP1
RFX1
C9orf72
PPIP5K2
GIN1
H3C1
ZNF688
ZNF33A
TBC1D10B
MYLPF
MEGF9
NDUFB4
ZNF764
NDUFS3
KBTBD4
TMEM256
RPL3
XPNPEP3
ST13
DDX39B
NPAS4
EEF1AKNMT
ZCWPW1
MEPCE
OSBPL9
RPS23
ATP6AP1L
ANKRD28
DAPP1
ZNF384
SP4
SMPD4
MZT2B
MSANTD4
ITGB8
GBF1
TRIM28
NFATC3
ZNF56
MRPS21
NEK10
WIPF2
CASZ1
DPP3
IREB2
NEK2
PPP2R5C
S100A4
EPC1
FANCM
MN1
RABAC1
DIPK2A
SUPT16H
HIP1R
POLR3E
CTH
TDG
SUGP1
MAU2
FAM219A
DNAI1
CLDN22
TUBGCP3
CCDC9
DNAAF3
CCDC167
HNRNPUL1
HNRNPL
SRSF3
FOCAD
DDX39A
ZDHHC12
DACT1
TIA1
SMC3
ZNF687
S100A2
ING1
STAT2
CLTB
SPATA12
TBC1D31
RABGAP1L
LSM10
ATF7IP
RMND1
PSMB6
SELENOH
COX20
ARMT1
ULBP2
CFL1
PIP4P1
CALCRL
POLG
ESYT1
AMACR
HILPDA
ZBTB17
CDK1
AHCY
CCDC146
ZNF3
ITFG2
CTNNA1
MRPS31
MACC1
CLPB
RAB11B
PCBP2
DDX49
COPE
CAV1
ARHGEF17
MCTS1
RBM22
HNRNPAB
GCDH
MIA3
ZBTB37
HES2
RCAN1
CDC37L1
ABI1
TRIM29
CDK13
ERBB3
EGR3
CALD1
GLI2
VPS50
HEPACAM2
TOM1L2
DRC3
GGPS1
ARID4B
SCNM1
LYSMD1
MARCHF6
UMPS
DNMT1
ABCG1
GPR87
TRAPPC9
TMTC4
RUNX2
SRSF7
DACT3
OARD1
NFYA
SIRT4
LDB1
PAXBP1
GBA
USP54
PAFAH2
ZNF823
CACNB3
M6PR
KLRG1
NCOA7
MIDEAS
FAF1
RABGGTA
MIF
TPGS2
PAIP2
PPP1R15A
KDM1A
MXD1
MED24
DCBLD2
DHPS
SRP54
DLG2
RIC8B
CDC25C
TMEM126B
TMCC2
CDKN1B
PMEPA1
PSMB7
CCDC171
SNX15
NPDC1
PMM1
KLHL20
RALY
RGMA
VPS28
ZNF793
TAX1BP3
EMC6
APH1A
ILF2
ZNF292
RAB5C
DEDD
HSPA4L
FZR1
NR4A1
GTSE1
CHMP5
BAG1
FDXR
SGPL1
SMARCAD1
POLD1
IER5L
NLGN1
REEP6
PCSK4
NUBP1
NDUFS2
SASS6
GPR158
MRPL48
NUP42
DNAJB12
PRRG2
NOSIP
PYCR3
RABEP2
CCZ1B
TP73
FLAD1
KIFBP
LSG1
OS9
COX16
EIF1AD
BANF1
LNPEP
UQCRQ
GDF9
KMT5A
RBMS2
LANCL2
PAMR1
MED17
DRG2
SLC36A4
CREB3L2
PRR14
ZNF181
SNRPA
C19orf54
PLK1
PRKAR1B
MAD1L1
VEZT
FGD6
USPL1
DKK1
MRPS23
SRRM1
MRPL3
WBP2
ZNF839
FNDC3B
COL17A1
ATR
SMARCB1
PCDHB13
FXR2
TCTN3
PSMD14
PJA2
GTF3C5
MYO9B
HAUS8
TRMT1
PSKH1
BTF3
SLC39A11
CHD6
MEA1
KLHDC3
NFYC
TMEM14B
BRF2
CARD8
COX5A
SPRING1
RNFT2
RNF44
PACSIN3
PDCD6
NRXN3
H2BC13
H2AC13
POLE3
C9orf43
YJU2
PLEKHG2
PHF14
DKKL1
DLGAP5
SLC35A5
ATG3
NOC3L
RRBP1
PUM3
PELATON
FKBP3
OGDH
SELENOT
HINT3
RPS3
ILVBL
RAB11A
TAF15
FOXO6
EVI5
SELENOF
HS2ST1
PRKDC
MCM4
DNAH5
TCTEX1D4
BTBD19
NOL8
CENPP
RPL23A
ZNF565
ZNF146
NUMB
TSPAN31
PLBD2
MECR
LONP1
CATSPERD
SDHB
USP42
C6orf132
ADPGK
RAB5A
EFHB
BAG6
MPDU1
LOC100996842
ELP3
NOP53
FNTB
ACBD4
PAX9