ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX277134 | T.T
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◣ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
FAM227A
CBY1
NOTCH1
SINHCAF
HMGB1
PLPP2
KDM2A
FUZ
NDST1
MTF2
NDUFB5
MRPL47
DNM1L
PTMA
ANKRD65
ZSCAN2
DPP3
ARIH1
CLCF1
FGF19
ESRP1
KMT2B
WDFY2
ARID2
PHF5A
ACO2
MTDH
MCCC1
ISL2
TINAGL1
MYL12A
SPINT1
FBXL19
LYPD1
TGIF1
F11R
CNP
DISP3
JUP
SIX2
ZNF775
KCNN2
IQCH
AAGAB
DDX17
ASMTL
ALDH7A1
VASH2
SH3GL3
GLI2
OLFML3
CHD6
HIPK1
KLF7
TCF12
ERGIC2
DST
TIA1
CYTH2
OAZ2
HNRNPDL
ENOPH1
NDUFS5
CCT2
CEP41
SLC16A13
ZNF428
FKBP7
IFRD1
POLR3E
ETV1
CPNE2
NUP160
EP300
CUEDC1
CFL1
GRK6
YWHAZ
TTF2
CAPRIN1
ESRRA
PELATON
H3-3B
KLK6
SOX6
C11orf58
PMEPA1
ZFC3H1
THAP2
SPHK1
ACTR1A
POLB
SLC4A7
KIF26B
ZNF268
PDIA4
HNRNPC
ZSCAN9
SYNCRIP
PIMREG
RHOBTB2
TIAL1
NPIPB12
AHNAK2
ZFAND3
ZNF506
C6orf132
BCAS2
ETNK1
RSF1
AAMDC
GPR39
VAMP5
SLC2A4
SLC33A1
TNRC18
ITGB1
ATAT1
LPIN1
TJP2
ST8SIA1
PDP1
EXOC5
AP5M1
FBRS
NPIPB5
ZNF195
FXR1
SLC25A36
SRSF7
NASP
UBTD2
ACOT1
EFNA1
TENT5C
DMRTA2
TTC13
KNTC1
CNIH4
SOX2
PIN4
TNFRSF21
EXOSC2
IVNS1ABP
TRIB1
RTBDN
EIF1AX
CHD1L
PRKAB2
EMC9
EIF4A2
PRDM2
MEF2C
ID1
NPIPB8
MYL12B
WDR36
S100A16
TMCC1
ZNF627
DHRS3
HMGN1
ZNF37A
ZDHHC5
UBR2
CEP63
ANAPC13
FOXO6
SNX16
TBC1D31
ADRM1
LSG1
RASAL2
CSRNP2
PGBD2
EBAG9
CLDN4
GDF5
CEP250
TOP1
GSN
HSPH1
PPP1R2
CSDE1
FAM83B
RAPGEFL1
PRORP
PPP2R3C
KDM3A
ZBTB6
GPSM3
H4C15
H4C14
C15orf40
TES
ZNF2
RBBP6
LNX1
FMNL3
NCOA4
ST6GAL1
HEXIM2
G3BP2
NFE2L2
ETFRF1
CFAP94
PTPN12
DGLUCY
NEBL
TEX9
RFX7
MARCKS
RRBP1
NWD1
RABEP2
TLX3
C2CD5
ETFBKMT
PSME3IP1
RSPRY1
GPR158
SPAG4
GADD45A
SRSF6
CCND1
ZNF806
ADAR
KRT6A
POU2F1
MCM7
AP4M1
RAPGEF5
C15orf62
SPRY4
MSANTD4
CCDC88A
HLTF
TAX1BP3
EMC6
ZNF84
RIOX1
PDE4D
MAP3K9
CREM
EXD1
CHP1
DCLRE1B
AP4B1
MTRNR2L8
OGA
S100A4
TOMM40
GTF2H4
TSPAN13
DDX5
RPS6KB2
CD55
NPIPB3
PNN
GET3
ZNF763
TUT7
WDR33
ZSWIM4
SNAPC3
ARF4
PSMB7
ZNF669
PIF1
SPATA12
GGPS1
ARID4B
MTA3
KCNG3
ZNF433
KMT5B
CA5B
KMT5A
PTPRH
SLC25A21
ZBTB26
SLC25A45
CFAP20
NR1D1
M6PR
KLRG1
THAP10
LRRC49
TMEM249
DCBLD2
BORCS6
LDHB
RTN4
SF3B5
PTGES2
ZNF140
TNPO1
YLPM1
IFT27
STAG3
GPC2
VPS50
HEPACAM2
EEF1AKNMT
DKK3
TNFAIP8
RMND5A
RNF103-CHMP3
SPRING1
RNFT2
ANKRD12
BRMS1L
SLCO1A2
PARP2
BTG1
