ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5771668 | N2102Ep
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◣ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRG1
REST
FLAD1
SFRP2
SOX6
TIMP4
ZNF343
SNRPN
METTL11B
DNMT3B
VENTX
MED12
GDF3
FBP1
PIPOX
WFDC8
HESX1
TDGF1
GIMAP5
SACS
LIN28B
PRICKLE1
PSMD9
HPD
C22orf39
ETV1
FGD4
ESRP1
AK4
FBXO40
UGT1A6
CNGA1
USP44
GSN
LIN28A
PCDHB8
FZD2
PCDHGC4
PITPNM2
DNMBP
GEMIN7
FGFR2
DPPA4
ZNF318
CDC14B
TCHP
NDST1
ADAMTS16
TBC1D16
IER5L
PPP1R16B
OBI1
PCDHB13
ACCS
KCNMB2
HDAC9
SPIC
PLEKHA5
KCNIP4
KRT8
CNR2
MBOAT2
KIAA1522
LRRTM4
PWWP3A
CNPY1
NADK
METTL7A
CCDC169-SOHLH2
CCDC169
SYNPO2
CAAP1
PDCL
ZFYVE1
IFIT3
KLHL4
AUH
GSPT2
DHX32
MACROH2A1
LYPD1
KLF17
SLFN12
MTF2
F11
GADD45G
CCL2
DUSP12
SASH1
RIF1
WDR49
CCDC92
SOX15
SYTL2
ETV4
CCDC167
GRAMD2B
PBDC1
CFLAR
ZNF649
TINAGL1
PRRC2B
PDPN
KLHL5
MS4A12
PPP1R18
SMAD3
CCDC172
SHF
ZNF202
SRRM4
PMEPA1
CER1
TRPM3
HOXB1
DCLK1
KRTAP3-1
BEST3
C1R
MSH6
RASAL2
SERPINB6
ACSL1
IFRD1
EPB41L1
EFCAB8
ZSCAN12
ZNF532
ANK2
SGMS2
SUCLA2
KMT2B
RGSL1
RIMBP2
CDH10
IL23A
SPAG9
TMEM220
LPCAT4
FAM153B
BCAT1
MRGPRX3
KLF5
MAP2K5
CCN2
SLC10A2
JAG1
STMN1
SNX16
VOPP1
WBP1L
ST18
SOX5
TSGA10IP
ACSBG2
SLC2A14
ADA2
TACC2
RIPOR3
SFT2D3
LMAN2L
WNT5B
SLC2A11
USP48
PLAGL1
MANSC1
IL20
DERA
TMCC1
OVCH1
VAPB
ARID5A
C16orf78
PCDHB5
AHCYL2
GALNT8
GJA1
DACT3
GCNT2
DCLRE1C
ZYG11A
FOXP1
GRM4
EGFR
SPATA12
TNFSF8
NEBL
ADGRA1
RNF213
RAP1A
DGLUCY
SLCO4C1
RGS3
TRIM22
ZSCAN10
AASDH
MTA2
RNF19A
PRDM14
ITPRIP
C1orf167
MYOM1
ERICH3
TRIM54
ETV6
LIFR
HLCS
MRPS15
LRRTM3
SLC35G4
TTC39B
CNBP
EXOSC4
S100A16
ZCCHC12
DST
UTS2
STOX2
ABCB8
NLGN1
HLTF
NODAL
RFX4
SP5
RIMKLB
RND1
TJP2
OLIG3
CLCF1
MFSD6
HMGCL
SLC16A8
RAB34
GLUL
DDX31
SET
GREB1
FGF1
THEM4
MB21D2
PLD2
PBLD
HNRNPH3
EIF4E3
PROM1
CAMTA1
KMT5C
RBPJ
TBC1D9
CTBP2
CCT2
DHRS3
MDK
ODF2
FMN1
SERPINF1
INSYN2B
ETV5
GRK6
IGF1
PBX1
CLEC9A
RASSF8
C22orf31
KLF7
DPP4
CNKSR3
ZNF469
ZNF747
FOXH1
CD200
AKIRIN1
CTIF
LOC105372977
CDH6
MGRN1
ERMN
SLC35G3
RNF44
RBM47
DDX3X
VANGL2
CORO6
TAL1
SCNN1A
LTBR
MEIG1
LOC107986453
CAD
ARL5C
IL1RAPL1
MX1
DAGLB
OLAH
IFNK
APH1A
CPN2
WDR41
FILIP1L
TMEM114
ALDH7A1
ADGRL2
RNASEL
PSAP
SMARCA2
DAB2IP
LPP
SLC11A2
CCDC171
PRKAG2
PIK3R3
TSTD2
NCBP1
