ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6750798 | MDA-MB-231
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◣ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
FAM227A
CBY1
MTF2
SPATC1L
CGRRF1
CYP4F11
EEF1A1
ZFAND3
NTPCR
C12orf29
CBWD5
NUDT4B
SOX2
PRDM4
PPIL1
HGC6.3
CXCL3
SPAG1
NUDCD1
TTC12
CBWD3
CBWD6
ELMOD2
WDHD1
SOCS4
ADGRB3
SAYSD1
NBPF1
SRPK1
GNPTAB
NUDT4
TMEM14B
H2BC18
BIRC2
MOCS1
EBAG9
PPARD
TMEM217
TBC1D22B
KRCC1
RBM19
TMEM71
PHF20L1
CT45A10
EMC2
MSRB2
POLR2J3
NOTCH2NLA
GPAM
C6orf89
MTMR2
WASHC4
FANCL
RTRAF
ATL1
LMBRD1
MAP4K5
STARD4
ZSCAN30
NUF2
MTCH1
ZNF322
DENR
PCMTD2
AARD
HCFC2
GLT8D2
TRPS1
TAP2
FBXO43
ARL14EP
MIER1
DNAI4
DAB1
TMEM260
SH3TC2
OMA1
LYSMD3
ZNF451
LOC389831
ZNF330
DDX10
SEC31A
THAP9
FANCE
ZNF311
TMEM30A
ANKRD46
GPR89A
FDXACB1
C11orf1
PSMD6
ATG14
ZSCAN31
SECISBP2
CDC7
FANK1
KIAA1586
MNAT1
TNFRSF11B
COLEC10
TBC1D7-LOC100130357
TBC1D7
CHST10
COMMD10
TCF7L2
MTHFD2L
EXOC5
AP5M1
SUPV3L1
GALC
LYRM9
FILIP1L
TTC29
CMTR1
GMNC
UTP20
HLA-DRB1
SLC35B3
SNRNP48
FRMD4B
GAGE2C
GAGE2B
GAGE2A
FAM200B
PIK3CA
CNIH1
JRKL
CCDC82
ZC2HC1C
ACYP1
NRAS
PLEKHH2
ACYP2
SESN3
STK38
ATG10
SCFD1
DDX1
KDM4D
CWC15
NAF1
ZNF391
SEC62
CR2
NAT10
ZNF202
DLG2
UTP23
TMEM126B
SMARCA5
EFHC1
LRRCC1
ZNF76
SIK2
ARFGEF2
C12orf75
SPATA7
TSEN15
KRTAP4-9
SERF1B
SERF1A
PCTP
LMCD1
FDX1
LRRC1
UBR2
HMGCS1
NEDD1
PRMT2
NAPG
ZNF184
FRA10AC1
TEX9
RPP30
GORAB
GLRA3
H2AC4
MFAP3
FAM114A2
MMUT
CENPQ
KRTAP3-3
SLC35C2
MRPL27
EME1
CTTNBP2NL
MAPK14
HSD17B12
PAK1IP1
C6orf52
GFPT1
TRIM44
FBXL5
ZBED8
SLC30A9
CCDC167
RPUSD4
FAM118B
RNF38
COMMD8
SMC6
GEN1
DPH5
TAF4B
C1orf53
NIPSNAP3A
RNF103
CPQ
CCDC88A
AFF1
RLF
DNMT1
MED20
BYSL
RABEP1
MTERF2
OSER1
RNF19A
GOSR2
CD83
PTGS2
RABGGTB
OXR1
UBE2D1
PRKN
PACRG
OXNAD1
DPH3
CRADD
FBXO48
APLF
WDR48
SCN11A
FRMD6
HPS5
GTF2H1
ISOC1
NME6
RTKN2
SNX13
COPRS
HACL1
BTD
ZFP69B
TTC32
KIAA1109
ACTR5
LSM6
AREG
MLH3
USP53
PTP4A1
EXT1
KCTD20
MTREX
DHX29
PAQR3
TCTE3
ERMARD
GRPEL2
PXT1
DSN1
SCYL2
DEPDC4
KIF2A
VSTM5
TEX10
PRRC1
MAML2
GBE1
GMNN
PGBD2
STX7
KIFAP3
CEP126
BAG2
TP53RK
CAST
CCN3
OARD1
NFYA
ZSCAN16
PANX1
RBM7
C11orf71
SHPRH
SNX2
FERMT2
UFL1
MAPKAP1
SGCB
CLASP2
BOD1
IL15
PPP1R12A
NDST3
SUPT3H
MOCS2
EEF1E1
EXOSC9
MED23
SRP9
KRTAP2-3
SRSF11
MINPP1
METTL15