LNPEP
KIAA0895L
LTO1
ZNF720
ABHD2
LARS1
CTXN3
LAMC2
REST
SACS
PIPOX
METTL11B
DNMBP
NRG1
HDAC9
SRRM4
OBI1
PRICKLE1
SNRPN
FLAD1
MED12
HESX1
TDGF1
VENTX
NADK
PSMD9
HPD
WFDC8
ZNF343
CELF3
FGD4
CER1
GADD45G
IER5L
DNMT3B
DAGLB
CNPY1
LIN28B
NANOG
FBP1
PPP1R16B
ETV4
MTRNR2L2
RIF1
GIMAP5
KIFBP
FBXO40
ITPRIP
FZD2
HGS
ARL16
BFSP1
CCDC169-SOHLH2
CCDC169
LRRTM3
PDPN
USP44
ZNF532
SPIC
WBP1L
FGFR2
PDCL
CDC14B
TUBB
DHX32
EEF1A1
SLC2A14
GDF3
RFX4
LRRTM4
SFRP2
TIMP4
ADA2
DDX3X
CARHSP1
FOXP1
ZNF304
SASH1
PGK1
AK4
CAMTA1
DUSP12
WDR49
PLEKHG1
AHCYL2
TNC
FAM120B
TBC1D16
ACVR1
UGT1A6
C20orf96
UFD1
CDC45
MACROH2A1
WNT5B
ANK2
VANGL2
ST18
PXMP4
SLC7A5
AASDH
SGMS2
AUH
VOPP1
PITPNM2
OSBPL1A
DPPA4
SLFN12
CCDC92
CCN2
DICER1
PRRC2B
NRCAM
TESK2
GCNT2
TMUB2
CDH10
WDR74
CFLAR
EPB41L1
SHF
PIK3R3
BRINP2
PALM2AKAP2
KRTAP3-1
ETV6
STMN1
TRMT2A
RANBP1
ADAMTS16
KLF5
DACT3
UBQLN4
F11
CELSR3
CNGA1
CTNND2
RGS3
DHX8
KCNIP4
TACC2
ACSL1
LAMTOR2
CD2BP2
LINGO1
HES5
ANAPC15
ZBTB45
ZNF202
ERMN
MBOAT2
HOXB1
CP
SLCO5A1
PLCH1
C22orf39
SMAD3
VEZT
FGD6
TRDMT1
CD200
LLGL1
CHN2
GEMIN7
LIN28A
TUT1
SLC25A11
RNF167
DCLK1
ARHGAP42
PPME1
C2CD3
WASF1
CDC40
CEP170
PPP1R18
KLHL24
SDCCAG8
FAM153B
G3BP1
CCL2
SLC10A2
NEDD9
RNF213
RAB30
TCHP
ARID5A
EMSY
CNR2
CAAP1
CTTNBP2NL
SFPQ
SP5
RAD54B
PLAGL1
ZFYVE1
GOLGB1
SET
FAM181A
LIMCH1
ETFB
STK32C
LRRC27
KRT8
IFIT3
ZBTB40
YEATS2
EGR3
CCDC167
TMEFF1
PES1
PCYT1B
THEM4
SAXO1
RRAGA
PWWP2A
AKIRIN1
IL17RD
ACCS
RNF19A
TRPM3
PCDHB8
E2F7
POLDIP3
MDK
ZBTB8OS
RBBP4
C1R
FSBP
NSA2
GFM2
C1orf127
ZNF318
TSNAXIP1
RANBP10
JAG1
IL23A
SMIM14
MOSPD3
HSPA13
MANSC1
TCN2
IPO11
HBP1
DTNA
NKIRAS1
RPL27
FAT1
ABCB8
GXYLT2
CNN3
ZCCHC12
GSPT2
SENP8
MYO9A
SYNPO2
LPCAT4
TRIM22
ZNF358
YWHAQ
CNKSR3
AFF1
JPT1
SLC2A11
SPAG9
ZNF469
RGPD2
RGPD1
OARD1
NFYA
TRAK2
STRADB
PCDHB5
STOX2
SYTL2
AKAP9
LCOR
RNF43
PELI1
ADNP
ESR1
TCF4
NFE2
BBS7
WBP11
C12orf60
MMACHC
H2AZ2
CCDC163
CPVL
TSGA10IP
UQCRQ
GDF9
SPHK2
IP6K2
CDK5R1
FILIP1L
ABAT
LPP
GALNT8
CLEC9A
HACL1
BTD
AMOTL2
GFRA1
ZNF106
HIP1R
VGF
INKA2
CDK12
DLG2
SLCO4C1
PKNOX2
KLHL4
SIRT4
TMPRSS7
MMP10
RSPH14
DLX5
ERBB2
CALD1
HEBP2
CCDC130
TFDP2
PRM3
SCOC
ZNF254
PER2
RASSF8
SYBU
ZNF649
PTCD2
MRPS27
ZCCHC8
ZCCHC14
METTL7A
RIMBP2
ZNF608
SMARCB1
SOX5
MAP2K5
PCDHGC4
INSM1