PCDHA11
ABCF3
LYRM2
CYTH2
BRINP2
GRHL2
FAM227A
CBY1
PLPP2
CEP41
RFFL
ITGB8
RAD23B
GOT1L1
GLRX2
HES5
NFE2
ZNF254
CTNND2
ESR1
DPPA2
CAMKV
SORBS2
TBC1D8
ANKDD1B
GRIN3A
NANOG
TRAK1
PHLDB2
KIFBP
DAOA
PCDHB1
YWHAQ
TUBB
SRPK2
ADD2
UTRN
SPTBN1
MMP10
RHOBTB2
TFAP2A
PCDH18
RFC5
CDHR3
C7orf33
ZNF611
EGR2
IL17RD
LLGL1
CLCN5
ATP2B4
GALR1
ARSD
LDB1
CEP164
ADAMTSL1
PAG1
ATAD2
ARHGAP18
ATOH1
SRC
RBMX
SALL2
SPPL2B
LSM7
LEMD2
JAK1
CCR7
ST6GAL1
RNF43
KLHL12
KCTD6
PKDCC
MMEL1
PCYT1B
PSKH2
AHCYL1
AMOTL2
PRPF38A
ORC1
KIFC3
PPM1H
CELSR3
GADD45A
ERGIC2
FAT1
RGMB
FAM3A
HMGB1
ACVR1
FAM162B
BFSP1
PAIP2
MCTS1
CPA5
STAU1
TMEM202
TENM2
CEP63
ANAPC13
INKA2
PIM1
KCNAB1
SYBU
KATNAL2
PIAS2
ZFHX2
DNAI2
SLC35G5
GRHL3
H4C4
TMEM184B
APOBEC2
PYDC5
IFI16
ALPK3
CCDC124
XK
MYH2
ZFC3H1
THAP2
TCF21
CPVL
GLIPR1L2
CCDC50
SLC25A26
CD300LB
IGDCC3
TGM6
TNRC18
PDE4D
S100A2
SPHK2
NSMCE4A
INAVA
BCL9
USP53
GRAP
NRARP
SEPTIN9
FNDC11
BAMBI
H2AC16
TMEM154
IL5RA
ZNF763
PLEKHG1
QPRT
DACH2
TECTA
RBBP9
ENGASE
FBXL19
SHROOM3
HAS3
SLCO5A1
ZSCAN18
SCGB1D2
MAP4
LPAR2
EID3
SEMG1
MAGEB4
TLE3
ABCA1
NRK
CARHSP1
PLCH1
FASTKD1
ACSBG1
EIF4B
LEPROT
LEPR
TPD52
VEZT
FGD6
RUNX1T1
ARHGEF10L
ATPAF1
UACA
GAB2
CCDC192
NUBP1
ZBED9
RHD
FAM120B
SEC31B
EBF1
LGI1
LBX2
DSE
TSPYL4
RMND1
GFOD1
C1orf100
LASP1
LRRC10
HELLS
PPARGC1A
ELOVL5
EIF4G1
MGAM2
PSORS1C2
ZNF101
B3GALT5
KDELR2
NUP160
CNP
CYP4F11
THOC5
ZBTB38
MATR3
MEF2C
ZHX3
DDX20
C1RL
DLX5
ANP32B
KMT2A
MSC
PRMT9
ZBTB45
ZNF195
MANEAL
LDHD
EFHD1
RBP1
MTA3
KCNG3
PRMT8
RP9
PDP1
LMO4
CALCRL
ZSCAN20
DCAF10
FUT8
CCDC130
CPSF4L
ST7
NIN
ING1
DLG3
GALNT14
PTPRG
PRRC2A
SYT1
SH2B3
C20orf96
ZNF140
ARID1B
CCND1
CLUL1
MSL2
GSTA1
CAPRIN1
PDCD2
DNA2
MYNN
USP39
C2orf68
PCDH12
TLX3
PTMA
SLC25A24
PTK2
CPSF6
WDR72
PXMP4
CNN3
PHACTR4
WNT3
FOXO6
NASP
ALPL
ATP11C
RAD54B
FSBP
GJC1
ZNF3
FANK1
ZNF416
MYEF2
CTXN2
NINJ2
ITPR3
ARID2
NRCAM
DISP3
ETFB
TTI2
MAT2B
SLC17A6
PES1
TCN2
XPC
LSM3
C2CD5
TSKU
CCNE2
MOB4
NEDD9
CYRIB
ZNF724
GSTO1
PUM2
DCX
ARNTL2
NTS
NOL4
NOVA1
MICAL2
LPAR6
FBLIM1
MYO7A
RTL8B
MTMR1
HECW2
CLK4
UNG
PLEKHG5
PPP1R12C
LIMS1
EPB41L5
MYL6
RBM22
DNAAF2
ST8SIA4
FNTA
ZNF506
SLC3A2
RHCE
SPAG4
FAM169A
ACOT7
TCF4
ALDH3A2
RPL5
CDKL4
CDKL5
FASTKD2
NDP
TUT1
OGT
PINK1
NHSL2
TNC
TOMM40
C6orf132