KIF18A
PDE4DIP
PTGFR
GPR89B
SARS1
SCLT1
C4orf33
RPE
MAST4
GMFB
SRBD1
SNRPB2
CRY2
KIF5B
H2BC17
H2AC17
REXO2
RAB4A
PRKCI
BMS1
CEP120
SERINC3
FAM91A1
ECI2
STK4
ACBD6
TCAIM
C6orf226
CENPC
CEP135
ZSCAN9
TMF1
CHML
OPN3
STAMBP
FZD6
SNRPF
GPSM2
TDP2
ACOT13
TOMM20L
UQCRFS1
TECPR2
CINP
NAA30
PPFIA4
OAZ2
MYO1B
MRPL42
CLK4
DNAJC19
PHLDA1
AP3B1
EDEM2
P3H2
FARSB
STX17
KCTD8
DEPDC1
DEF6
DPY19L3
NOL10
BLOC1S1
C10orf88
MITF
L2HGDH
DMAC2L
SDHAF4
RNLS
ZPR1
PPP1R3D
FAM217B
ZCCHC4
RPP21
AKIRIN1
CSNK2A1
TEFM
ANTXR2
FIP1L1
POFUT1
PLAGL2
BCL10
CC2D2B
CHMP2B
LRRC37A3
TMEM154
CCDC86
TTC17
NDUFAF2
ERCC8
PARVA
KCNN2
PACRGL
SC5D
MAPK8
CSRP2
MAPK1IP1L
ELAPOR2
SIPA1L1
SUCO
MKRN2
PIP4P2
C18orf21
BBS12
MTBP
MRPL13
CCNH
SUCLG2
ZNF691
RCBTB2
ZC3H13
ADGB
PAG1
AMACR
IFT57
INO80C
CEP295
GCH1
UQCRB
SLC25A46
VAMP3
CFAP58
CDKL1
PDCD6IP
VPS54
SYBU
SEL1L
VPS8
H2AC11
H2BC11
CDCA7L
PABPC4L
B4GALT5
DCAF8
MOCS3
DPM1
MFSD2A
ZNF35
MRPL2
KLC4
RFX3
EIF2S1
ATP6V1D
TMTC3
CEP290
IQSEC3
MTOR
AMZ2
SLC25A27
CYP39A1
OGFRL1
RNF180
PAQR8
HTATIP2
DCUN1D5
FAM151B
CD302
TBC1D5
KRTAP9-2
NCEH1
FOCAD
MMS22L
ZSCAN23
SS18
STX18
DPH6
MYLIP
TFAM
MCUR1
CRY1
LRRC6
NCSTN
COPA
GXYLT2
FAM174A
FIGN
EXPH5
LNPEP
THAP6
RAB33B
CLDN1
DCK
CUL1
CHD6
TESK2
TNFAIP8
USP49
RAD21
OTUD6B
NUP54
SPTLC1
MED30
RALGAPB
CAPZA1
E2F6
BPHL
POLR1H
MRE11
ANKRD49
PRPF38B
ZNF829
ZNF568
ST7L
KHDC1
EPS15L1
WDR37
MSANTD4
DISP1
ANKS1B
DYNC2H1
UNC13B
FOXO3B
KRTAP2-4
C6orf118
FAM102B
SVBP
ERMAP
MED10
EFR3A
RAB28
LCORL
RPP14
HTD2
APPL2
GOLGA5
DDHD1
DEK
LZTFL1
ALKBH3
TICAM2
MAL2
ZFPM2
HMGCLL1
NDUFV2
SCARB1
ANGEL1
CRBN
NFRKB
NEK11
ASTE1
DST
PHF3
NCOA5
LRP12
NAP1L1
INPP4B
THOC3
TTLL7
TMED8
SAMD15
BTBD9
PLRG1
TMEM14A
TMEM263
PLPP1
MMAA
PRMT6
POMP
HMGB1
E2F7
USPL1
CCDC50
CCNG1
SH3GLB1
PSMG2
CEP76
VRK2
SMAP2
ANTXR1
TRMT5
SLC38A6
UTS2B
SLC25A4
SEC13
RASAL2
PELI1
ZBTB18
KAT7
USP6NL
PNPLA8
OAZ3
MRPL9
RBM12
CPNE1
TMEM45A
LOC100287896
LIPT2
CXCL2
PELI2
TMEM74
PTS
MAEL
ILDR2
ALMS1
ZKSCAN8
NME7
BLZF1
VCPKMT
PTPDC1
PAFAH2
ALG8
PPP1R42
MYL12B
DNAH6
NTAQ1
ITPR1
CHMP4C
RGL1
L3HYPDH
JKAMP
ACADM
PHTF1
SMC5
TIGD6
HMGXB3
ARG2
GABRB3
SPAG16
OXSM
NGLY1
GNG12
RFX6
STPG2
NREP
SVOP
DPYD
FAM3C
ATAD2B
COQ2
COX10
ERAP1
KIF6
ERBB2
VAPB
RIC8B
ZNF124
PGAP3
RPL22L1
NOTCH2
TTC4
SNRK
DR1
ATP5F1E
CDC73