PBLD
HNRNPH3
RCOR1
PCDHB13
RFFL
PAIP2
BLOC1S4
ARHGEF37
DERA
SUCLA2
GRHL2
PTGS1
PYDC5
IFI16
EGFR
KLHL5
KLF17
IREB2
ELOVL5
TLE3
DPPA2
PRR5L
SDHD
TBC1D17
AKT1S1
PROM1
ATAD2
DNM2
INTS9
HMBOX1
AFAP1
RIMKLB
ZBTB18
BCL9
CCNG2
SNX27
RBMX
PAG1
HNRNPUL1
YWHAG
PDE4B
CCDC146
FAM220A
KIF21A
LOC389199
RPL15
IFTAP
MS4A12
HEXIM1
LTBP1
COPS7A
RAP1A
MIDN
USP53
TSPAN19
LRRIQ1
BTBD3
ZNF180
SHROOM3
NUFIP2
PACRGL
ZNF250
RAB34
PWWP3A
PNRC1
CHD8
BCAT1
CTH
CDH6
RBBP9
CHMP7
LDB1
RAB4B
PAXBP1
RABGAP1L
CALR3
C19orf44
HOXA9
KMT5C
SMARCA2
ZSCAN31
PHLDB2
MRPS30
FEM1A
ARHGAP24
FZD1
ADGRA1
SALL2
RGS12
C2CD4D
FAM76B
CEP57
H4C9
MAP1B
MRGPRX3
PTX3
TMX2
RTRAF
MED19
HES6
IPO4
SERPINB6
OR13C2
GBA
TBC1D10B
OLIG3
NARF
MYLPF
PEX11G
PLEKHA5
KIAA1522
ERV3-1-ZNF117
ERV3-1
PGM2L1
MAST4
NUP214
COX8A
ETFDH
C4orf46
ZSCAN10
OGT
BAZ2A
MAD2L1BP
GTPBP2
TMEM132A
IGFBP2
YIPF3
POLR1C
CYP4F11
KCNMB2
TSTD2
NCBP1
CCPG1
C15orf65
ARHGEF19
ZNF474
ACSBG2
GAS2L3
DDX31
TPCN1
IQCD
RPUSD4
FAM118B
SAPCD2
PBX1
CRISPLD1
XAB2
CITED2
ZBED5
SMC4
IFT80
DPP4
KANSL1L
GID4
ATPAF2
MTUS1
ZNF3
ZNF101
MEIG1
PQBP1
TIMM17B
NELFCD
VAPB
TCF20
TAL1
SLAIN1
KXD1
KCTD6
ITGB8
GOLPH3L
CCL26
GRIN3A
SLC4A2
NR2F1
CDK5
ANKRD6
MCTS1
FAM102A
CLIP1
RNF44
LIFR
SLC35G4
TCF7L2
IGF1
APH1A
ZNF273
PPP1R15A
RBP1
CPSF4L
MMRN1
CCAR1
RFX1
IGSF9
RND1
SRPRA
HNRNPL
FOXN3
PLEKHG2
PTPRZ1
CHMP4B
CCDC171
TBC1D9
NEMF
LYSMD3
USP54
MEGF9
CDK16
PRTFDC1
SEL1L
GPBP1
MAP2
NLGN1
QPRT
BPNT2
ZNF335
FNBP1L
CPA5
CD300LB
ZNF593
C1orf232
STAU2
ACTR2
GRAMD2B
NDUFS7
CCDC172
BSDC1
ILF2
ZNF292
GGH
RGSL1
CBX1
PRDM14
BMPR2
SCNN1A
ST7
ZBTB20
PRKRIP1
ZNF85
ZSCAN12
ABCB4
SPEM1
CLPB
ADD2
RBPJ
ZNF576
IRGQ
RAB5C
HIP1
TTC39B
DOCK9
APPL2
ZHX3
ZNF8
ZIK1
SPTBN1
LMAN2L
RAI14
DDX20
SEPTIN9
OXNAD1
DPH3
NTMT1
NODAL
ZSCAN18
WTAP
SOD2
UBE2T
SUFU
PTPRD
MTHFD1
TOMM40L
ERICH6B
SMC3
METTL9
DSE
ZNF277
DOCK4
CIAO2A
ABLIM1
TSPYL4
EIF3F
LRRC23
NEK2
INSYN2B
MAPK14
ZBTB38
REEP6
PCSK4
LDAH
DACH2
ICE1
ENOX2
NDUFB4
CDK5RAP2
LGR6
IGDCC3
XPC
LSM3
EID3
NCLN
KBTBD2
DYNLL1
NME7
BLZF1
SLC3A2
CLIC1
RBM47
VMP1
PTRH2
CENPA
KDELR2
ZNF548
FRRS1L
PIK3CA
NDE1
NFASC
CX3CL1
LMO4
ZNF737
FEZ2
ANK3
HLCS
RIPOR3
MYO1B
TTI2
TMEM220
EFCAB8
DCLRE1C
C16orf78
DDA1
MEA1
KLHDC3
UFSP2
INTS12
GSTCD
RAB11B
NUBP1
ING4
ZNF286A
WLS
GNA12