TUBA1A
DPP9
TBX22
CCNG2
ZFAND6
ZFP36L1
NAB2
NDUFS5
TSPAN19
LRRIQ1
IGSF9
ENOX2
TDRP
ZFP64
DLAT
HSH2D
SERPINB4
SCG3
YTHDF2
SERPINB10
ANO4
PIK3CA
ZNF358
NRL
DCAF11
RUFY1
TCTEX1D4
BTBD19
SLC9A9
PACSIN2
HSDL2
MAPRE1
AACS
DCDC2
FBXO11
SMARCC2
IFNAR2
KANSL1L
SLAIN2
DGCR8
KDM3A
SLC7A11
ARNT
NCAPD2
IL15
MRPL51
SLCO1C1
ZNF281
BMPR2
MAN2C1
ADAMTS6
SCAMP4
ADAT3
TGFB3
SP8
CYLD
TRDMT1
C7orf65
HIP1
PITX2
RNF10
DOP1A
ANXA5
CELF3
ZBTB8OS
RBBP4
STRA6
SRP14
RADIL
SMTN
FGFRL1
CBR3
KIAA1109
PRSS47
CENPH
RAC1
C2CD4A
HHLA2
LMF2
MOGAT2
ACTR3
MPZL2
PTPRB
ADAMTS7
RNF122
HSPA6
CREB5
PIMREG
ZSWIM4
WFDC6
SLC2A7
ZCCHC18
TEN1
ACOX1
LPAR4
ARHGEF37
H4C3
TBX6
LCOR
EIF1AX
TCF7L2
FN1
DNMT3A
GLTP
ZNF34
TLE2
RASL12
FOXD3
ADM5
CALD1
ACOT2
NAALAD2
DUSP1
TCL1B
BEND5
SFXN3
PROX1
PDZD7
MEI4
RBBP6
ABLIM1
EPHB1
CUL4B
TOM1L1
TESK2
EGR3
ZNF37A
RGS5
PALB2
DCTN5
UMOD
LIMS4
GOLGA6L7
NDUFB5
MRPL47
SYNCRIP
RNASEH1
NAT16
PIH1D1
SLC25A14
CFAP20
GPSM2
EFS
E2F7
RSPH14
AGO2
UNC5D
CCDC77
MAP7D1
TRAPPC3
MED15
PSMA1
OC90
DEFB121
XKR8
ZNF737
OLFM2
ZNF587
THSD7A
ZNF85
HSPH1
ISL2
FAM110A
SPEG
GKN2
SMIM10L2A
CAVIN3
SLC4A2
CDK5
PLEKHG2
EVI5
GRB7
LRRC23
SLC39A1
ZNF589
SLFN13
NGFR
API5
NOTCH3
HIP1R
AP2S1
DBR1
PWWP2A
NCLN
WBP1
DIPK1A
PGAM1
TLR4
ADAR
CAPN13
RPS24
H2AC15
H2BC15
ADAMTS9
ZNF730
TNFAIP6
KLF15
FUT10
MAGI1
ANKS1B
PARP2
WDR43
LUC7L2
FMC1-LUC7L2
FMC1
FRRS1L
SERPINB3
CHD6
DNAH12
TAGLN2
ETFBKMT
ZNF14
PSME3IP1
ZNRF1
GBF1
ST8SIA1
PIP4K2C
PHB2
TACC1
FUZ
NOTCH1
DDX17
ZSCAN2
PHF5A
ACO2
MTRNR2L8
MTRNR2L2
IQCH
AAGAB
HGS
ARL16
GPSM3
ZNF775
MCCC1
EEF1A1
ARIH1
WDFY2
TES
KDM2A
ZNF304
GET3
PGK1
SPRY4
SINHCAF
SNAPC3
H3-3B
UFD1
CDC45
RTBDN
PDIA4
SIX2
SLC7A5
SRSF7
SLC33A1
KCNN2
OSBPL1A
SLC25A36
MSANTD4
DICER1
MARCKS
CFL1
WDR36
ZSCAN9
SLC16A13
TMUB2
VASH2
WDR74
ZNF428
OGA
PALM2AKAP2
TRMT2A
RANBP1
UBQLN4
POLB
DHX8
DPP3
LAMTOR2
CD2BP2
LINGO1
HMGN1
ANAPC15
CSRNP2
PIN4
KNTC1
SH3GL3
ESRRA
CP
TIAL1
PIF1
CHN2
EMC9
OAZ2
SLC25A11
RNF167
ARHGAP42
YLPM1
PPME1
C2CD3
WASF1
CDC40
CEP170
KLHL24
SDCCAG8
G3BP1
RAB30
EMSY
CTTNBP2NL
F11R
JUP
ZFAND3
SFPQ
GOLGB1
ZNF627
BORCS6
H4C15
H4C14
FAM181A
LIMCH1
ITGB1
ZDHHC5
STK32C
LRRC27
ZBTB40
YEATS2
EP300
TMEFF1
KIAA0895L
HEXIM2
SAXO1
RRAGA
ADRM1
ATAT1
POLDIP3
HNRNPDL
NSA2
GFM2
C1orf127
CCDC88A