ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX968911 | iPSC derived neural cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◣ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

BFSP1
NRARP
ITPRIP
GXYLT2
IGFBP2
METTL11B
SACS
MTF2
CAMTA1
PGK1
FAM227A
CBY1
DDX17
PTPRZ1
FUZ
NOTCH1
DNMBP
GPSM3
DTNA
KDM2A
HDAC9
IQCH
AAGAB
WDR74
SIRT4
C17orf77
PRM3
TNRC18
NFASC
OSBPL1A
GLIPR1
CELF3
NDUFS5
FAM181A
SPHK1
FRRS1L
NDUFB5
MRPL47
MMP10
DICER1
ABCB4
PRDM12
CHN2
LCOR
ITPK1
POLDIP3
PTMA
C1orf127
GFRA1
SRRM4
SYTL2
EEF1A1
GAS2L3
ANKRD6
REST
SOX6
PIPOX
HMGB1
NRG1
OBI1
PRICKLE1
SNRPN
GRK6
FLAD1
PLPP2
IFRD1
GSN
MED12
HESX1
ETV1
TDGF1
VENTX
PMEPA1
NADK
PSMD9
HPD
WFDC8
ZNF343
FGD4
ZSCAN2
ARID2
CER1
PHF5A
ACO2
GADD45G
IER5L
DNMT3B
DAGLB
CNPY1
MTRNR2L8
LIN28B
NANOG
KMT2B
FBP1
PPP1R16B
ETV4
MTRNR2L2
CYTH2
ESRP1
FBXL19
RIF1
GIMAP5
KIFBP
TMCC1
FBXO40
FZD2
HGS
ARL16
ZFC3H1
CCDC169-SOHLH2
CCDC169
THAP2
LRRTM3
PDPN
CCT2
USP44
CEP41
ZNF532
SPIC
WBP1L
CAPRIN1
FGFR2
PDCL
CDC14B
TUBB
DHX32
ZNF775
DGLUCY
MCCC1
SLC2A14
GDF3
RFX4
LRRTM4
ARIH1
SFRP2
WDFY2
TIMP4
TES
ADA2
TJP2
DDX3X
NEBL
CARHSP1
FOXP1
ZNF304
GET3
DST
SASH1
AK4
SPRY4
SINHCAF
SNAPC3
DUSP12
WDR49
PLEKHG1
AHCYL2
H3-3B
TNC
TOMM40
FAM120B
TBC1D16
NDST1
ACVR1
UGT1A6
C20orf96
UFD1
CDC45
MACROH2A1
WNT5B
RTBDN
PDIA4
CHD6
ALDH7A1
ANK2
VANGL2
SIX2
ST18
PXMP4
SLC7A5
KDM3A
ZNF195
AASDH
SGMS2
AUH
SRSF7
VOPP1
SLC33A1
PITPNM2
KCNN2
SLC25A36
DPPA4
SLFN12
CCDC92
CCN2
MSANTD4
FOXO6
MARCKS
CFL1
KLF7
PRRC2B
NUP160
NRCAM
DISP3
WDR36
ZSCAN9
SLC16A13
TESK2
GCNT2
TMUB2
CDH10
VASH2
CFLAR
CFAP20
EPB41L1
ZNF428
SHF
PIK3R3
OGA
BRINP2
PALM2AKAP2
KRTAP3-1
ETV6
STMN1
TRMT2A
RANBP1
ADAMTS16
KLF5
DACT3
UBQLN4
F11
HSPH1
POLB
CELSR3
SYNCRIP
CNGA1
CTNND2
RGS3
DHX8
DPP3
KCNIP4
TACC2
ACSL1
LAMTOR2
RASAL2
CD2BP2
LINGO1
HES5
HMGN1
ANAPC15
ZBTB45
CSRNP2
PIN4
ZNF202
KNTC1
ERMN
MBOAT2
HOXB1
SH3GL3
ESRRA
GADD45A
CP
TIAL1
SLCO5A1
PLCH1
ISL2
PIF1
C22orf39
SMAD3
VEZT
FGD6
TRDMT1
CD200
LLGL1
GEMIN7
LIN28A
EMC9
TUT1
OAZ2
SLC25A11
RNF167
DCLK1
ARHGAP42
YLPM1
PPME1
C2CD3
WASF1
CDC40
CEP170
PPP1R18
KLHL24
SDCCAG8
FAM153B
G3BP1
CCL2
ZNF140
SLC10A2
NEDD9
RNF213
RAB30
TCHP
ARID5A
EMSY
CNR2
CAAP1
ST6GAL1
CTTNBP2NL
F11R
JUP
ZFAND3
SFPQ
SP5
SNX16
CEP63
ANAPC13