TIMM10B
ARFIP2
RFESD
PIGF
CRIPT
ZSCAN26
TCTN2
MKLN1
NPL
SAMD12
ZNF133
IQCH
AAGAB
DUSP12
VPS37A
CNOT7
NUDCD2
HMMR
NBN
GLO1
TTC33
IFT81
TMX1
FBXO4
LONRF2
SAV1
ATP6V1C1
H2BC14
H2AC14
SLC41A2
EIF1B
CFAP43
BDP1
MTRNR2L8
NUP160
PPME1
C2CD3
ZNF491
SELENOK
CTNNB1
CNPY3
EIF2D
USP47
LRRC8B
PRKAR1A
ASCC3
MIPOL1
ZW10
PPWD1
CENPK
PPP1R21
ARL6
ELMO2
SH3RF2
AGBL3
GPATCH2L
H2BC4
H2AC6
UBA6
RAB35
CSE1L
VPS37B
SDC4
SMIM15
ARPC5
SNF8
RNF2
ALDH2
RGP1
GBA2
JPT1
MIA3
TDG
MYEF2
CTXN2
SCAND1
MSMO1
PRICKLE2
CMTR2
ANKRD17
UBXN2B
CCDC15
UGGT2
RAD18
CTSC
CEP83
ROR1
SMCO4
PCLO
GNL2
SNX7
ANKRD50
RWDD1
ING3
NDUFAF4
KLHL32
EPB41
CHMP3
RNF141
NEK4
MAK
LRRFIP2
EPM2A
BOD1L1
APTX
EML5
DNAJA1
NEGR1
PSMD9
HPD
KDM3A
H3C1
COX18
TMEM192
IKZF5
CDK17
ACADSB
AP3S1
HSD17B7
H4C1
ZNF596
UQCC2
NEK7
ALDH18A1
TIGD4
ARFIP1
SEC22B
ADH5
SEC61G
ZNF134
SNAPIN
RFX1
GRAMD2B
MEA1
KLHDC3
TNPO1
SRSF6
ARHGAP19
PEX3
ADAT2
ZNF587
BIRC3
TP53BP2
MRFAP1L1
EXOC6B
HSF2
PSMF1
GCLM
TXNDC16
GPR137C
RBM18
MRRF
OR1F12
PIGC
ZC3H12C
IL6ST
SLC35D1
PDHX
JHY
APIP
TEX2
PLD1
ARFGEF3
GEM
EBPL
LAYN
FOXN3
PPP1R2
RUNX1T1
C12orf73
NUP93
KIAA0319
RGS2
ZCWPW2
AZI2
CPEB4
RBKS
BABAM2
ARMC4
XKR9
SREK1
LACTB2
SPATA1
GNG5
NCOR1
TRDMT1
SCOC
API5
SETMAR
CDCA4
DNAH14
BTF3
TOMM34
CFL2
TDP1
DHRS4
TCTN1
CTSO
CLOCK
OSCP1
SAMHD1
TEAD1
TEP1
FAM120B
GOLGB1
TSPAN19
LRRIQ1
PRPF19
RBM41
SYNRG
ARRDC3
RNF145
FAM13C
RBFOX2
FBXO38
TUBE1
FAM229B
PAM
C5orf51
ZNF562
CCDC59
PLPP3
TMED7-TICAM2
TMED7
CPE
DIAPH1
CNTN5
KRTAP2-1
FOXJ3
HDDC2
GOLGA1
HTR7
NET1
SNX5
MGME1
EEA1
CABCOCO1
XPR1
SMIM8
TCP11L2
RANBP17
NOL11
BROX
AIDA
ZNF112
GREM2
ATP10D
KNTC1
INTS12
GSTCD
FNIP2
CBLB
PCNX4
UBP1
MRPS18B
ALG9
NHLRC2
DCLRE1A
CHUK
HOMER1
ZNF717
HFM1
COL19A1
PELO
ITGA1
MPHOSPH6
RNF144B
OSBPL8
UBL3
SUSD5
TGFBR3
LRRC8C
BRD4
TIAL1
ZNF318
PRKDC
MCM4
ACOX3
SELENOH
SP2
LAMA4
ZNF66
NRXN3
ZNF799
WDR41
TRIQK
PSMA5
SUSD6
FAM8A1
FER
BMP2K
AOPEP
PRKAB1
BSN
N6AMT1
KTN1
ZSWIM7
YWHAB
TTC19
RPL10A
MACIR
GCNT1
POLB
MAP2
NLGN1
USP30
FANCF
PARPBP
NUP37
AARS2
PGM1
FBXW2
MFSD14A
H1-4
MGAT4A
IPO13
ZDHHC6
VTI1A
ZNF772
ZKSCAN4
PTDSS1
MTERF3
SDHAF2
CPSF7
PLEKHA1
ZNF699
NMT2
TBC1D31
RABGAP1L
RUFY1
E2F3
SLC36A4
SDE2
PPP1R11
H2BC13
H2AC13
SLC25A21
TMED10
DNAJC9
ARHGEF12
SIAH1
TOMM6
BTN2A2
PARG
PIGU
DAAM2
ZNF397
KHDC4