RAD54B
PLAGL1
ZFYVE1
GOLGB1
ZNF627
TLX3
BORCS6
H4C15
H4C14
SET
ZSWIM4
MEF2C
LIMCH1
ETFB
ITGB1
ZDHHC5
STK32C
LRRC27
KRT8
IFIT3
ZBTB40
DHRS3
LYPD1
ERGIC2
YEATS2
SPATA12
EGR3
CLCF1
EP300
CCDC167
TMEFF1
PES1
PCYT1B
KIAA0895L
HEXIM2
THEM4
SAXO1
RRAGA
PWWP2A
AKIRIN1
ADRM1
IL17RD
ACCS
RNF19A
ATAT1
TRPM3
PCDHB8
E2F7
MDK
ZBTB8OS
RBBP4
C1R
HNRNPDL
FSBP
CNP
NSA2
GFM2
ZNF318
CCDC88A
ADAR
TSNAXIP1
RANBP10
JAG1
HLTF
IL23A
ENOPH1
TIA1
SMIM14
ZNF37A
MOSPD3
HSPA13
ZBTB6
MANSC1
TCN2
IPO11
HBP1
NKIRAS1
ARF4
RPL27
FAT1
ABCB8
CNN3
ZCCHC12
GSPT2
SENP8
MYO9A
SYNPO2
LPCAT4
TRIM22
ZNF358
PSMB7
YWHAQ
RBBP6
CNKSR3
AFF1
ACTR1A
JPT1
SLC2A11
PDP1
SPAG9
ZNF469
RGPD2
RGPD1
OARD1
NFYA
TRAK2
STRADB
PCDHB5
SPAG4
PDE4D
STOX2
AKAP9
PIMREG
RNF43
EXOC5
AP5M1
PELI1
ADNP
ESR1
TCF4
GDF5
CEP250
NFE2
BBS7
WBP11
C12orf60
MMACHC
H2AZ2
CCDC163
CPVL
TSGA10IP
UQCRQ
GDF9
SPHK2
IP6K2
CDK5R1
FILIP1L
ABAT
LPP
GALNT8
CLEC9A
HACL1
BTD
ZNF763
RRBP1
AMOTL2
ZNF106
HIP1R
RSF1
AAMDC
VGF
TNFRSF21
PSME3IP1
INKA2
ID1
CDK12
DLG2
SLCO4C1
PKNOX2
KLHL4
POLR3E
TMPRSS7
RSPH14
RSPRY1
DLX5
ERBB2
CALD1
HEBP2
CCDC130
TFDP2
SCOC
ZNF254
PER2
ASMTL
RASSF8
SYBU
ZNF649
PTCD2
MRPS27
ZCCHC8
ZCCHC14
STAG3
GPC2
METTL7A
RIMBP2
ZNF608
SMARCB1
SOX5
NASP
MAP2K5
C11orf58
MAP3K9
PCDHGC4
INSM1
PBLD
HNRNPH3
TINAGL1
RCOR1
PCDHB13
RFFL
PAIP2
BLOC1S4
ARHGEF37
DERA
SUCLA2
GRHL2
PTGS1
PYDC5
IFI16
EGFR
KLHL5
KLF17
IREB2
ELOVL5
ZNF506
TLE3
DPPA2
PRR5L
DNM1L
SDHD
TBC1D17
AKT1S1
PROM1
TUT7
DDX5
ATAD2
DNM2
INTS9
HMBOX1
AFAP1
RIMKLB
C6orf132
ZBTB18
BCL9
CCNG2
ZBTB26
SNX27
RBMX
PAG1
HNRNPUL1
YWHAG
PDE4B
G3BP2
CCDC146
TTF2
FAM220A
KIF21A
LOC389199
RPL15
IFTAP
MS4A12
HEXIM1
LTBP1
COPS7A
RAP1A
MIDN
TBC1D31
POU2F1
USP53
TSPAN19
LRRIQ1
SLC2A4
BTBD3
ZNF180
SHROOM3
NUFIP2
PACRGL
ZNF250
RAB34
PWWP3A
PNRC1
CHD8
BCAT1
CTH
CDH6
SPRING1
RNFT2
RBBP9
CHMP7
LDB1
RAB4B
TAX1BP3
PAXBP1
EMC6
RABGAP1L
CALR3
C19orf44
HOXA9
KMT5C
SMARCA2
ZSCAN31
PHLDB2
MRPS30
FEM1A
ARHGAP24
HNRNPC
FZD1
UBTD2
EIF1AX
ADGRA1
SALL2
RGS12
C2CD4D
LNX1
MCM7
AP4M1
RAPGEF5
FAM76B
CEP57
H4C9
MAP1B
MRGPRX3
PTX3
TMX2
RTRAF
MED19
TRIB1
UBR2
HES6
IPO4
SERPINB6
OR13C2
GBA
TBC1D10B
OLIG3
NARF
MYLPF
PEX11G
PLEKHA5
KIAA1522
ERV3-1-ZNF117
ERV3-1
PGM2L1
MAST4
GTF2H4
NUP214
COX8A
ETFDH
C4orf46
ZSCAN10
OGT
BAZ2A
ZNF84
MAD2L1BP
GTPBP2
TMEM132A
YIPF3
POLR1C
CYP4F11
KCNMB2
TSTD2
NCBP1
CCPG1
C15orf65
ARHGEF19
ZNF474
ACSBG2
DDX31
TPCN1
IQCD
RPUSD4
FAM118B
SAPCD2
PBX1
CRISPLD1
XAB2
CITED2
ZBED5
SMC4
IFT80
DPP4
KANSL1L
TSPAN13
GID4
ATPAF2
FMNL3
MTUS1
ZNF3
ZNF101
MEIG1
PQBP1
TIMM17B
NELFCD
VAPB
TCF20
TAL1
SLAIN1
KXD1
KCTD6
ITGB8
IFT27
BTG1
GOLPH3L
CCL26
GRIN3A
ANKRD65
SLC4A2
NR2F1
CDK5
MCTS1
EXOSC2
FAM102A
CLIP1
RNF44
LIFR
SLC35G4
TCF7L2
IGF1
FGF19
APH1A
ZNF273
PPP1R15A
RBP1
CPSF4L
MMRN1
CCAR1
RFX1
IGSF9
RND1
SRPRA
HNRNPL
FOXN3
PLEKHG2
CHMP4B
CCDC171
TBC1D9
NEMF
LYSMD3
USP54
MEGF9
CDK16
PRTFDC1
SEL1L
GPBP1
MAP2
NLGN1
QPRT
BPNT2
ZNF335
FNBP1L
CPA5
CD300LB
ZNF593
C1orf232
STAU2
ACTR2
GRAMD2B
NDUFS7
CCDC172
BSDC1
ILF2
ZNF292
GGH
RGSL1
CBX1
PRDM14
BMPR2
SCNN1A
ST7
ZBTB20
PRKRIP1
KMT5A
ZNF85
ZSCAN12
SPEM1
CLPB
ADD2
RBPJ
ZNF576
IRGQ
RAB5C
HIP1
TTC39B
DOCK9
NCOA4
APPL2
ZHX3
ZNF8
PTPN12
ZIK1
SPTBN1
ZNF268
LMAN2L
RAI14
DDX20
SEPTIN9
OXNAD1
DPH3
NTMT1
NODAL
ZSCAN18
WTAP
SOD2
SLC4A7
UBE2T
SUFU
PTPRD
MTHFD1
TOMM40L
TGIF1
ERICH6B
SMC3
MTDH
METTL9
WDR33
DSE
ZNF277
DOCK4
CIAO2A
ABLIM1
TSPYL4
EIF3F
LRRC23
NEK2
INSYN2B
MAPK14
ZBTB38
REEP6
PCSK4
LDAH
DACH2
ICE1
ENOX2
NDUFB4
CDK5RAP2
FXR1
LGR6
IGDCC3
XPC
LSM3
EID3
NCLN
KBTBD2
DYNLL1
NME7
BLZF1
SLC3A2
RIOX1
CLIC1
RBM47
VMP1
PTRH2
CENPA
CPNE2
KDELR2
ZNF548
PIK3CA
NDE1
CX3CL1
LMO4
ZNF737
FEZ2
ANK3
HLCS
RIPOR3
MYO1B
TTI2
TMEM220
EFCAB8
DCLRE1C
C16orf78
DDA1
MEA1
KLHDC3
UFSP2
INTS12
GSTCD
RAB11B
NUBP1
ING4
ZNF286A
WLS
GNA12
DAOA
CHD7
SLC25A25
CABYR
SLC7A11
ARHGAP18
RRAGD
GREB1
EIF4A2
LTBR
MCM10
ANXA11
BEST3
TAGLN3
PTPRK
NSMCE4A
MLEC
CCDC124
TRIM38
ODF2
AP3M2
ZFAND6
NRL
DCAF11
PBDC1
MFSD6
ACYP2
NIN
ZNF92
GJA1
NSUN6
ARL5B
PRCC
CNIH4
RAD23B
GPR137
EMID1
EVI5L
SYNGR4
GLI2
ARMC3
ZFHX2
DAAM1
HAS3
ABCA1
CLCN5
BAZ1B
VPS50
HEPACAM2
KHDRBS1
FRAT1
RBM22
ZMAT2
C3orf20
ADPGK
ZNF668
GHITM
KIF3C
BAMBI
SLC6A9
HNRNPAB
PTP4A1
C12orf57
AGPAT1
ZNF197
NAIF1
MRPS15
HK2
PANK2
DDX59
DYRK1B
EXOSC5
BCKDHA
KDM1A
ZNF524
CAMKV
PARP2
KNL1
RTN4
CCDC174
ATOH1
GBF1
RPA2
WARS1
BEND3
SLC35G3
ADGRL2
ZNF253
PPP1R2
TMEM33
SPPL2B
LSM7
APC2
ALPL
SLC12A7
NOL4
SOX15
FBRS
FAM169A
ANP32E
ITFG2
FGF1
USPL1
EIF4E3
WDPCP
VCPKMT
CCNJ
ASF1A
APBA2
PCBP2
CELF2
CDC5L
DCSTAMP